mRNA_L-elsbetiae_contig1979.5907.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1979.5907.1
Unique NamemRNA_L-elsbetiae_contig1979.5907.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1979.5907.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 5.250e-31
Identity = 161/305 (52.79%), Postives = 199/305 (65.25%), Query Frame = 1
Query:  190 PRGPSNALHKAAFHGSKKSTLSLL-SNSSIDINQGCEDGSTPLILASWIGCSGVVRALLDAGADLSI-KKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLRGQADPLLEFTNQESGETYVPLDTAAIYGHSEVVQELLQRVGIGGCGGASDGLNAFRIASMHQRLEMMAMLADAGVVDTGEALLDAAEHGHEAAARYLVKRF------GRVATYV-DARDAKDRTPLMLSIVGCAPS---SPRIVR 1068
            PRGP N LH+AA  GS +  ++LL S SSI I+ G E G TPL+LA+W G S VVR LL+ GA++S+  +                   XXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   R +A+PLL      SG T+VPLDTAA YG +EVV+EL+++V I GCGGAS G+ A R+A++ Q +++M++LADAGV+DTGEAL+ AA    EA  + L+++       G +  YV D  D   RTPL+ SI G       SPR+VR
Sbjct:   12 PRGPQNDLHRAANDGSVERVVALLASRSSIAIDAGAEYGWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXXXXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTP-SGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGTSAGGELYMYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVR 315          
BLAST of mRNA_L-elsbetiae_contig1979.5907.1 vs. uniprot
Match: D8LNF8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF8_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 9.650e-30
Identity = 127/260 (48.85%), Postives = 158/260 (60.77%), Query Frame = 1
Query:  190 PRGPSNALHKAAFHGSKKSTLSLL-SNSSIDINQGCEDGSTPLILASWIGCSGVVRALLDAGADLSI-KKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLRGQADPLLEFTNQESGETYVPLDTAAIYGHSEVVQELLQRVGIGGCGGASDGLNAFRIASMHQRLEMMAMLADAGVVDTGEALLDAAEHGHEAAARYLVKR 963
            PRGP N LH+AA  GS +  ++LL S  SIDINQG E G TPL+LA+W G S VVR L + GA++S+                                                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   R +A+PLL      SG T+VPLDTAA YG +EVVQEL+Q+V I GCGGAS G++A R+A++ Q +++MA+LAD GV+DTGEAL+ AA    EA  + L+++
Sbjct:   12 PRGPQNDLHRAANDGSIERVVALLASRPSIDINQGAEYGWTPLMLAAWRGSSRVVRILPNKGANVSVVADDFHTALHFSTQDGGHPVVTKMLLKAGADFEAVTSEGETPLHLVADSGCWEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTS-SGVTFVPLDTAAEYGQTEVVQELVQQVSIKGCGGASGGVDALRLAALSQNVDVMAVLADVGVMDTGEALITAAGRNDEAGVKLLLQQ 270          
BLAST of mRNA_L-elsbetiae_contig1979.5907.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 1.380e-26
Identity = 181/296 (61.15%), Postives = 208/296 (70.27%), Query Frame = 1
Query:  193 RGPSNALHKAAFHGSKKSTLSLLSNSSIDINQGCEDGSTPLILASWIGCSGVVRALLDAGADLSIKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLRGQADPLLEFTNQESGETYVPLDTAAIYGHSEVVQELLQRVGIGGCGGASDGLNAFRIASMHQRLEMMAMLADAGVVDTGEALLDAAEHGHEAAARYLVKRFGRVA---TYVDA-RDAKDRTPLMLSIVGCAPSSPRIVR 1068
            RGP N LHKAA  GS + T SLL+   IDI+QG   G TPL+ A+  G S V++ LL+ GA L        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        PLL  T   SG T+VPLD AA+ GH  V +EL+QR GI GC GAS G++A   A++ Q L++MA+L DAGVVDTG AL+     G E A ++L+++ G      TY    RD +  TPL LS V   P SPR+VR
Sbjct:    9 RGPRNELHKAALDGSSQRTESLLAGGRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLP-TRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPL-LSAVTTGPCSPRVVR 302          
BLAST of mRNA_L-elsbetiae_contig1979.5907.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 1.940e-26
Identity = 103/296 (34.80%), Postives = 147/296 (49.66%), Query Frame = 1
Query:  205 NALHKAAFHGSKKSTLSLLSNSSIDINQGCEDGSTPLILASWIGCSGVVRALLDAGADLSI--KKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLRGQADPLLEFTNQESGETYVPLDTAAIYGHSEVVQELLQRVGIGGCGGASDGLNAFRIASMHQRLEMMAMLADAGVVDTGEALLDAAEHGHEAAARYLVKR------FGRVATYVDARDAKDRTPLMLSIVGCAPSSPRIVR 1068
            N LH+A   GS + T ++L+  +++I+Q    G+TPL++A   G S + + L+  GA++SI  K+                                               XXXXXXXXXXXXX                           LLRG A+PLL  T+     T VPLD AA +GH++VV+EL+Q +GI GC   S G +A   A+ +Q L++MA+L +AGVVDTG+AL  AA  GHEA+ ++L++        G    Y++ARD    TPL++   GC   +PRIVR
Sbjct:  107 NQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVR 402          
BLAST of mRNA_L-elsbetiae_contig1979.5907.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 9.500e-25
Identity = 185/298 (62.08%), Postives = 228/298 (76.51%), Query Frame = 1
Query:  193 RGPSNALHKAAFHGSKKSTLSLLSNSSI-DINQGCEDGSTPLILASWIGCSGVVRALLDAGADLSIKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLRGQADPLLEFTNQESGETYVPLDTAAIYGHSEVVQELLQRVGIGGCGGASDGLNAFRIASMHQRLEMMAMLADAG-VVDTGEALLDAAEHGHEAAARYLVKRFGRVA-TYVDA-RDAKDRTPLMLSI-VGCAP-SSPRIVR 1068
            RGP NALHKAA+ GS + T ++LS+    DI+ G    +T L++A+  G +GVV ALL  GA++S   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLR +A+PLL  ++   G +YVPL+ AA++G+ +V +E++++VGI GCGG S G+ A R A+  + LE MA+L DAG VVDTG AL+ AAE+G   A ++L++R    A  YV+  RD   RTP+M ++ VG     SP+IVR
Sbjct:    9 RGPMNALHKAAWDGSVEMTGAILSSRGAPDIDLGNPSAATALMIATVKGYAGVVNALLSKGANVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLRAKANPLL-CSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVR 305          
BLAST of mRNA_L-elsbetiae_contig1979.5907.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.120e-24
Identity = 120/292 (41.10%), Postives = 158/292 (54.11%), Query Frame = 1
Query:  190 PRGPSNALHKAAFHGSKKSTLSLLSNSSIDINQGCEDGSTPLILASWIGCSGVVRALLDAGADLSIKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VLLRGQADPLLEFTNQESGETYVPLDTAAIYGHSEVVQELLQRVGIGGCGGASDGLNAFRIASMHQRLEMMAMLADAGVVDTGEALLDAAEHGHEAAARYLVKRF-GRVAT----YVDARDAKDRTPLMLSIVGCAP 1047
            P GPSN L  AA  GS K+  +LL++ + DI+QG E G TPL++AS  G   +VR LL+ GA + +  XXXXXXXXXXXXXXXXXXXXXXXXXX                                                             +LL  +ADPLL   +    E ++PLD AA  GH EVV EL+++VGI GCGG+S G NA R A++  RL++MA+L DAGVVDTG AL+ AA +G EA  ++L+++  GR +T    Y++  +    T L+  I  C P
Sbjct:   11 PHGPSNPLQAAADCGSFKTAANLLASGAFDIDQGNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCRP 302          
BLAST of mRNA_L-elsbetiae_contig1979.5907.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 1.290e-24
Identity = 145/299 (48.49%), Postives = 184/299 (61.54%), Query Frame = 1
Query:  190 PRGPSNALHKAAFHGSKKSTLSLLSNSSIDINQGCEDGSTPLILASWIGCSGVVRALLDAGADLSIKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VLLRGQADPLLEFTNQESGETYVPLDTAAIYGHSEVVQELLQRVGIGGCGGASDGLNAFRIASMHQRLEMMAMLADAGVVDTGEALLDAAEHGHEAAARYLVKRFGR-----VATYVDARDAKDRTPLMLSIVGCAPSSPRIVR 1068
            PRGPSN LH AA  GS ++T ++L++ + DI+QG E G T L+LAS  G + +V  +L+ GA +SI  XXXXXXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXX                          +LL  +ADPLL      SG T++PLD AA  GH EVV EL+++VGI GCGG+S G+ A + A+  + L +M +L +AGVVDTG AL+ AA +G E   ++L+++         A YV+ RD    TPL+    G     PR+VR
Sbjct:   11 PRGPSNRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLW---GIQHYRPRVVR 306          
BLAST of mRNA_L-elsbetiae_contig1979.5907.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.300e-23
Identity = 171/283 (60.42%), Postives = 207/283 (73.14%), Query Frame = 1
Query:  226 FHGSKKSTLSLLSNSSIDINQGCEDGSTPLILASWIGCSGVVRALLDAGADLSIKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLRGQADPLLEFTNQESGETYVPLDTAAIYGHSEVVQELLQRVGIGGCGGASDGLNAFRIASMHQRLEMMAMLADAGVVDTGEALLDAAEHGHEAAARYLVK-RFGRVATYVD-ARDAKDRTPLMLSIVGCAPSSPRIVR 1068
            +HGS     +LLS  S+DINQG   G TPL+LA   G S V ++LL  GA++S+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +A+ LL      SG T+VPLD A  +GHSEVV+EL  ++G+ GCGG S G+ + R+A+  Q +++M +L   GVVDTG AL+ AAE+  E + ++L++ + G  A YV+   D   RTPL+ +I  C  SSPRI R
Sbjct:    8 YHGSADRVDALLSMGSVDINQGNPKGWTPLMLAVEKGLSRVTKSLLGKGANVSVVGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGGGAWYVNNTLDPFGRTPLVCTIEACGSSSPRIAR 290          
BLAST of mRNA_L-elsbetiae_contig1979.5907.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 4.660e-21
Identity = 173/296 (58.45%), Postives = 211/296 (71.28%), Query Frame = 1
Query:  190 PRGPSNALHKAAFHGSKKSTLSLLSNSSIDINQGCEDGSTPLILASWIGCSGVVRALLDAGADLSIK-KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLRGQADPLLEFTNQESGETYVPLDTAAIYGHSEVVQELLQRVGIGGCGGASDGLNAFRIASMHQRLEMMAMLADAGVVDTGEALLDAAEHGHEAAARYLVK-RFGRVATYVD-ARDAKDRTPLMLSIVGCAPSSPRIVR 1068
            PRGP+N LHKAA+HGS     +LLS  S+DINQG   G TPL+LA+  G S V ++LL+ GA++S+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  L+ Q                        +GHSEVV+EL+Q++G+ GCGG S G+ + R+A+  Q +++M +L   GVVDTG AL+ AAE+  E + ++L++ + G    YV+   D   RTPL+ +I  C  SSPRI R
Sbjct:   29 PRGPTNQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSLVAKSLLEKGANVSVAGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQKQ------------------------HGHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTWYVNNTLDPFGRTPLVCTIEACGSSSPRIAR 300          
BLAST of mRNA_L-elsbetiae_contig1979.5907.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 103 bits (256), Expect = 7.610e-21
Identity = 147/297 (49.49%), Postives = 178/297 (59.93%), Query Frame = 1
Query:  205 NALHKAAFHGSKKSTLSLLSNSSIDINQGCEDGSTPLILASWIGCSGVVRALLDAGADLSI-KKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLRGQADPLLEFTNQESGETYVPLDTAAIYGHSEVVQELLQRVGIGGCGGASDGLNAFRIASMHQRLEMMAMLADAGVVDTGEALLDAAEHGHEAAARYLV----KRFGRVATYVDARDAKDRTPLMLSIVGCA----PSSPRIVR 1068
            N+LH AAF GS + T  LL+  S DINQG  +  TPLI A+ +G S V+  LL  GA++SI           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                            LLR  A+PL+    +    T +PLD+AA  G+  V++EL+QRVGI GCGG S G  A  +A   +R+  MA+L  AGVVDTG+AL  +A  G EA+ +YL+    K +G  A YV+ RD    TPL+ SI  C      S PR+ R
