prot_L-elsbetiae_contig1981.5919.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1981.5919.1
Unique Nameprot_L-elsbetiae_contig1981.5919.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length511
Homology
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BLAST of mRNA_L-elsbetiae_contig1981.5919.1 vs. uniprot
Match: A0A7S2XIH3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIH3_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 5.950e-8
Identity = 58/233 (24.89%), Postives = 99/233 (42.49%), Query Frame = 0 
Query:  292 GDTVVARAVIAFRDATGWASLGPTVQSIEVRRDYQGSGLVQDLFNAI-----ERWFVKFWTLDSQQGWRCLKATQLQDYVVDRYPIVEGDDPAEEDHVLTDKKFMYEVMQFSSNYPNPTDPLGQLGSDVSPETHAVKLYPPT-----------GAEVPMPTVAYPRFAAAQGWRSCDNCRTPEEDLPGS--SLLVCGGCTPPNYWRAHYCGRECQREHWDIHKLSCGKSYDQV 506
            G   +AR  +++ D +   S+GPT++ + V++  +G G+++ L++ +     E + ++    D+  G   +KATQL    V+       D+ +     ++DK F ++ + FS             G    P+     +Y P            G     PT    +     G + C+ CR       GS   L  C  C   + W   YCGRECQ+  W IHK+ CGK   ++
Sbjct:  203 GSEEIARCHLSYTDGSFDPSMGPTIEQMVVKQSKRGFGILKLLWHWVRCFVEENFRIECLNNDAPLGHIMVKATQLTGAEVEIRTRKNCDNIS-----VSDKDFFFKYLGFSVKEQKGIMAAMMAGGSGRPQDEEAVIYIPLLSPAEHVIRARGGRGDEPTRMDGKMKKQHGNKVCERCRK-----AGSRDELSACAQCK--SVW---YCGRECQKSDWKIHKVWCGKDAHEL 420
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BLAST of mRNA_L-elsbetiae_contig1981.5919.1 vs. uniprot
Match: UPI001B85D20E (uncharacterized protein n=1 Tax=Suillus subalutaceus TaxID=48586 RepID=UPI001B85D20E)

HSP 1 Score: 60.1 bits (144), Expect = 6.110e-6
Identity = 23/52 (44.23%), Postives = 32/52 (61.54%), Query Frame = 0 
Query:  451 CDNC-RTPEEDLPGSSLLVCGGCTPPNYWRAHYCGRECQREHWDIHKLSCGK 501
            C+NC +TPE+   G   +VC  C     +  HYC + CQ++HW +HK SCGK
Sbjct:  269 CENCTKTPEDIGQGVRFMVCSVCKTKLKFEVHYCSQSCQKDHWSVHKKSCGK 320
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1981.5919.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S2XIH3_9STRA5.950e-824.89Hypothetical protein n=1 Tax=Attheya septentrional... [more]
UPI001B85D20E6.110e-644.23uncharacterized protein n=1 Tax=Suillus subalutace... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.60.180coord: 448..502
e-value: 2.5E-10
score: 42.1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..511
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 448..501
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 451..499
e-value: 3.4E-8
score: 33.4
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 451..499
score: 9.408

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1981contigL-elsbetiae_contig1981:1658..6552 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1981.5919.1mRNA_L-elsbetiae_contig1981.5919.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1981 1179..6552 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1981.5919.1 ID=prot_L-elsbetiae_contig1981.5919.1|Name=mRNA_L-elsbetiae_contig1981.5919.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=511bp
MTLAKRFKLGLGSCLGHSSASPSADIPEETKDKEKTPKKPYDFSKHPEHT
AWRLAAAAAAGSRHRPAPEDALVPWSHAAAAEGATSEVCTLDPAPGAGLS
TLFLRTTLSPASLAKRLNADFFDDSKLSVKDTGGGDKEGSKKKGKSSEEA
PTPGKNKTPTAVALAPEGGGAPPLVIEEAPGSFMYGPVVALTSTNADAQE
TLEHLESIFPTGYAAILPHNRMETNVRTVKGNTRLTTRTGMQRVASSAKD
DKKAKGKTATPSAKSLATIFELELDRARRFDSPAGHPPHTAGDTVVARAV
IAFRDATGWASLGPTVQSIEVRRDYQGSGLVQDLFNAIERWFVKFWTLDS
QQGWRCLKATQLQDYVVDRYPIVEGDDPAEEDHVLTDKKFMYEVMQFSSN
YPNPTDPLGQLGSDVSPETHAVKLYPPTGAEVPMPTVAYPRFAAAQGWRS
CDNCRTPEEDLPGSSLLVCGGCTPPNYWRAHYCGRECQREHWDIHKLSCG
KSYDQVCAGKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND