mRNA_L-elsbetiae_contig1977.5902.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1977.5902.1
Unique NamemRNA_L-elsbetiae_contig1977.5902.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1977.5902.1 vs. uniprot
Match: D8LRU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU9_ECTSI)

HSP 1 Score: 588 bits (1515), Expect = 2.920e-207
Identity = 293/342 (85.67%), Postives = 313/342 (91.52%), Query Frame = 1 
Query:  118 MLGSDHRQTIAAVSRLAAYMGRTGKGINHIFKDLDSSGDGKLSHHELEQALVELDINISTVQAHALVNFMDNDGDGEIDVKELDGTIRLYKRRKRAGQLGTWHGNLSAQQDPVFPNWLIGRDDFQQVFTRQEPQEGSFSAEAGACGVPEVEAALQKQPEDRLHRDVQVITNWLGQQDSLRSLGAKRLIEVTNVVECKELKPDEQLFAEGDESEAFYLILSGDVVVLVKMCPVAVLGPGETFGELGLQNLEKRTATVKANQSGAVLVTMRTSDYRHILSKFLMDKMQLKINLLQGTFALAKNWSHSKIRAFAYCMAHHNHSKGEYIYRQGESAHNLYIVFRGK 1143
            MLGSDHRQTIAAVS+LAAYM RTGKGINHIFKDLDSSGDGKLSH ELE+ALVELDINI+TVQAHALV FMDNDGDGEIDVKELD TIRLYKRRKRAG+L TW GNL AQQDPVFPNWLIGRDDFQQVF+R       FS E GA GVPE++ ALQKQPE+RLHRDVQ IT WLGQQDSLRSLGAKRL+EVTNVVEC+EL+P E+LF+EGDESEAFY+IL G VVVLVK CPVAVLGPGETFGELGLQNLEKRTATVKA+ SGA+LVTMRTSDYRHILSK+LMDKMQ+KINLLQ TF LAKNWSHSKIRAFAYCMAHH+H+KGEYIYRQGE AHNLYIVF GK
Sbjct:    1 MLGSDHRQTIAAVSQLAAYMSRTGKGINHIFKDLDSSGDGKLSHQELERALVELDINITTVQAHALVTFMDNDGDGEIDVKELDSTIRLYKRRKRAGELSTWRGNLDAQQDPVFPNWLIGRDDFQQVFSR-------FSEEDGAYGVPEIKKALQKQPEERLHRDVQAITGWLGQQDSLRSLGAKRLMEVTNVVECQELRPGEKLFSEGDESEAFYMILDGHVVVLVKQCPVAVLGPGETFGELGLQNLEKRTATVKADPSGALLVTMRTSDYRHILSKYLMDKMQMKINLLQDTFELAKNWSHSKIRAFAYCMAHHSHAKGEYIYRQGEPAHNLYIVFSGK 335
[Close]
BLAST of mRNA_L-elsbetiae_contig1977.5902.1 vs. uniprot
Match: A0A6H5L5V3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5V3_9PHAE)

HSP 1 Score: 545 bits (1405), Expect = 7.080e-189
Identity = 294/443 (66.37%), Postives = 317/443 (71.56%), Query Frame = 1 
Query:  118 MLGSDHRQTIAAVSRLAAYMGRTGKGINHIFK--------DLDSSGDGKLSHHELEQALVELDINISTVQAHALVNFM------------------------------------------------------------DNDGDGEIDVKELDGTIRLYKRRKRAGQLGTWHGNLSAQQDPVFPNWLIGRDDFQQVFTRQEPQEGS--------------------------------FSAEAGACGVPEVEAALQKQPEDRLHRDVQVITNWLGQQDSLRSLGAKRLIEVTNVVECKELKPDEQLFAEGDESEAFYLILSGDVVVLVKMCPVAVLGPGETFGELGLQNLEKRTATVKANQSGAVLVTMRTSDYRHILSKFLMDKMQLKINLLQGTFALAKNWSHSKIRAFAYCMAHHNHSKGEYIYRQGESAHNLYIVFRGKV 1146
            MLGSDHRQTIAAVSRLAAYMGRTGKGINHIFK        +LDSSGDG+LSH ELE+ALVELDINI+TVQAHALV FM                                                            DNDGDGEIDVKELD TIRLYKRRKRAG+L TW GNL AQQDPVFPNWLIGRDDFQQVF+RQ     S                                FS E GA GVPE++ ALQKQPE+RLHRDVQ IT WLGQQDSLRSLGAKRL+EVTNVVEC+EL+P+E+LF+EGDESEAFY+IL G VVVLVK CPVAVLGPGETFGELGLQNLEKRTATVKA+ SGA+LV MRTSDYRHILSK+LMDKMQ+KINLLQ TF LAKNWSHSKIRAFAYCMAHH+H+KGEYIYRQG+ AHNLYIVF GKV
Sbjct:    1 MLGSDHRQTIAAVSRLAAYMGRTGKGINHIFKGAASSELQNLDSSGDGRLSHQELERALVELDINITTVQAHALVTFMGENNDGGAGREAGQEAGSHIIRGIPRSTLLYLHLVTWHVKNTALHSGIYVKLSSPLRVSPDNDGDGEIDVKELDSTIRLYKRRKRAGELSTWRGNLDAQQDPVFPNWLIGRDDFQQVFSRQAKNNESTRGDRSNEHTTWGAVESSFAFSRGPWRPINIEFSEEDGAYGVPEIKKALQKQPEERLHRDVQAITGWLGQQDSLRSLGAKRLMEVTNVVECQELRPEEKLFSEGDESEAFYMILDGHVVVLVKQCPVAVLGPGETFGELGLQNLEKRTATVKADPSGALLVRMRTSDYRHILSKYLMDKMQMKINLLQDTFELAKNWSHSKIRAFAYCMAHHSHAKGEYIYRQGDPAHNLYIVFSGKV 443
[Close]
BLAST of mRNA_L-elsbetiae_contig1977.5902.1 vs. uniprot
Match: A0A836C935_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C935_9STRA)

HSP 1 Score: 283 bits (723), Expect = 3.380e-86
Identity = 159/403 (39.45%), Postives = 239/403 (59.31%), Query Frame = 1 
Query:  127 SDHRQTIAAVSRLAAYMGRTGKGINHIFKDLDSSGDGKLSHHELEQALVELDINISTVQAHALVNFMDNDGDGEIDVKELDGTIRLYKRRKRAGQLGTWHGNLSAQQDPVFPNWLIGRDDFQQVFTRQEPQEGSFSAEAGACGVPEVEAALQKQPEDRLHRDVQVITNWLGQQDSLRSLGAKRLIEVTNVVECKELKPDEQLFAEGDESEAFYLILSGDVVVLVKMCPVAVLGPGETFGELGLQNLEKRTATVKANQSGAV--LVTMRTSDYRHILSKFLMDKMQLKINLLQGTFALAKNWSHSKIRAFAYCMAHHNHSKGEYIYRQGESAHNLYIVFRGKVLAQRVLRYRFVNRWPVSHKKTHQRNSMKQARRVTINLKTLSVGDVTGEDCVLGFEARQYQV 1329
            SD   T+ A+++L ++M +  K +  + +  +S G GK+ H +L  A+  L + +++ Q  AL+NF D++G G I +K     +++ ++R + G +G  H  L   +D VFPNWLI R DFQ VF+R       F    G       E +L+K P +R+H D+Q I NWL Q  +L++LGA+R +E  +VV  ++  P   +FA+G  S+AFY++ SG V V +    VA L  G TFGE+GL +   R AT++A+Q+ AV  +V +R +DY+HI+SK    +M  KI+LL        +WS SKIRAF+YCMA+  H  G+ +Y   E AH  YIV  G  + QR L YR  NRWP   ++  +  +++Q   +T+NL+ +  GD  GED VLGF+ RQYQV
Sbjct:    9 SDPVDTVIAINKLTSFMEQRRKRLVQLLRGFESGGRGKVLHRDLYLAISNLPVQLTSQQFLALLNFADSEGTGRISIKNFCSMVQVLQQRLKEGFMG--HDALELPKDTVFPNWLISRADFQLVFSR-------FLTAGGRDLQSATENSLRKNPFERVHEDLQYIANWLSQSPALQALGAQRCLEFASVVRMEDHAPGHVVFAQGSISDAFYVVHSGSVDVEIDGVWVANLAAGATFGEMGLDSNAARIATIRASQAFAVTSVVNIRLTDYKHIMSKVNAARMARKIDLLSRHCRFGADWSCSKIRAFSYCMAYQRHPLGKVVYDTSEVAHTFYIVASGTAVLQRKLVYRLSNRWPGQSREGGEMRAVQQV--ITVNLRDVKQGDTFGEDAVLGFDKRQYQV 400
[Close]
BLAST of mRNA_L-elsbetiae_contig1977.5902.1 vs. uniprot
Match: A0A067BW33_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BW33_SAPPC)

HSP 1 Score: 107 bits (268), Expect = 2.670e-21
Identity = 84/325 (25.85%), Postives = 149/325 (45.85%), Query Frame = 1 
Query:  391 RRKRAGQLGTWHGNLSAQQDPVFPNWLIGRDDFQQVFTRQEPQEGSFSAEAGACGVPEVEAALQKQPEDRLHRDVQVITNWLGQQDSLRSLGAKRLIEVTNVVECKELKPDEQLFAEGDESEAFYLILSGDVVVLVKMCPVAVLGPGETFGELGLQNLE-KRTATVKANQSGAVLVTMRTSDYRHILSKFLMDKMQLKINLLQGTFALAKNWSHSKIRAFAYCMAHHNHSKGEYIYRQGESAHNLYIVFRGKVLAQRVLRYRFVNRWPVSHKKTHQRNSMKQARRVTINLKTLSVGDVTGEDCVLGFEARQYQVVALTQDVQVCV 1362
            RR  A   G        +   +FP WL+ R DFQ  F R       FS +       ++  A QK P+ R   D+Q+++ WL    +L+SL   +  E+   +    + P E +F +GD  +A Y++++G+V V+V    V  L  G +FGE+ L+  + +RTA ++A++ GA L+ +R  DY+  + ++   + +     L+   A+ +++S +K+R F           G  +Y +GE    LY V  G +  ++ + +   +R PV+    H          V +   T+      G +  +   AR +  V LT    V +
Sbjct:   23 RRLEAPASGACKDPAGPESADIFPRWLVERKDFQTFFPR-------FSNKV-ILEDDKLRHAAQKDPDARNGIDIQLLSKWLVNVPALKSLNVPQAGELAKRMRWASVDPLEFVFHKGDIGDACYILVTGEVYVVVNNERVGTLKKGMSFGEVALELEDARRTADIQASERGAELLVIRGEDYQKNVFRYQAKRRKKLTRWLRNDIAIFRDFSDNKLRYFESVSVDLFLHAGNCVYMEGEDVGALYFVKSGSISLEKNVLFETKHRRPVT---VHSWVVQSHKTSVQVPCFTVEATGSFGMEFFVQLPARSHTAVVLTDTHLVAI 336
[Close]
BLAST of mRNA_L-elsbetiae_contig1977.5902.1 vs. uniprot
Match: A0A662Y2B2_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y2B2_9STRA)

HSP 1 Score: 107 bits (267), Expect = 5.490e-21
Identity = 102/384 (26.56%), Postives = 170/384 (44.27%), Query Frame = 1 
Query:  364 LDGTIRLYKRRKRAGQLGTWHGNLSAQQD-PVFPNWLIGRDDFQQVFTRQEPQEGSFSAEAGACGVPEVEAALQKQPEDRLHRDVQVITNWLGQQDSLRS-LGAKRLIEVTNVVECKELKPDEQLFAEGDESEAFYLILSGDVVVLVKMCPVAVLGPGETFGELGLQ--------------NLEKRTAT-------VKANQSGAVLVTMRTSDYRHILSKFLMDKMQLKINLLQGTFALAKNWSHSKIRAFAYCMAHHNHSKGEYIYRQGESAHNLYIVFRGKVLAQRVLRYRFVNRWPVS-HKKTHQRNSMKQARRVTINLKTLSVGDVTGEDCVLGFEARQYQVVALTQDVQVCVVSRNNAF---LYLTSGELDQLHSQTQQ 1434
            +DG     + R+R   +        A  D  VFP W+  R DFQ  F R   +  +   E    GVP       K+P DR   ++Q +  W+ +  S+ + L   +  E+  +   +  +P E +F +GD+ +A YLILSG+V +L+    VA +     FG++ LQ              N+   TA        + A   G  ++ +   DY   L++    + +  IN L     L ++   SK+  +          KGE +Y QGES    Y+V  G+V  +  ++Y   +RWP   HK   Q ++++   RV  + +  S G    E  + G +AR Y VVA T  V++  ++R + F      T   LD++H + ++
Sbjct:  109 VDGNQSNQEARRRPSTVAGSTAIAPATGDRDVFPAWIRERKDFQVFFPRFSDRVVT-DEEILLQGVP-------KEPSDRNIVELQCLARWIMKIPSMTTFLDLSQATEIAKLTRYRVFRPHEYVFRKGDKGDACYLILSGEVHILIDGEKVASVTKNSAFGDIALQLENATRGADVQASFNVANATAASAGGLNAINAPPIGCEVLMIMAEDYHRTLARCQTRRRKHLINWLHTEVTLFRDCVESKLHFYELVSIDVPLKKGEVLYSQGESVGAFYVVRSGRVRLEVDIQYERRHRWPCGKHKWKQQVHAVRS--RVAFHTEE-SAGFFGFEMFIEGQQARAYTVVADTPTVELVALNRVDCFSPYFSFTPRALDRIHDKNEK 481
[Close]
BLAST of mRNA_L-elsbetiae_contig1977.5902.1 vs. uniprot
Match: A0A6G0XCW6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCW6_9STRA)

HSP 1 Score: 106 bits (265), Expect = 5.940e-21
Identity = 80/263 (30.42%), Postives = 133/263 (50.57%), Query Frame = 1 
Query:  451 PVFPNWLIGRDDFQQVFTRQEPQEGSFSAEAGACGVPEVEAALQKQPEDRLHRDVQVITNWLGQQDSLRSLGAKRLIEVTNVVECKELKPDEQLFAEGDESEAFYLILSGDVVVLVKMCPVAVLGPGETFGELGLQNLE-KRTATVKANQS-GAVLVTMRTSDYRHILSKFLMDKMQLKINLLQGTFALAKNWSHSKIRAFAYCMAHHNHSKGEYIYRQGESAHNLYIVFRGKV-LAQRVL------RYRFVNRWPVSHKKTH 1212
            P+FP WL  R DFQ  F R       FS  A +    +V  A  K+PE R   D+Q+++ WL    SL++L A +  E+   +      P++ +F +GD  +A Y+I++G+V ++V    V  L  G +FGE+ L++ + KRTA ++  ++  A L+ +R  DY+  + ++   + +     L+   ++ +++S +K+R F           G  +Y +GE    LYIV  G + L + VL      R   VN W V   KTH
Sbjct:   27 PIFPQWLTERKDFQSFFPR-------FSNRAWSED-EKVRLAALKEPEKRNGIDIQLLSKWLVFVPSLKALNAVQAGEIAKRMRWASYSPNQIIFQKGDVGDACYIIVNGEVDIIVNNEKVGTLKKGMSFGEVALEHEDAKRTADIQVTETCPADLLVIRGEDYQKNVYRYQAKRRKKLTKWLRTDVSIFRDFSDNKLRYFESVSVDLFLHAGNCVYMEGEEVGALYIVKSGTISLEKNVLFETKHRRPTSVNSWAVQSHKTH 281
[Close]
BLAST of mRNA_L-elsbetiae_contig1977.5902.1 vs. uniprot
Match: W4GSM6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GSM6_9STRA)

HSP 1 Score: 103 bits (257), Expect = 7.130e-20
Identity = 74/264 (28.03%), Postives = 130/264 (49.24%), Query Frame = 1 
Query:  448 DPVFPNWLIGRDDFQQVFTRQEPQEGSFSAEAGACGVPEVEAALQKQPEDRLHRDVQVITNWLGQQDSLRSLGAKRLIEVTNVVECKELKPDEQLFAEGDESEAFYLILSGDVVVLVKMCPVAVLGPGETFGELGLQNLEK-RTATVKANQSG-AVLVTMRTSDYRHILSKFLMDKMQLKINLLQGTFALAKNWSHSKIRAFAYCMAHHNHSKGEYIYRQGESAHNLYIVFRGKVLAQRVLRYRFVNR-------WPVSHKKTH 1212
            +P+FP WL+ R DFQ  F R       F   A      ++  A QK+PE R   D+Q+++ WL    SL++L   +  E+   +      P++ +F +GD  +A Y+I++G V ++V    V  L  G  FGE+ L+  +  RTA ++  +SG A L+ +R  DY+  + ++   + +     L+   ++ +++S +K+R F           G  +Y +GE+   LYIV  G +  ++ + +   +R       W V   KTH
Sbjct:   37 NPIFPQWLVERKDFQTFFPR-------FGTRA-LSEDEKLRMAAQKEPEKRNGIDIQLLSKWLLNVPSLKALNVMQAGEIAKRMRWASFAPNQLVFKKGDIGDACYIIVNGQVDIVVNGEKVGRLVKGMNFGEVALEQEDALRTADIQVTESGPADLLLIRAEDYQKNVYRYQSKRRKKLTKWLRTEVSIFRDFSDNKLRYFESVSIDLFLHPGNCVYMEGEAVGALYIVKSGTISLEKNVLFETKHRRPTGIKAWSVQSHKTH 292
[Close]
BLAST of mRNA_L-elsbetiae_contig1977.5902.1 vs. uniprot
Match: A0A1V9ZVX1_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVX1_9STRA)

HSP 1 Score: 103 bits (256), Expect = 8.320e-20
Identity = 73/262 (27.86%), Postives = 133/262 (50.76%), Query Frame = 1 
Query:  430 NLSAQQDP--VFPNWLIGRDDFQQVFTRQEPQEGSFSAEAGACGVPEVE---AALQKQPEDRLHRDVQVITNWLGQQDSLRSLGAKRLIEVTNVVECKELKPDEQLFAEGDESEAFYLILSGDVVVLVKMCPVAVLGPGETFGELGLQ-NLEKRTATVKANQSGAVLVTMRTSDYRHILSKFLMDKMQLKINLLQGTFALAKNWSHSKIRAFAYCMAHHNHSKGEYIYRQGESAHNLYIVFRGKVLAQRVLRYRFVNRWPVS 1197
            N S   +P  VFP WL+ R DFQ  F R       FS +     +PE E    A QK+PE R   D+Q+++ WL    +L+SL   +  E+   +     +P + +F +GD  +A Y++++G+V V++    V  L  G +FGE+ L+ +  +RTA ++A  +GA  + +R  DY++ + ++   + +     L+   ++ +++S +K+R F           G  +Y +GE    LY +  G +  ++ + +   +R P S
Sbjct:   26 NTSVHHEPTGVFPMWLVERKDFQTFFPR-------FSNKL----IPEDEKLRVAAQKEPEARNGIDIQLLSKWLVNVPALKSLNVLQAGELAKRMRWASTEPLDYVFRKGDIGDACYILVNGEVNVILNHERVGTLTKGMSFGEVALELDDARRTADIQAGDNGADFLVIRGEDYQNNVFRYQAKRRKKITKWLRTEISVFRDFSDNKLRYFESVSIDLFLHPGNCVYMEGEEVGALYFIKTGSISLEKNVMFETRHRRPAS 276
[Close]
BLAST of mRNA_L-elsbetiae_contig1977.5902.1 vs. uniprot
Match: A0A1V9Z9N3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9N3_9STRA)

HSP 1 Score: 102 bits (255), Expect = 9.460e-20
Identity = 70/261 (26.82%), Postives = 131/261 (50.19%), Query Frame = 1 
Query:  454 VFPNWLIGRDDFQQVFTRQEPQEGSFSAEAGACGVPEVEAALQKQPEDRLHRDVQVITNWLGQQDSLRSLGAKRLIEVTNVVECKELKPDEQLFAEGDESEAFYLILSGDVVVLVKMCPVAVLGPGETFGELGLQNLE-KRTATVKANQSGAVLVTMRTSDYRHILSKFLMDKMQLKINLLQGTFALAKNWSHSKIRAFAYCMAHHNHSKGEYIYRQGESAHNLYIVFRGKVLAQRVLRYRF-------VNRWPVSHKKTH 1212
            +FP WL+ R DFQ  F R       FS +       ++  A QK P+ R   DVQ+++ WL    +L+SL   +  E+   +    + P++ +F +GD  +A Y++++G+V V++    V  L  G +FGE+ L+  + +RTA ++A++ GA L+ +R  DY+  + ++   + +     L+   ++ +++S +K+R F           G  +Y +GE    LY +  G +  ++ + +         VN W V   KT+
Sbjct:   36 IFPRWLVERKDFQTFFPR-------FSNKV-VLEDDKLRMAAQKDPDARNGIDVQLLSKWLVNVPALKSLNVLQAGELAKRMRWASIPPNDFVFHKGDIGDACYILVTGEVYVMLNNERVGTLKKGMSFGEVALELEDARRTADIQASEKGAELLVIRGEDYQKNVFRYQARRRKKLTKWLRNEISVFRDFSDNKLRYFESVSIDLFLHPGNRVYMEGEEVGALYFIKSGSISLEKNVMFETKHRRPATVNSWVVQSHKTN 288
[Close]
BLAST of mRNA_L-elsbetiae_contig1977.5902.1 vs. uniprot
Match: A0A067C7J5_SAPPC (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C7J5_SAPPC)

HSP 1 Score: 100 bits (250), Expect = 2.180e-19
Identity = 70/242 (28.93%), Postives = 123/242 (50.83%), Query Frame = 1 
Query:  439 AQQDP-------VFPNWLIGRDDFQQVFTRQEPQEGSFSAEAGACGVPEVEAALQKQPEDRLHRDVQVITNWLGQQDSLRSLGAKRLIEVTNVVECKELKPDEQLFAEGDESEAFYLILSGDVVVLVKMCPVAVLGPGETFGELGLQNLE-KRTATVKANQSGAVLVTMRTSDYRHILSKFLMDKMQLKINLLQGTFALAKNWSHSKIRAFAYCMAHHNHSKGEYIYRQGESAHNLYIVFRG 1140
            A++DP       +FP WL+ R DFQ  F R       FS +       ++  A QK P+ R   D+Q+++ WL    +L+SL   +  E+   +    + P E +F +GD  +A Y++++G+V V+V    V  L  G +FGE+ L+  + +RTA ++A++ GA L+ +R  DY+  + ++   + +     L+   A+ +++S +K+R F           G  +Y +GE    LY V  G
Sbjct:   32 ARKDPAGPESADIFPRWLVERKDFQTFFPR-------FSNKV-ILEDDKLRLAAQKDPDARNGIDIQLLSKWLVNVPALKSLNVVQAGELAKRMRWASVDPLEFVFHKGDIGDACYILVTGEVYVVVNNERVGTLKKGMSFGEVALELEDARRTADIQASERGAELLVIRGEDYQKNVFRYQAKRRKKLTRWLRNDIAIFRDFSDNKLRYFESVSVDLFLHAGNCVYMEGEDVGALYFVKSG 265
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1977.5902.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRU9_ECTSI2.920e-20785.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5V3_9PHAE7.080e-18966.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C935_9STRA3.380e-8639.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A067BW33_SAPPC2.670e-2125.85Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A662Y2B2_9STRA5.490e-2126.56Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A6G0XCW6_9STRA5.940e-2130.42Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W4GSM6_9STRA7.130e-2028.03Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A1V9ZVX1_9STRA8.320e-2027.86Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A1V9Z9N3_9STRA9.460e-2026.82Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A067C7J5_SAPPC2.180e-1928.93Cyclic nucleotide-binding domain-containing protei... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1977contigL-elsbetiae_contig1977:13460..21984 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score589.0
Seed ortholog evalue2.3e-165
Seed eggNOG ortholog2880.D8LRU9
KEGG koko:K04345,ko:K10273
KEGG Pathwayko01522,ko04010,ko04014,ko04020,ko04024,ko04062,ko04113,ko04114,ko04138,ko04140,ko04211,ko04213,ko04261,ko04270,ko04310,ko04340,ko04341,ko04371,ko04530,ko04540,ko04611,ko04713,ko04714,ko04720,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04740,ko04742,ko04750,ko04910,ko04911,ko04912,ko04913,ko04914,ko04915,ko04916,ko04918,ko04919,ko04921,ko04922,ko04923,ko04924,ko04925,ko04926,ko04927,ko04934,ko04961,ko04962,ko04970,ko04971,ko04976,ko05012,ko05020,ko05030,ko05031,ko05032,ko05110,ko05146,ko05165,ko05166,ko05169,ko05200,ko05203,ko05205,ko05414,map01522,map04010,map04014,map04020,map04024,map04062,map04113,map04114,map04138,map04140,map04211,map04213,map04261,map04270,map04310,map04340,map04341,map04371,map04530,map04540,map04611,map04713,map04714,map04720,map04723,map04724,map04725,map04726,map04727,map04728,map04740,map04742,map04750,map04910,map04911,map04912,map04913,map04914,map04915,map04916,map04918,map04919,map04921,map04922,map04923,map04924,map04925,map04926,map04927,map04934,map04961,map04962,map04970,map04971,map04976,map05012,map05020,map05030,map05031,map05032,map05110,map05146,map05165,map05166,map05169,map05200,map05203,map05205,map05414
KEGG ModuleM00695
Hectar predicted targeting categoryother localisation
EggNOG free text desc.cAMP-dependent protein kinase regulator activity
EggNOG OGsCOG0664@1,KOG1113@2759
EC2.7.11.11
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03019,ko03036,ko04121
Exons14
Model size1635
Cds size1635
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1977.5902.1prot_L-elsbetiae_contig1977.5902.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1977 13460..21984 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815818.6496215-CDS-L-elsbetiae_contig1977:13459..135731622815818.6496215-CDS-L-elsbetiae_contig1977:13459..13573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 13460..13573 -
1691683123.0218837-CDS-L-elsbetiae_contig1977:13459..135731691683123.0218837-CDS-L-elsbetiae_contig1977:13459..13573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 13460..13573 -
1622815818.6638553-CDS-L-elsbetiae_contig1977:14516..146061622815818.6638553-CDS-L-elsbetiae_contig1977:14516..14606Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 14517..14606 -
1691683123.0386124-CDS-L-elsbetiae_contig1977:14516..146061691683123.0386124-CDS-L-elsbetiae_contig1977:14516..14606Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 14517..14606 -
1622815818.676743-CDS-L-elsbetiae_contig1977:15352..154571622815818.676743-CDS-L-elsbetiae_contig1977:15352..15457Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 15353..15457 -
1691683123.0483048-CDS-L-elsbetiae_contig1977:15352..154571691683123.0483048-CDS-L-elsbetiae_contig1977:15352..15457Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 15353..15457 -
1622815818.6889627-CDS-L-elsbetiae_contig1977:15877..159611622815818.6889627-CDS-L-elsbetiae_contig1977:15877..15961Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 15878..15961 -
1691683123.0601716-CDS-L-elsbetiae_contig1977:15877..159611691683123.0601716-CDS-L-elsbetiae_contig1977:15877..15961Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 15878..15961 -