Sbjct:    2 NSLHDAAFKGSTERTAELLATGSWDINQGTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLI---TRAPLPTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPGA-YVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVAR 294          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1979.5907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL33_9PHAE5.250e-3152.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNF8_ECTSI9.650e-3048.85EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LL76_ECTSI1.380e-2661.15EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FT11_ECTSI1.940e-2634.80EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7G1H7_ECTSI9.500e-2562.08EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
A0A6H5KQV0_9PHAE1.120e-2441.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJA9_9PHAE1.290e-2448.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K037_9PHAE1.300e-2360.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1U9_ECTSI4.660e-2158.45EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LJF9_ECTSI7.610e-2149.49EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1979contigL-elsbetiae_contig1979:15414..16481 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score130.6
Seed ortholog evalue1.2e-27
Seed eggNOG ortholog2880.D8LNF8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
Ec32 ortholog descriptionEsV-1-199
Ec32 orthologEc-07_003230.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionEsV-1-199-related ankyrin repeat protein
Ec32 orthologEc-24_003360.1
Exons1
Model size1070
Cds size891
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815819.1728227-UTR-L-elsbetiae_contig1979:15413..155901622815819.1728227-UTR-L-elsbetiae_contig1979:15413..15590Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1979 15414..15590 +
1691683123.4047012-UTR-L-elsbetiae_contig1979:15413..155901691683123.4047012-UTR-L-elsbetiae_contig1979:15413..15590Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1979 15414..15590 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815819.1833723-CDS-L-elsbetiae_contig1979:15590..164811622815819.1833723-CDS-L-elsbetiae_contig1979:15590..16481Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1979 15591..16481 +
1691683123.416009-CDS-L-elsbetiae_contig1979:15590..164811691683123.416009-CDS-L-elsbetiae_contig1979:15590..16481Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1979 15591..16481 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1979.5907.1prot_L-elsbetiae_contig1979.5907.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1979 15591..16481 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1979.5907.1

>prot_L-elsbetiae_contig1979.5907.1 ID=prot_L-elsbetiae_contig1979.5907.1|Name=mRNA_L-elsbetiae_contig1979.5907.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=297bp
MPPPPRGPSNALHKAAFHGSKKSTLSLLSNSSIDINQGCEDGSTPLILAS
WIGCSGVVRALLDAGADLSIKKDDDFTALLAAANNGRLAVTKILIEAGAD
LEAANCQGGTSLHMAAEEGHTAVISALVEAGAKTGSRRWDGATPLYLAVR
KGRTETVRVLLRGQADPLLEFTNQESGETYVPLDTAAIYGHSEVVQELLQ
RVGIGGCGGASDGLNAFRIASMHQRLEMMAMLADAGVVDTGEALLDAAEH
GHEAAARYLVKRFGRVATYVDARDAKDRTPLMLSIVGCAPSSPRIVR
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mRNA from alignment at L-elsbetiae_contig1979:15414..16481+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1979.5907.1 ID=mRNA_L-elsbetiae_contig1979.5907.1|Name=mRNA_L-elsbetiae_contig1979.5907.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1068bp|location=Sequence derived from alignment at L-elsbetiae_contig1979:15414..16481+ (Laminarionema elsbetiae ELsaHSoW15)
