prot_L-elsbetiae_contig199.5960.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig199.5960.1
Unique Nameprot_L-elsbetiae_contig199.5960.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length473
Homology
BLAST of mRNA_L-elsbetiae_contig199.5960.1 vs. uniprot
Match: D8LRP1_ECTSI (Letm1 RBD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRP1_ECTSI)

HSP 1 Score: 541 bits (1393), Expect = 1.040e-187
Identity = 299/481 (62.16%), Postives = 352/481 (73.18%), Query Frame = 0
Query:    1 MRIGDSVVAVNIIALASISCGEASPAAGWGATMKAAASSSRERLGCDRRVFSGRHTH--SCSTLAFLGRRPRTTTTKGAAGPEEES-VGALSSAAALEAPDVGGEAAASAGSLV------AETAEPGFAQGVVTTFREFWGGAKDGTVALWTNFQISQDIRKRVKAGHVMTYAEHAHLERGSNDRRKLLQYVIAYAVSPKNFVYVVWYVPGLLPSTFEKPHTVRANYHRLALDRATATLEGLAGLENRILKADAAFKGKPRKAGSRPAKKIEKLEMQREKVVSILEAGSKREVFEKFQEHMVVPAPA---PXXXXXXXXXXXXXXXXXKPQQLKLPPAGQGIPGPAIKAIGKGTGLSGWWHIAPSFYVRFCLSERLRELGKMDDVLRKAPLDSLSDRDLREACNARAIDVGNHFGGDNDPEELRRSLGEWLELTSAEVAAGSRLGPDAVFLPDRARLLGLGLNCLESSRQGRTAELSRKAL 469
            MR+ + +  +N+ A+A    G A    GWG+   A  S        DRRVF+ RH    S S +AF GRRPRT+T +     E  S V AL  A+   A  V G  AA+  S        A       AQG+V TFR+FWG A+DGT ALW NF+ SQDIRKRVKAGHVMTYAEHAHLERG+ DRRKLLQY+IAYAVSP+NFVYVVWYVPGLLPSTF KPHT+R+ YHRLAL+RA+AT + + GLE R+LKA+  FKGKPR+ GSR +KK+EKLE QRE V+ +LEA SKR+VFE+FQEHMVV APA   P                 KPQ+LKLPPA +G+P   IK +GKGTGLSGWWH++P FYVR+CLSERLR+LGKMDDVLR   L+SLSD DLREAC+ARAI+VGN  GGD +P++LR+SLGEWL+LTS EVAAGS+LGPD VFLPDRARLLGLGLNCLES+RQGRTAEL RKAL
Sbjct:    1 MRLSEFLSVLNLAAVAQGGHGTA----GWGSKSAAVVS--------DRRVFNDRHRQPQSRSAVAFFGRRPRTSTPRVTGSSEAGSAVDALPDASGAGANGVRGSPAAADTSSXXXXXDSAAAPRVSAAQGIVNTFRDFWGHARDGTFALWGNFKTSQDIRKRVKAGHVMTYAEHAHLERGATDRRKLLQYLIAYAVSPQNFVYVVWYVPGLLPSTFVKPHTIRSKYHRLALERASATWDAVTGLEFRLLKAEEGFKGKPREEGSRQSKKMEKLERQREMVLDVLEADSKRQVFERFQEHMVVSAPASPDPENTAASNNKGTTKSKKPKPQKLKLPPASKGVPNAYIKTLGKGTGLSGWWHVSPGFYVRYCLSERLRDLGKMDDVLRTVSLESLSDSDLREACDARAINVGNRLGGDREPQDLRKSLGEWLDLTSPEVAAGSKLGPDTVFLPDRARLLGLGLNCLESARQGRTAELPRKAL 469          
BLAST of mRNA_L-elsbetiae_contig199.5960.1 vs. uniprot
Match: A0A6H5L818_9PHAE (LETM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L818_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 1.040e-41
Identity = 70/108 (64.81%), Postives = 91/108 (84.26%), Query Frame = 0
Query:  330 IPGPAIKAIGKGTGLSGWWHIAPSFYVRFCLSERLRELGKMDDVLRKAPLDSLSDRDLREACNARAIDVGNHFGGDNDPEELRRSLGEWLELTSAEVAAGSRLGPDAV 437
            +P   I+A+GKGTGLSGW HI+P FYVR+CLSERLR+LG+M ++LR   L+SLSD DLREAC+ARAI+VGN  GGD +P++LR+ LG WL+LTS EV+AGS+L PD++
Sbjct:   63 VPNAYIEALGKGTGLSGWCHISPGFYVRYCLSERLRDLGRMIEILRTVSLESLSDSDLREACDARAINVGNRLGGDREPQDLRKPLGGWLDLTSPEVSAGSKLDPDSL 170          
BLAST of mRNA_L-elsbetiae_contig199.5960.1 vs. uniprot
Match: A0A836CMC6_9STRA (LETM1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMC6_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.850e-34
Identity = 109/350 (31.14%), Postives = 162/350 (46.29%), Query Frame = 0
Query:  123 VVTTFREFWGGAKDGTVALWTNFQISQDIRKRVKAGHV--MTYAEHAHLERGSNDRRKLLQYVIAYAVSPKNFVYVVWYVPGLLPSTFEKPHTVRANYHRLALDRATATLEGLAGLENRILKADAAFKGKPRKAGSRPAKKIEKLEMQREKVVSILEAGSKREVFEKFQEHMVVPAPAPXXXXXXXXXXXXXXXXXKPQQLKLPPAGQGIPGPAIKAIGKGTGLSGWWHIAPSFYVRFCLSERLRELGKMDDVLRKAPLDSLSDRDLREACNARAIDVGNHFGGDNDPEELRRSLGEWLELTSAEVAAGS-RLGPDAVFLPDRARLLGLGLNCLESSRQGRTAELSRKAL 469
            V  +FR F    K G    W +FQ  + IR+R++A     +TY E   L+RG  DR KLLQ  + +   P+   +V+ ++PG++PSTFE        +      R  A L  L  ++   L              ++  KK  +    RE  V +++A +  + F  F+ H     PA                  +  + + P   +G+PGP  K + K  GL   W   P+F  R  L E LR++   D VL + PLD+L  R+LREA  ARA+D  +      D  ELRR L EWL LT A +       G + VF+P+RA+   L +N + S+R  R +EL +  L
Sbjct:   24 VKDSFRRF----KAGMTGQWDSFQRCKAIRERLRAPGAAPVTYEEFMALQRGKEDRNKLLQVGVVWVAVPEAIPFVLSFLPGVIPSTFENDADRAQRFRNFNAARVRAALALLDTVDKECL--------------NKNEKKRVEFAQYREAAVRVMKAHTCEDAFGVFEAHTFALVPA-----------DTDAQQRRRARPRPPTTVEGMPGPLAKGLAKALGLCTPW--MPAFLCRGPLREHLRKVAAGDAVLARTPLDALRGRELREAACARALDAAHP-----DERELRRRLAEWLRLTGAPLGVDDCDAGAERVFVPERAKAAMLAVNVVASARAARESELPKLLL 337          
BLAST of mRNA_L-elsbetiae_contig199.5960.1 vs. uniprot
Match: B7FW20_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FW20_PHATC)

HSP 1 Score: 66.2 bits (160), Expect = 5.820e-8
Identity = 91/364 (25.00%), Postives = 152/364 (41.76%), Query Frame = 0
Query:  136 DGTVALWTNFQISQDIRKR----------------------------VKAGHVMTYAEHAHLERGSNDRRKLLQYVIAYAVSPKNFVYVVWYVPGLLPSTFEKPHTVRANYHRLALDRATATLEGLAGLENRILKADAAFKGKPRKAGSRPAKKIEKLEMQREKVVSILEAGSKR------EVFEKFQEHMVVPAPAPXXXXXXXXXXXXXXXXXKPQQL-KLPPAGQGIPGPAIKAIGKGTGLSGWW-HIAPSFYVRFCLSERLRELGKMDDVLRKAPLD--SLSDRDLREACNARAIDVGNHFGGDNDPEELRRSLGEWLELTSAEVAAGSRLGPDAVFLPDRARLLGLGLNCLESSRQGRT 461
            DG   LWTN +    IR +                            V+AG  + Y E+  L++G  DR KL+  V     +P+   Y + + P +LPS F  P    +   + +  R+TA LE L  LE +  KA  A        G +   K+  +    E+V S L + S +       V ++   ++ +P                     K ++L  +PP         IK +G   G +G++  ++P+F  R  +   ++++   D  L +A +D  ++S R L+EAC+ R I  GN     + P+EL+  L  WL L   E A    +     F  + AR   +G + L+++R GR+
Sbjct:   91 DGCGQLWTNHKTCNTIRAKLQHHRDDLAKTPPYARMELKERKKALSAVEAG--IEYEEYMFLQKGKEDRGKLMNVVFLMWGAPRFLPYALMFNPEMLPSPFLSPGP-ESVLEKKSRQRSTAVLECLLQLEQQA-KAVPALSKLNIFGGKKQQVKMNAMHTFNERVASFLISSSCQGHEGASRVLQEIGAYLYLPV--------DEDAPDRGDFSRKAKRLCDVPPT-------VIKGLGSAIGNAGFFASVSPNFLNRGKILGHVKKIADADHFLVQANIDLTTISWRLLQEACSDRLI--GNAA---STPDELQSMLSSWLRLVVYEPAKHDSMH----FNSNLARTSLMGYHALQATRDGRS 426          
BLAST of mRNA_L-elsbetiae_contig199.5960.1 vs. uniprot
Match: A0A1Z5JSS5_FISSO (LETM1 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSS5_FISSO)

HSP 1 Score: 59.7 bits (143), Expect = 5.670e-6
Identity = 76/307 (24.76%), Postives = 128/307 (41.69%), Query Frame = 0
Query:  135 KDGTVALWTNFQISQDIRKRV--KAGHV---MTYAEHAHLERGSNDRRKLLQYVIAYAVSPKNFVYVVWYVPGLLPSTFEKPH-----TVRANYHRLALDRATATLEGLAGLENRILKADAAFKGKPRKAGSRPAKKIEKLEMQREKVVSILEAGSKREVFEKFQEHMVVPAPAPXXXXXXXXXXXXXXXXXKPQQLKLPPAGQGIPGPAIKAIGK---GTGLSGWWH-IAPSFYVRFCLSERLRELGKMDDVLRKAPLD--SLSDRDLREACNARAIDVGNHFGGDNDPEELRRSLGEWLELTSAE 425