1622815818.699359-CDS-L-elsbetiae_contig1977:16694..167931622815818.699359-CDS-L-elsbetiae_contig1977:16694..16793Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 16695..16793 -
1691683123.0701246-CDS-L-elsbetiae_contig1977:16694..167931691683123.0701246-CDS-L-elsbetiae_contig1977:16694..16793Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 16695..16793 -
1622815818.7123625-CDS-L-elsbetiae_contig1977:16963..171251622815818.7123625-CDS-L-elsbetiae_contig1977:16963..17125Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 16964..17125 -
1691683123.0837908-CDS-L-elsbetiae_contig1977:16963..171251691683123.0837908-CDS-L-elsbetiae_contig1977:16963..17125Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 16964..17125 -
1622815818.7242992-CDS-L-elsbetiae_contig1977:17731..178241622815818.7242992-CDS-L-elsbetiae_contig1977:17731..17824Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 17732..17824 -
1691683123.093949-CDS-L-elsbetiae_contig1977:17731..178241691683123.093949-CDS-L-elsbetiae_contig1977:17731..17824Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 17732..17824 -
1622815818.7346878-CDS-L-elsbetiae_contig1977:18264..183961622815818.7346878-CDS-L-elsbetiae_contig1977:18264..18396Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 18265..18396 -
1691683123.104686-CDS-L-elsbetiae_contig1977:18264..183961691683123.104686-CDS-L-elsbetiae_contig1977:18264..18396Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 18265..18396 -
1622815818.744828-CDS-L-elsbetiae_contig1977:19157..192681622815818.744828-CDS-L-elsbetiae_contig1977:19157..19268Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 19158..19268 -
1691683123.1174362-CDS-L-elsbetiae_contig1977:19157..192681691683123.1174362-CDS-L-elsbetiae_contig1977:19157..19268Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 19158..19268 -
1622815818.755415-CDS-L-elsbetiae_contig1977:19505..196231622815818.755415-CDS-L-elsbetiae_contig1977:19505..19623Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 19506..19623 -
1691683123.1306062-CDS-L-elsbetiae_contig1977:19505..196231691683123.1306062-CDS-L-elsbetiae_contig1977:19505..19623Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 19506..19623 -
1622815818.7688293-CDS-L-elsbetiae_contig1977:20219..204181622815818.7688293-CDS-L-elsbetiae_contig1977:20219..20418Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 20220..20418 -
1691683123.1403203-CDS-L-elsbetiae_contig1977:20219..204181691683123.1403203-CDS-L-elsbetiae_contig1977:20219..20418Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 20220..20418 -
1622815818.778364-CDS-L-elsbetiae_contig1977:20839..209531622815818.778364-CDS-L-elsbetiae_contig1977:20839..20953Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 20840..20953 -
1691683123.149316-CDS-L-elsbetiae_contig1977:20839..209531691683123.149316-CDS-L-elsbetiae_contig1977:20839..20953Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 20840..20953 -
1622815818.790926-CDS-L-elsbetiae_contig1977:21524..216371622815818.790926-CDS-L-elsbetiae_contig1977:21524..21637Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 21525..21637 -
1691683123.1592538-CDS-L-elsbetiae_contig1977:21524..216371691683123.1592538-CDS-L-elsbetiae_contig1977:21524..21637Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 21525..21637 -
1622815818.8027487-CDS-L-elsbetiae_contig1977:21883..219841622815818.8027487-CDS-L-elsbetiae_contig1977:21883..21984Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 21884..21984 -
1691683123.1699746-CDS-L-elsbetiae_contig1977:21883..219841691683123.1699746-CDS-L-elsbetiae_contig1977:21883..21984Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1977 21884..21984 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1977.5902.1

>prot_L-elsbetiae_contig1977.5902.1 ID=prot_L-elsbetiae_contig1977.5902.1|Name=mRNA_L-elsbetiae_contig1977.5902.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=545bp
MDDGSSRSSVSLSSKYTRGSLSQAANQSKEDSAGQHFDEMLGSDHRQTIA
AVSRLAAYMGRTGKGINHIFKDLDSSGDGKLSHHELEQALVELDINISTV
QAHALVNFMDNDGDGEIDVKELDGTIRLYKRRKRAGQLGTWHGNLSAQQD
PVFPNWLIGRDDFQQVFTRQEPQEGSFSAEAGACGVPEVEAALQKQPEDR
LHRDVQVITNWLGQQDSLRSLGAKRLIEVTNVVECKELKPDEQLFAEGDE
SEAFYLILSGDVVVLVKMCPVAVLGPGETFGELGLQNLEKRTATVKANQS
GAVLVTMRTSDYRHILSKFLMDKMQLKINLLQGTFALAKNWSHSKIRAFA
YCMAHHNHSKGEYIYRQGESAHNLYIVFRGKVLAQRVLRYRFVNRWPVSH
