prot_L-elsbetiae_contig1973.5890.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1973.5890.1
Unique Nameprot_L-elsbetiae_contig1973.5890.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length950
Homology
BLAST of mRNA_L-elsbetiae_contig1973.5890.1 vs. uniprot
Match: D7G3J8_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3J8_ECTSI)

HSP 1 Score: 622 bits (1604), Expect = 5.770e-206
Identity = 437/834 (52.40%), Postives = 496/834 (59.47%), Query Frame = 0
Query:  109 DAGAEAAQRKALALRRREWDSGGDGSASSEAAGLGERQSPASDPSAPGVDSSGVAAAAKRAALPCLRNLASFVANQGRHADAEIVLRTVLSILEQQREELRK---GSLGRKNTDKDNDGFGGGKSALLALSSPSPLADGGGERVDTDVSFSGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEPKT--------ERPRSTTPKASTA-----------------------SVAFAAEDAVDSXXXXXXXXXXXXXXXXXXXXGAPPSSRETSPGADPAARNGASPAXXXXXXXXXXXXXXXXRETGPGTGRCSGSGELRESSLARSRLGERRHRESGGD-RGVEDWEAEAAGRDDEDPEQMAAVTRHHLAVVVHAQGRAEEAELLLEESLRVLKGREPPQAVWVAQALHDLARVVRPRQPGRACALYRDALQLLEDTRGVNHFLTAPTLAKLGSLLGECLITA---PISPAXXXXXXXXXXXRAAGLAEAVCAPAEHAAGSSTTAEAVAAAAGDGWDAKEAEAMIKRAILIQGRHLGLRHPAVASSMRAMAELYRRQGRLSEAEPLFRRAVGIWEVSPGP--MDSDAVAALHGLAHCVLAGAGADWLGRFEEAFALVDQAYRIASSQPGNDPSSRLLLEALRMIRSRQRQGRGDPQPASATIMEGVWSGRWDPAKHG--SGGSXXXXXXXXXXDN----PRCAVCLEEVGGGGEARVSGREKAETDRSGAAPEGRGVEVSGPAAAAASDWAADIGSDGASLAE-ADNAHAKGSFAYLPCGHRFHTHCIGRWLAHSSSCPSCRCRVEEEESP 895
            +AGAEAAQR ALALR REW+ G DG   +     G    P +  ++  ++ S    AAKRAA+PCLRNLASFV+NQGRH DAE+VLRTVL+IL   + +L        G++  D      GGG     A  +PS   +   +R D   + +G+P  XX                                              A   T        + P  + P A TA                       + A  AE+ V S                       PSS   +   + A R+ ASPAXXXXXX             GP  GR  G   L ES L   + G     ESGGD RG+ED E    G +DE+P+QMAAVTRHHLAVV+HAQGRA+EAE LLE+SLRVLK R+PPQAV VAQA+HDLA +VRP  P RAC LYR AL+ LED RGVNHFLTAPTLAKLG+LLGE L+ A   PI+PA           R+AGLAEAVCA A       +   AVAAAAG  WD K+AE MIKRA+LIQGRHLGLRHPAVASSMRAMAELYRRQGRL+EAEPLFRRA+GIWE+S G   MDSDA+AALHG AHCVLAGAGADWLGRFEEAFALVDQAYRIASS PGND SSRLLLEALRMIRSRQRQGRGDPQPASA IMEGVW+GRWDPAK+   SGG            N    PRCAVCLEEVGGG E  V G                G E         +DW ADIGS+    AE A++ HA GSFAYLPCGHRFHTHCIGRWLAHSSSCPSCR +VEEE  P