            +DG +  W + Q + + RK +  KA  +   +++ ++  L++G  DR K+L  V     +P+   Y +W+ P LLPSTF+        T      R A +R  + L  LA LE R  K  AA        G   +  +     ++ K  +++       V+ + +  ++ P                     + +Q  +     G+P   +K + +   G   SG  + + P F VR      LR++   DD L +A +D  S+  + L E C  R +     +G  N   ELR  L EWL +T  E
Sbjct:   63 RDGCIERWES-QGAPETRKELQKKASSIQGGISFDDYIFLQKGKEDRGKVLNMVFLMWGAPRFLPYALWFNPDLLPSTFKNDAANADTTYETTAQRFARERTVSILSTLANLE-RQAKTQAA-------GGFLSSLNVLGGSAKKNKQTTLVA------VYNQTKSLLMNPLQQEDIMQPFRSLVYKNEPFTRAEQKLV-----GVPSCIVKGLNQAISGKPASGILNQLTPHFLVRGAFVNHLRKVSDTDDFLVQAGIDLESIPSKLLHETCRERML-----YG--NCDTELRAQLHEWLSVTQPE 342          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig199.5960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LRP1_ECTSI1.040e-18762.16Letm1 RBD domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5L818_9PHAE1.040e-4164.81LETM1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CMC6_9STRA1.850e-3431.14LETM1 domain-containing protein n=1 Tax=Tribonema ... [more]
B7FW20_PHATC5.820e-825.00Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5JSS5_FISSO5.670e-624.76LETM1 domain-containing protein n=2 Tax=Fistulifer... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011685LETM1-likePFAMPF07766LETM1coord: 126..240
e-value: 3.5E-8
score: 33.1
coord: 349..426
e-value: 4.4E-11
score: 42.6
NoneNo IPR availablePANTHERPTHR14009LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEINcoord: 115..423
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..472
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..20
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.482
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR033122Letm1 ribosome-binding domainPROSITEPS51758LETM1_RBDcoord: 252..472
score: 10.006

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig199contigL-elsbetiae_contig199:16663..21362 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig199.5960.1mRNA_L-elsbetiae_contig199.5960.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig199 16637..21838 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig199.5960.1 ID=prot_L-elsbetiae_contig199.5960.1|Name=mRNA_L-elsbetiae_contig199.5960.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=473bp
MRIGDSVVAVNIIALASISCGEASPAAGWGATMKAAASSSRERLGCDRRV
FSGRHTHSCSTLAFLGRRPRTTTTKGAAGPEEESVGALSSAAALEAPDVG
GEAAASAGSLVAETAEPGFAQGVVTTFREFWGGAKDGTVALWTNFQISQD
IRKRVKAGHVMTYAEHAHLERGSNDRRKLLQYVIAYAVSPKNFVYVVWYV
PGLLPSTFEKPHTVRANYHRLALDRATATLEGLAGLENRILKADAAFKGK
PRKAGSRPAKKIEKLEMQREKVVSILEAGSKREVFEKFQEHMVVPAPAPP
TAQEEEAAAKKKKKKPKPQQLKLPPAGQGIPGPAIKAIGKGTGLSGWWHI
APSFYVRFCLSERLRELGKMDDVLRKAPLDSLSDRDLREACNARAIDVGN
HFGGDNDPEELRRSLGEWLELTSAEVAAGSRLGPDAVFLPDRARLLGLGL
NCLESSRQGRTAELSRKALFRE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011685LETM1
IPR033122LETM1_RBD