KKTHQRNSMKQARRVTINLKTLSVGDVTGEDCVLGFEARQYQVVALTQDV
QVCVVSRNNAFLYLTSGELDQLHSQTQQELYRYAGDTGTSYYKAVKGWQD
ASRMKNKVIGPSYRNRLEVNERQMRVRKANGNTEAPRRHQHCQRE
back to top

mRNA from alignment at L-elsbetiae_contig1977:13460..21984-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1977.5902.1 ID=mRNA_L-elsbetiae_contig1977.5902.1|Name=mRNA_L-elsbetiae_contig1977.5902.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8525bp|location=Sequence derived from alignment at L-elsbetiae_contig1977:13460..21984- (Laminarionema elsbetiae ELsaHSoW15)
ATGGACGATGGAAGCTCTCGCAGCTCGGTCTCGCTGTCTTCGAAATATAC
TCGGGGCTCGCTCTCGCAGGCTGCAAACCAATCGAAGGAAGACTCAGCAG
GGTAAGCGTTGAGATTCCTCTCCCGTTCTTGTTGGTGAGGGTATCCAAGC
ATGATGTGCAACGGTAACGGTATGAATGCCAAATGCTGCCACCCTCTGCC
AGCTGGTAGATACTGTTTAGAGTTTGGTTGCAAACCTCGCATCTGTACTA
CAGCACTAAGGAAGGTATCCTCCTATCCCTACACACCACGAATGATACGC
CGCTCGCCGTCATCCTGTATTGATAATGTACGTACGTGGAAGTGCAGGCA
GCACTTTGATGAAATGCTGGGCAGCGACCACAGGCAAACTATTGCGGCGG
TATCACGGCTCGCTGCGTACATGGGGCGCACAGGCAAAGGCATCAACCAC
ATTTTCAAAGGTGCACGCACAACTGTATTTGTAGCATGTACATACATAGC
TACTGCTGAAACTGGTGTGTAGACTACTGTATGTAGATGACGAACCGTTG
AAATGAAAGCAGTATCTGTCTCCTCTTATAGATTCAATGACGCAAGAAAA
GTCAGACTAACAGCATCGTGAAGATGACGTACAGAGCGACCGTGCAGCCG
TATATTTAGAGGTGGCATATACATAGAAGATATGCGACCCTCACCGGGAC
CGGAAGATGCGGTTGTTGCACACACATACAAGTATTATCTAGATATCCCT
ATTATGCTTGCTCCGAAGGAGCCATGTAATATCACGAAGCTATCCAGTAT
CATCCATACTATCTCCCTCCGCATATGCCTGCCCATGATGCAGCCGTAGC
GCGCCCCTTTCGGAAGCAATTCTTTCTGCGAAGCATGAGTCCAATCCTGG
GCCGTGTTACTGGAGAAAAGGAATTACATAGTTTGAAGCTGTTACCCCGA
GAACTGTCAAAATTCGACACCTCGAATGGACAACGCTGCGGATTTTGCCC
TTCCCGCACGTGATATGGTATAATTGTGTAGATCTTGACTCCAGCGGCGA
CGGAAAGCTTTCCCATCACGAGTTGGAACAGGCACTTGTTGAGCTGGACA
TCAACATTTCTACGGTCCAGGCTCATGCTCTCGTGAATTTTATGGGTGAG
AGGCCGTGTAGGGCTTGGACTTTGCTGAGATGCTTGAACGCAAAAAAGGG
TGGTACAGCATGTGCACTGTTCGGGCACCATCCTTCATTAGCATGGTCTC
AACCCGATCATTCAAAGCTGCAAACCGTTGGAGCTACAAATCCCTGTTCA
ACTTTTTCAACGTATTCACTGTCACCCACCAGTATTTACCACCCTTCCGC
AAGATCGCTGTTTTTAGAGCCGTACGATTCAGGCCACTCCTCGATGAACA
ATTGTTTGGATTTGTTTGGAACTTCGAGCATTGTAGGCTTCGAAATCAGT
TTTTACGCGAGCGAGTTGTTGTGCTACATATCACACACCACTCGGCGGAT
CGACAAGAAACACGAGCGCCAAGAGCATGCTAAGTTTTTATTCTTGGTAT
ACATGTGCGTCCCCAGACAACGATGGCGATGGCGAAATCGACGTCAAGGA
GTTGGATGGCACGATCCGCTTGTACAAGCGGCGGAAGCGAGCAGGGCAGC
TAGGCACGTGGCACGGCAACCTATCCGCCCAGCAAGACCCCGTATTTCCC
AACTGGCTCATCGGCAGGGACGACTTTCAGCAAGTGTTTACGAGGCAAGA
ACCACAGGAGGGCTCGTAGGCTGATTCCCTCTGGCTGCGTGACGAATTTA
TGGGCAAAATCCCATCCATGCACAATAGCGCCGCCCCCTTTCTTGCTTTT
TCGCGTACACCTATCGTGGATCGATAGGCGTACATTGTGGTAGATGGTCT
ACGCCGCCTGGAGGGGCGCACACGTGGTCGTTGAGTCCAACAAGGGAGTC
AAGTTAGCTCCATGTGTTGGACTGTCTTGTGACGAGGGTTCGGACCTGGC
ACGCAATGCACGGAAGGAAACTATACGCGATGCCGTTTGGAATCAAGCAC
TTGCTGAAATCACAGAAGAAGAATTTACAAGGTGATGAAACAACAACGGG
GTTGCCGAAACCACGAGCACACACCCAGACATTCAGAGAGTAGGGATCTT
GAGCGGGCGGATGTTTTCCGCTCGAACACTCCTGTCAAAGCAGCAAGACT
AACTCAACATCGAATGCAGCCGCACATGGGACCGACTGCATCATGGAATA
GGCTGGCAACATCTAGCGGCATCCCCAAAGCCCCTTGATGGTAGTTATAA
CTGTTCCGTCAGCTCACTCACGAAACGGCGCTGATAGCTGCATGGTTGCT
CGCTCTCTTAGGTTTTCCGCCGAAGCTGGGGCCTGCGGGGTTCCAGAGGT
AGAAGCTGCTCTCCAAAAACAACCCGAAGACCGACTCCACCGAGACGTGC
AAGTAATCACCAACTGGTTAGGCCAGCAGGTATAAGTGATTCATCATACG
CAAACATCAGAGGTGTGGCAGAAAGCACTATGACATGGTTGCTCGCGCTC
TTCGCTTGTCTGTACGGTCACCACCGCCGTAAACGCAAAGGGCGGCTATT
TTTGTGTGCACAATAATATGCAGCACGGTACGTGCAACAGAAGTGACGGC
AACTACGGCTGGCGAAATACTAATTATGGTTTATCGGAAATACTACTTTT
GGTGAAACAAATGCAGGATTCCCTGCGATCTTTGGGGGCGAAACGGCTCA
TTGAGGTGACCAATGTGGTCGAGTGTAAGGAGCTCAAGCCCGACGAGCAG
CTTTTCGCGGAAGGAGACGAGTCCGAGGTGTGTATGTGTGTGTTTGCGAA
GGGAGGAAAAACAAATGGTTAACTGACTTTCTCCAACCAATTCTGGACAG
TGTCGATCACAGATTTTCGTCCATGGGGCCTTCTTTTACGAACAAAGACG
ACTATTGAGGTGAACGGTAGGTGTGCTTTCTAGTTATTCTACAAGCCTTG
CGTCGAGCAGCTGCTGTTGCACGACGGTAGGTATCAGTGGGGCTAAGAAG
ACTTGTTTTTGCTCGTTTACAGGAGTCATGAACACTACCGACCGCGGGTT
ATGTTCGACCCCGAGTTTTGATTGTACTCCTAATCAATACCCTCTACCCA
AGTTTTTGCTCTCTTTGTGTTGGGGACTACGATCAAATGTATACGAAAAC
CAATTTTGGTGTGCCTGATCGTGTGCTTGCGGTTCTCGGGGTGCCACGAT
AAAAACGAAACAATCATACCAGCGCCTTGAACCGCAGATTTTACTCAGCT
TGACACGCTCAACCTGGCCCGGCTCATGTGTTTCGCTGCCGCCCGCTTCC
AAGATCTGCGCCGCCGCCGTTATTCGGTACCCTGCACAGGCGGTACCATG
TAACTTGCTGTTCGAGTGTTTGGGCGTGTTTTATTCCAGCCAAACAGGAG
AGAAAACTGAACGAACTAAATCTCTCGTGAATCGCGTGGGGCTAAAAACG
TGCGCTTTACTTCATCTGTTGTCATCAATAGAGATGATATTTTCCTCCGT
TCTTGGAAACTTCTCCACTCCAACCCATGTTTGTACAGGCCTTCTACCTG
ATTCTCAGTGGCGATGTGGTGGTGTTGGTGAAAATGTGTCCGGTGGCAGT
CCTGGGGCCGGGGGAAACGTTCGGGGAGCTGGGGCTGCAAAATCTCGAGA