Sbjct:   28 NAGAEAAQRHALALRCREWE-GRDGGVFAGGDRPGGDAGPGAGSNSGLLNPSSAVVAAKRAAVPCLRNLASFVSNQGRHVDAEVVLRTVLNILRDYKRQLSSQHHDGKGKREADAPLLDGGGGFGTDSASFTPSSFEE---KRSDEAQADAGSPAPXXTPDTRNGGTRNGSPAAHPTTEPPPLSAVPETGIAGGDESLGRDGSTANTTTGGDAYESGDPPAGSRPSAETAGGGSXXXXXXXXXXDNLRSHAAQATAALAEETVASAMVAATRAVAVMGETAATLE---PSSLVVN--HNRATRSDASPAXXXXXXVPLMKQA----SAGPTAGRRGG--RLEESRLPGMKFG---RGESGGDERGLEDVE----GGEDEEPDQMAAVTRHHLAVVIHAQGRAKEAEQLLEDSLRVLKRRKPPQAVCVAQAMHDLAGIVRPADPARACTLYRQALKTLEDARGVNHFLTAPTLAKLGALLGESLVAAADIPITPAQPAGPGCAGIQRSAGLAEAVCASAGCGVEDGS---AVAAAAGVDWDPKKAEEMIKRAVLIQGRHLGLRHPAVASSMRAMAELYRRQGRLAEAEPLFRRAIGIWELSRGGGGMDSDAIAALHGTAHCVLAGAGADWLGRFEEAFALVDQAYRIASSHPGNDASSRLLLEALRMIRSRQRQGRGDPQPASAAIMEGVWTGRWDPAKNDGTSGGGATQGRHVRSRSNGDGNPRCAVCLEEVGGG-EPTVDGG-------------ALGREGXXXXXXXXADWTADIGSEEGLRAETAESVHASGSFAYLPCGHRFHTHCIGRWLAHSSSCPSCRSQVEEETIP 822          
BLAST of mRNA_L-elsbetiae_contig1973.5890.1 vs. uniprot
Match: A0A6H5JNZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNZ5_9PHAE)

HSP 1 Score: 416 bits (1068), Expect = 4.540e-130
Identity = 312/640 (48.75%), Postives = 356/640 (55.62%), Query Frame = 0
Query:  109 DAGAEAAQRKALALRRREWDSGGDGSASSEAAGLGERQSPASDPSAPGVDS-----SGVAAAAKRAALPCLRNLASFVANQGRHADAEIVLRTVLSILEQQREELRK---GSLGRKNTDKDNDGFGGGKSALLALSSPSPLADGGGERVDTDVSFSGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAEPKTERPRSTTPKASTASVAFAAEDAVDSXXXXXXXXXXXXXXXXXXXXGAPPSSR------ETSPGADP--------AARNGASPAXXXXXXXXXXXXXXXXRETGPGTGRCSGSGELRESSLARSRLGERRHRESGGD-RGVEDWEAEAAGRDDEDPEQMAAVTRHHLAVVVHAQGRAEEAELLLEESLRVLKGREPPQAVWVAQALHDLARVVRPRQPGRACALYRDALQLLEDTRGVNHFLTAPTLAKLGSLLGECLITA---PISPAXXXXXXXXXXXRAAGLAEAVCAPAEHAAGSSTTAEAVAAAAGDGWDAKEAEAMIKRAILIQGRHLGLRHPAVASSMRAMAELYRRQGRLSEAEPLFRRAVGIWEVSPGP--MDSDAVAALHGLAHCVLAGAGADWLGRFEEAFALVDQAYRIASSQPG 720
            DAGAEAAQR ALALR REW+    G      AG G ++  A   +  G DS     S    AAKRAA+PCLRNLASFV+NQGRH DAE+VLRTVL+IL   +++L        G++  D      GGG     A  +PS   +   +    DV                                                       +A      P  + P A TA                                    ++R      ET+   +P        A R+ ASPAXXXXXX             GP  GR  G   L ES L   +       ESG D RG+ED E    G +DEDP+QMAAVTRH LAVV+HAQGRA+EAE LLE+SLRVLK R+PPQAV VAQA+HDLA +VRP  P RAC LYR AL+ LE   GV+HFLT PTLAKLG+LLGE L+ A   PI+PA           R+AGLAEAVCA A      S+   AVAAAAG  WD K+AE MIKRA  IQGR LGLRHP VASSMRAMAELYRRQGRL+EAEPLFRRA+GIWEVS G   MDSDA+AALHG AHCVLAGAGADWLGRFEEAFALVDQAYRIASS PG