CGGGAGGGTGAGGGCAAGGAGGCTCATAGGTTACAGGGAGTTGTCAAGGA GGAGAGAGAGGACGGCAGGCGGCGCGCGTAGTGCTGCGCATGTACATCCA AACGGGGTCATCTTCCTCTTCACCCTCGCCCCATTTGGCCTCCGCCACCG TAGATCACGATCGAAAAAAAAAACGAGATGCCTCCTCCCCCGCGGGGCCC TTCCAACGCCCTGCACAAGGCTGCATTCCACGGCTCCAAAAAGAGCACGT TGTCCCTTCTCTCGAACAGCTCGATTGATATCAACCAAGGCTGCGAAGAC GGCTCGACCCCTTTAATTCTCGCCAGCTGGATCGGCTGCTCAGGCGTTGT TCGGGCCCTGCTGGACGCGGGAGCCGACTTGTCGATCAAGAAGGATGATG ACTTCACCGCTCTGCTCGCTGCGGCTAATAACGGGCGCCTAGCCGTCACA AAGATTTTGATCGAGGCAGGTGCAGACCTGGAGGCCGCTAACTGTCAGGG TGGCACATCGCTCCACATGGCGGCGGAGGAAGGACACACGGCGGTAATCA GCGCGCTAGTCGAGGCGGGTGCGAAAACCGGGAGCCGCAGGTGGGACGGG GCGACCCCGCTGTACCTTGCCGTGCGGAAAGGGCGCACGGAAACGGTCCG GGTGCTTCTGCGCGGGCAAGCGGACCCGCTGCTGGAGTTCACTAATCAGG AATCGGGAGAGACCTACGTCCCGCTGGACACCGCTGCGATATACGGGCAC TCCGAAGTGGTGCAGGAGCTACTTCAGCGGGTTGGGATCGGCGGTTGTGG CGGTGCGTCCGATGGCTTAAATGCCTTCCGCATTGCGTCGATGCATCAAC GCTTGGAGATGATGGCCATGCTGGCGGACGCTGGAGTAGTTGATACGGGT GAAGCTCTGCTCGACGCTGCCGAGCACGGCCACGAAGCAGCGGCAAGGTA CCTCGTGAAGCGGTTCGGGCGGGTGGCCACTTACGTAGACGCGCGCGACG CGAAGGACCGAACGCCTTTGATGTTGAGCATCGTGGGGTGCGCACCAAGC TCTCCCAGGATCGTGCGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1979:15414..16481+

>mRNA_L-elsbetiae_contig1979.5907.1 ID=mRNA_L-elsbetiae_contig1979.5907.1|Name=mRNA_L-elsbetiae_contig1979.5907.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1782bp|location=Sequence derived from alignment at L-elsbetiae_contig1979:15414..16481+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCCTCCTCCCCCGCGGGGCCCTTCCAACGCCCTGCACAAGGCTGCATT
CCACGGCTCCAAAAAGAGCACGTTGTCCCTTCTCTCGAACAGCTCGATTG
ATATCAACCAAGGCTGCGAAGACGGCTCGACCCCTTTAATTCTCGCCAGC
TGGATCGGCTGCTCAGGCGTTGTTCGGGCCCTGCTGGACGCGGGAGCCGA
CTTGTCGATCAAGAAGGATGATGACTTCACCGCTCTGCTCGCTGCGGCTA
ATAACGGGCGCCTAGCCGTCACAAAGATTTTGATCGAGGCAGGTGCAGAC
CTGGAGGCCGCTAACTGTCAGGGTGGCACATCGCTCCACATGGCGGCGGA
GGAAGGACACACGGCGGTAATCAGCGCGCTAGTCGAGGCGGGTGCGAAAA
CCGGGAGCCGCAGGTGGGACGGGGCGACCCCGCTGTACCTTGCCGTGCGG
AAAGGGCGCACGGAAACGGTCCGGGTGCTTCTGCGCGGGCAAGCGGACCC
GCTGCTGGAGTTCACTAATCAGGAATCGGGAGAGACCTACGTCCCGCTGG
ACACCGCTGCGATATACGGGCACTCCGAAGTGGTGCAGGAGCTACTTCAG
CGGGTTGGGATCGGCGGTTGTGGCGGTGCGTCCGATGGCTTAAATGCCTT
CCGCATTGCGTCGATGCATCAACGCTTGGAGATGATGGCCATGCTGGCGG
ACGCTGGAGTAGTTGATACGGGTGAAGCTCTGCTCGACGCTGCCGAGCAC
GGCCACGAAGCAGCGGCAAGGTACCTCGTGAAGCGGTTCGGGCGGGTGGC
CACTTACGTAGACGCGCGCGACGCGAAGGACCGAACGCCTTTGATGTTGA
GCATCGTGGGGTGCGCACCAAGCTCTCCCAGGATCGTGCGAATGCCTCCT
CCCCCGCGGGGCCCTTCCAACGCCCTGCACAAGGCTGCATTCCACGGCTC
CAAAAAGAGCACGTTGTCCCTTCTCTCGAACAGCTCGATTGATATCAACC
AAGGCTGCGAAGACGGCTCGACCCCTTTAATTCTCGCCAGCTGGATCGGC
TGCTCAGGCGTTGTTCGGGCCCTGCTGGACGCGGGAGCCGACTTGTCGAT
CAAGAAGGATGATGACTTCACCGCTCTGCTCGCTGCGGCTAATAACGGGC
GCCTAGCCGTCACAAAGATTTTGATCGAGGCAGGTGCAGACCTGGAGGCC
GCTAACTGTCAGGGTGGCACATCGCTCCACATGGCGGCGGAGGAAGGACA
CACGGCGGTAATCAGCGCGCTAGTCGAGGCGGGTGCGAAAACCGGGAGCC
GCAGGTGGGACGGGGCGACCCCGCTGTACCTTGCCGTGCGGAAAGGGCGC
ACGGAAACGGTCCGGGTGCTTCTGCGCGGGCAAGCGGACCCGCTGCTGGA
GTTCACTAATCAGGAATCGGGAGAGACCTACGTCCCGCTGGACACCGCTG
CGATATACGGGCACTCCGAAGTGGTGCAGGAGCTACTTCAGCGGGTTGGG
ATCGGCGGTTGTGGCGGTGCGTCCGATGGCTTAAATGCCTTCCGCATTGC
GTCGATGCATCAACGCTTGGAGATGATGGCCATGCTGGCGGACGCTGGAG
TAGTTGATACGGGTGAAGCTCTGCTCGACGCTGCCGAGCACGGCCACGAA
GCAGCGGCAAGGTACCTCGTGAAGCGGTTCGGGCGGGTGGCCACTTACGT
AGACGCGCGCGACGCGAAGGACCGAACGCCTTTGATGTTGAGCATCGTGG
GGTGCGCACCAAGCTCTCCCAGGATCGTGCGA
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