AAAGGACGGCAACAGTCAAGGTGAACTTCACTTTATAGAGTTCGATCACG
AGTTGGCCACAAGCGTTGTTGGAATAGTTCTTGGAGCGTACTGTCGTCGG
GCAAAGAAGACGGAAGCTACGGGGCACAGCAAAAAGCGTTGTCTTTCCGG
AGTAGTGGTGGGCTACAGCAGTAAATGGGGCCGATGTGGTGTGTGCGGAG
AGGCAAACCTTGAATAGCAGGCCAGAATGACACCTAGAACCTTAACTTAT
GGTATAGATACACGTAAGCTCTTCCCTCGCATCAATACGCCTGGTGCCAG
CAGGCCGCGAATAGGGTAGGTAGATAAAGCCGATCATATTCCTGCAACTC
TCATAGCCCTCGACAAAAGCCGCATTTCCATCAAAGGCAGAGAAAGAAAA
ATGTAGGAGACTTTCGCTAAAATATGTGCGTGGTTGTTACGCTGCGCTCT
TCGCCCAAAGGCCAACCAGTCGGGAGCTGTGCTGGTGACGATGAGAACAA
GCGATTACCGGCACATCCTGTCAAAGTTCCTCATGGACAAGATGCAGCTG
AAGGTGCGCCAAACAATTTGTTTGGGGAGCTTGGAGGGTTCTTTTGTTAA
ATGTCAACGGAACTGACAGCCAAATTGTTGTCGATTCGTTCAGTGATGCC
GCGTGCTCAAAGGCAACCCTATCTCATTATTTCATCTTCGGAGTCCCAAC
ACCATCCCAAAGGTAGTTCTTCACGGCCAACACTCCGCCCCCTTACCCCT
CCCCTCTCTTCCTCCGGAAGGTGGAGCTTCCATCGACGGAGTTGCCGATG
TATTTCCTCCGTTTGCAGTCACACTTGATGCAGCTCTCCGCTTGCAGCGT
GCGTTCGTCACTTCACAGCTAATACCGCGTGCAAACCGCTAATTTTACTT
GAGCTATTTCCGGAACCATGTTCGGGTCTGAAATTATTATCCTCGGTAGA
AGTTCCCACCCCTGGGCTGCCCCCTGCGCGAAAGCCTACAATAATTTTGT
CGAAAGTCGTGATTGGGGGGAACCTGTTTGGCCGCGAGTCAGTCGTGTTC
TTCATTCAGATTATTCCGATGCTCTCCCCTGAAATGGAGGCAGATTTCGC
CGCTGACAACGTGCTGTTCGGTTGATGCGCTCGCTATGAACACCTTTCGT
TATGTACAGATCAACCTTCTCCAAGGCACGTTCGCCCTGGCGAAAAACTG
GTCCCATTCGAAAATACGGGCGTTCGCGTATTGCATGGCGCACCACAACC
ACAGCAAGGGGGAGTATATATACAGGCAGGGAGAGTCTGCGCACAACCTC
TACATCGTATTTCGCGGGAAGGTGAGAACGCGCTACTTAGAGAGTACAGC
GAGAATAGTATCATGGAAACCGGCGGTGACATTCAAGGTGCCAAAGTAAT
GCGATCTGTCTGTTTAGGATCGCTGTTTTGGCCGTGTTTGGCGCACCCTG
AGTGCTCTACCGTCTCCTTCTGCATTGTTCATCTATCACAGGTGTTAGCC
CAGAGGGTGCTGCGGTACAGGTTCGTCAACCGTTGGCCGGTGTCCCACAA
GAAAACTCACCAGCGGAACTCAATGAAGCAGGCGAGGAGAGTTGTCGAGC
GAAATGTTTCGACGCCGCCGTGTTGCATTGACACGATCGCTCATTAGTTA
GACGCTGAACCAACCCTGGTACAGACGAAGGTTATTGCGAAGTTTTGTAT
CCTCCTGTGAAAAAAAGCCAGCCACCAGAAGGAAAAATAGCGGTTATCCC
CCTCTACCCCCCACGAGTCAGCGACTTGTAACGTCACGTAGTGGCCGAAC
GGAGTCCCCCTCCGATGTTAGGCTGTCAGAAAATGCTAAAAAATCCCGAA
GCAGATGTTAGGCCATCCTTTTAAAAAATCCCGAAGCAGATGAGCATAAA
ATCTGTTGAGTGCGCGTGGAGATAAGTTGGCTAGTGAAGTGCTTTACACC
ACTGAGACAACGTGTCCAGGCTGTTTTCGGTAATCCGAGGCACGACAAGA
CACTCCTAGATGCCATTTTTGTTTGCGCGAAACAACTCCAAAGCTTAATT
AAGGGCACCATAGATTACTGTAGAGTAAGGGGGTCGTACCAAACAAATTG
GTAGCTCTCGAACCGAAGGCGCTTCAACCGATAACGCCCTGCTGTACGCC
CCCTTACAAAGCGTAACCCCCAAAGTGTGGGTGAAAATCTCAAGCAAAGG
CGTCGCGCCCAAGAGCAGATTAGCTGCGTCCTGCGTAGTTTTAAGATCAG
ACGCCCACGCCAATAGTTGATGTTTCTGCAGCACATGGGGTTCCAACAGC
CTGCCCACTCCCACACCCGCTAGGTGACAATAAACCTGAAAACGTTGAGC
GTCGGAGACGTGACTGGAGAAGACTGCGTGTTGGGATTCGAAGCCAGACA
ATACCAGGTGATGCCATGAGAAGTGGGTGGGCGATGAGCCACGGTAGACA
ACCGGGTGGTGGCAGTTGATGCCCTGCTTCTCTCCCGGCTGTTTTATTTG
AGATTGGGAGAAACGGGTGGCCGCAATCTCGCTGTAAAGAGGGCAATTGG
AAGACTGATAAGCAAACGTCGTTGAGTACACAAAGTTTGACTGTGCAGAG
GATCGTTGACACTGCCACTTCGGCGAAACTGCTGTTTATGTTTTCTCCGG
AACAAAAGCGATGTAATAGCAAGAACGCGCAGGCTTGCACGCGCGGGGAT
CTATCTGCACCCTACCAGCGGTATCGAAAGGCGCAATTGCTAGAAATTAC
TCTTCTACGGGAAGCACTCGCCCGGAAACGATGTGAAACGATACAGAGTA
CATTTCAACGTTTTGGCTCGCTTGCAGGTGGTGGCCCTGACGCAGGATGT
GCAGGTGTGCGTGGTGAGCAGGAACAACGCCTTTCTCTATCTGACGTCGG
GAGAGCTAGATCAGCTCCATAGTCAAACACAGGTGAACGGACGAAAACGC
ATGCTCCAGGAAGAAAGCAGGAAACTTGACACATGCTGTTCCCGAAAGAA
TAGATGAGATGAAAAAGTTGTTTTCACTAGAGAGAGCAGTAAAAGTCCTC
AAACCAAAAAGTTCCATGATCTCTGCCTCAGCGACGAATCATGCCACGGT
ATTTATTATGTCTGCGCTCTTTTCCAGCTCCGAAACAACGCACATAGATA
CTCCGTACTACGACCTGCGGTAAAACCTTGATGCTGCATCCTCCCGTCGA
AAGGCGCCTCGCTTCGAAGCAGAGTGTCAACTGCGACCTTGGGTGGAGTG
AGACGCAGGAGAGAGTCCAAAATCAGAGATAATGTGCGCGAGATTGGTCT
GCATCGAAAACATAGCAACTGCACTTTTCGGTTAGTTCGGAGAATAATGG
CGTGTCCACCACAACACGCGCTACCACCGTCCGTCACCACTACAGATCCC
TCTGTATCTTGCGCGAGGGTGCAAATTCTTGTCGTAATACATATCTGAAT
TATCGTCCGCATTGTTTTAGACTAGTCTAAGGAAAACGAACGTAAAAAAA
CGACTCTGCATTATATTTTGATAGCGGACCAAAAGCGCCGTGCTTTTCTC
GCAGTCAGCAAACTGACATCACCACGATGTTTGGTGTGGGACGAGTCGCA
GCGTTTTGTCGTAAAAGCGGGCTAATTCTGACAATTCATACTCGTTGGAT
GGTTTCGTGCCCTGGCACTGTTTTTGAGCAGGAACTGTACAGATACGCGG
GAGACACGGGTACGTCCTACTACAAGGCCGTTAAGGGTTGGCAAGACGCC
AGCAGAATGAAAAACAAGGTGAGATACCTTCCCCGATTCCTCCTAATCTC
ATGTATGGGCAAGCCAAGAGTATTGGTATGTACATAGAAATAGCAAAGGT
GACAATGATTCTGGCATGCACGTGGCCCCAGCAGATGCAGATATTCTTAC
CGCAGCGCGACGTGACTCCAAGGCCAAATCCACTTGAATTGAGGGTGGGA
ATATCGACAACAACCACACAGCAGCCACCCAACAAGCCGACTCACCCTTG
CTGAAGTGGCACTTGCTGAAGTGGCACGAGAAGCACAACGAGTGCTTGCT
GCAGGGAACACCACGGACCGATACGCATAATATGTACAAAGCACTTGTTT
TCGTGATTTTAGTAAAAGCATTGTTTATTATCGTCTTCGTGGTTTTACCA
GCCCCAAAGGCGCCAAAAGCCAGAAAGTATTCAGCTCCGGCCGACAGGGA
AATATGGAAGAAACTGATACATAGCTCAATGGTCGTGTGCTGTGAGGCAT
GACCGGCCACTTTGGAAACAATCAGAAAAAAAGGGGCCCCAACAACGTCT
TCAAAACCAGAGAACGCTCCACCCCGGAGTTGGCGACCTTTAGATTCCGA
TAATCTTAGTCAGAAGGTGACAACATACAAAGTATGTTTTTTGTTCAACG
GTTCCTAGGGGGGCGGGGGGGCTGGCCCGGTACACGAGGGTTGATGCCCC
GAATTCAAGTCCGAGCTTGGTGCGAAAAATATTTTTTTCCGCGACATAAC
CGACAAATGTACTCAACTCGCAACAAGATGTTTTCGACACATGAGTTTCG
CCACGAGTGTATTTCGGGATTTCCATTTTTTACAACATACATACGCTGCA
CCTCGCTCCCATCTGGTCGTTCCTGTAGTATCGTCTTCCCTACATACATA
CACATGTAGATGCAGCATTTATATATTGCGAACATTTTTGTATGCACCTG
TATCAACTCAGGTGATCGGGCCGTCGTATCGGAATAGACTCGAGGTCAAC
GAACGGCAGATGCGAGTCAGAAAAGCGAATGGGAACACCGAGGCCCCTCG
AAGACATCAACACTGCCAACGCGAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1977:13460..21984-

>mRNA_L-elsbetiae_contig1977.5902.1 ID=mRNA_L-elsbetiae_contig1977.5902.1|Name=mRNA_L-elsbetiae_contig1977.5902.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3270bp|location=Sequence derived from alignment at L-elsbetiae_contig1977:13460..21984- (Laminarionema elsbetiae ELsaHSoW15)
ATGGACGATGGAAGCTCTCGCAGCTCGGTCTCGCTGTCTTCGAAATATAC
TCGGGGCTCGCTCTCGCAGGCTGCAAACCAATCGAAGGAAGACTCAGCAG
GATGGACGATGGAAGCTCTCGCAGCTCGGTCTCGCTGTCTTCGAAATATA
CTCGGGGCTCGCTCTCGCAGGCTGCAAACCAATCGAAGGAAGACTCAGCA
GGGCAGCACTTTGATGAAATGCTGGGCAGCGACCACAGGCAAACTATTGC
GGCGGTATCACGGCTCGCTGCGTACATGGGGCGCACAGGCAAAGGCATCA
ACCACATTTTCAAAGGCAGCACTTTGATGAAATGCTGGGCAGCGACCACA
GGCAAACTATTGCGGCGGTATCACGGCTCGCTGCGTACATGGGGCGCACA
GGCAAAGGCATCAACCACATTTTCAAAGATCTTGACTCCAGCGGCGACGG
AAAGCTTTCCCATCACGAGTTGGAACAGGCACTTGTTGAGCTGGACATCA
ACATTTCTACGGTCCAGGCTCATGCTCTCGTGAATTTTATGGATCTTGAC
TCCAGCGGCGACGGAAAGCTTTCCCATCACGAGTTGGAACAGGCACTTGT
TGAGCTGGACATCAACATTTCTACGGTCCAGGCTCATGCTCTCGTGAATT
TTATGGACAACGATGGCGATGGCGAAATCGACGTCAAGGAGTTGGATGGC
ACGATCCGCTTGTACAAGCGGCGGAAGCGAGCAGGGCAGCTAGGCACGTG
GCACGGCAACCTATCCGCCCAGCAAGACCCCGTATTTCCCAACTGGCTCA
TCGGCAGGGACGACTTTCAGCAAGTGTTTACGAGGCAAGAACCACAGGAG
GGCTCACAACGATGGCGATGGCGAAATCGACGTCAAGGAGTTGGATGGCA
CGATCCGCTTGTACAAGCGGCGGAAGCGAGCAGGGCAGCTAGGCACGTGG
CACGGCAACCTATCCGCCCAGCAAGACCCCGTATTTCCCAACTGGCTCAT
CGGCAGGGACGACTTTCAGCAAGTGTTTACGAGGCAAGAACCACAGGAGG
GCTCGTTTTCCGCCGAAGCTGGGGCCTGCGGGGTTCCAGAGGTAGAAGCT
GCTCTCCAAAAACAACCCGAAGACCGACTCCACCGAGACGTGCAAGTAAT
CACCAACTGGTTAGGCCAGCAGGTTTTCCGCCGAAGCTGGGGCCTGCGGG
GTTCCAGAGGTAGAAGCTGCTCTCCAAAAACAACCCGAAGACCGACTCCA
CCGAGACGTGCAAGTAATCACCAACTGGTTAGGCCAGCAGGATTCCCTGC
GATCTTTGGGGGCGAAACGGCTCATTGAGGTGACCAATGTGGTCGAGTGT
AAGGAGCTCAAGCCCGACGAGCAGCTTTTCGCGGAAGGAGACGAGTCCGA
GGATTCCCTGCGATCTTTGGGGGCGAAACGGCTCATTGAGGTGACCAATG
TGGTCGAGTGTAAGGAGCTCAAGCCCGACGAGCAGCTTTTCGCGGAAGGA
GACGAGTCCGAGGCCTTCTACCTGATTCTCAGTGGCGATGTGGTGGTGTT
GGTGAAAATGTGTCCGGTGGCAGTCCTGGGGCCGGGGGAAACGTTCGGGG
AGCTGGGGCTGCAAAATCTCGAGAAAAGGACGGCAACAGTCAAGGCCTTC
TACCTGATTCTCAGTGGCGATGTGGTGGTGTTGGTGAAAATGTGTCCGGT
GGCAGTCCTGGGGCCGGGGGAAACGTTCGGGGAGCTGGGGCTGCAAAATC
TCGAGAAAAGGACGGCAACAGTCAAGGCCAACCAGTCGGGAGCTGTGCTG
GTGACGATGAGAACAAGCGATTACCGGCACATCCTGTCAAAGTTCCTCAT
GGACAAGATGCAGCTGAAGGCCAACCAGTCGGGAGCTGTGCTGGTGACGA
TGAGAACAAGCGATTACCGGCACATCCTGTCAAAGTTCCTCATGGACAAG
ATGCAGCTGAAGATCAACCTTCTCCAAGGCACGTTCGCCCTGGCGAAAAA
CTGGTCCCATTCGAAAATACGGGCGTTCGCGTATTGCATGGCGCACCACA
ACCACAGCAAGGGGGAGTATATATACAGGCAGGGAGAGTCTGCGCACAAC
CTCTACATCGTATTTCGCGGGAAGATCAACCTTCTCCAAGGCACGTTCGC
CCTGGCGAAAAACTGGTCCCATTCGAAAATACGGGCGTTCGCGTATTGCA
TGGCGCACCACAACCACAGCAAGGGGGAGTATATATACAGGCAGGGAGAG
TCTGCGCACAACCTCTACATCGTATTTCGCGGGAAGGTGTTAGCCCAGAG
GGTGCTGCGGTACAGGTTCGTCAACCGTTGGCCGGTGTCCCACAAGAAAA
CTCACCAGCGGAACTCAATGAAGCAGGCGAGGAGAGTGTTAGCCCAGAGG
GTGCTGCGGTACAGGTTCGTCAACCGTTGGCCGGTGTCCCACAAGAAAAC
TCACCAGCGGAACTCAATGAAGCAGGCGAGGAGAGTGACAATAAACCTGA
AAACGTTGAGCGTCGGAGACGTGACTGGAGAAGACTGCGTGTTGGGATTC
GAAGCCAGACAATACCAGGTGACAATAAACCTGAAAACGTTGAGCGTCGG
AGACGTGACTGGAGAAGACTGCGTGTTGGGATTCGAAGCCAGACAATACC
AGGTGGTGGCCCTGACGCAGGATGTGCAGGTGTGCGTGGTGAGCAGGAAC
AACGCCTTTCTCTATCTGACGTCGGGAGAGCTAGATCAGCTCCATAGTCA
AACACAGGTGGTGGCCCTGACGCAGGATGTGCAGGTGTGCGTGGTGAGCA
GGAACAACGCCTTTCTCTATCTGACGTCGGGAGAGCTAGATCAGCTCCAT
AGTCAAACACAGCAGGAACTGTACAGATACGCGGGAGACACGGGTACGTC
CTACTACAAGGCCGTTAAGGGTTGGCAAGACGCCAGCAGAATGAAAAACA
AGCAGGAACTGTACAGATACGCGGGAGACACGGGTACGTCCTACTACAAG
GCCGTTAAGGGTTGGCAAGACGCCAGCAGAATGAAAAACAAGGTGATCGG
GCCGTCGTATCGGAATAGACTCGAGGTCAACGAACGGCAGATGCGAGTCA
GAAAAGCGAATGGGAACACCGAGGCCCCTCGAAGACATCAACACTGCCAA
CGCGAGGTGATCGGGCCGTCGTATCGGAATAGACTCGAGGTCAACGAACG
GCAGATGCGAGTCAGAAAAGCGAATGGGAACACCGAGGCCCCTCGAAGAC
ATCAACACTGCCAACGCGAG
back to top