Sbjct:   28 DAGAEAAQRHALALRCREWEDRDGG----VFAGGGRQEGDAGRGA--GCDSGLLDPSSAVVAAKRAAVPCLRNLASFVSNQGRHVDAEVVLRTVLNILRDYKQQLSSQHHDGKGKREADAPQLDGGGGFGTHSASFTPSSFEERRSDEARADVGSPAPSPTPETHDGSPAAHPTTAPPPLSAVPEVGIAGRYESLGRDGSTANPTTGGDAYESGNTPAGSRPSAETAGXXXXXXXVEGDDLRSQAAQATAALAEETVASAMAAATRAVAVMGETAATLEPSLVVNHNRATRSDASPAXXXXXXVPLMKQA----SAGPTAGRRGG--RLEESRLPGMKFA---GGESGDDERGLEDVE----GGEDEDPDQMAAVTRHRLAVVIHAQGRAKEAEQLLEDSLRVLKRRKPPQAVCVAQAMHDLAGIVRPADPARACTLYRQALKTLEGACGVDHFLTTPTLAKLGALLGESLVAAADIPITPAQPAGPGCAGIQRSAGLAEAVCASAGCGVEDSS---AVAAAAGVDWDPKKAEEMIKRAAFIQGRFLGLRHPTVASSMRAMAELYRRQGRLAEAEPLFRRAIGIWEVSGGEGGMDSDAIAALHGTAHCVLAGAGADWLGRFEEAFALVDQAYRIASSHPG 645          
BLAST of mRNA_L-elsbetiae_contig1973.5890.1 vs. uniprot
Match: A0A6H5JPJ0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ0_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 1.230e-50
Identity = 109/182 (59.89%), Postives = 116/182 (63.74%), Query Frame = 0
Query:  721 NDPSSRLLLEALRMIRSRQRQGRGDPQPASATIMEGVWSGRWDPAKHGSGGSXXXXXXXXXXD------NPRCAVCLEEVGGGGEARVSGREKAETDRSGAAPEGRGVEVSGPAAAAASDWAADIGSDGASLAEA-DNAHAKGSFAYLPCGHRFHTHCIGRWLAHSSSCPSCRCRVEEEESP 895
            +D  SRLLLEALRMI SRQRQGRGDPQPASA IMEGVW+GRWDPAK+G                     NPRCAVCLE VGGG E  V G              G      G  AAAA+DW ADIGSD    AE  ++ HA  SFAYLPCGHRFHTHCIGRWL HSSSCPSCR +VEEE  P
Sbjct:    7 SDACSRLLLEALRMIGSRQRQGRGDPQPASAAIMEGVWTGRWDPAKNGGSSRGDATQGRHARSPGNGDGNPRCAVCLEAVGGG-EPTVDG--------------GALGREGGGRAAAAADWTADIGSDEGLRAETMESVHASRSFAYLPCGHRFHTHCIGRWLVHSSSCPSCRSQVEEETIP 173          
BLAST of mRNA_L-elsbetiae_contig1973.5890.1 vs. uniprot
Match: A0A6H5JPD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPD7_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 5.460e-7
Identity = 43/108 (39.81%), Postives = 54/108 (50.00%), Query Frame = 0
Query:    1 MSLARVDQPGETGEASSTPAGDSSLLALEEKAKRLLKRCRYAEAGRCFKQVLREVGVELAAFDATNSSTXXXXXXXXXXXXXSCGRSRMAREIGAFEGLAICLSRQLD 108
            MS  RV+Q      +S + A   SL ALEEKA+RLLKR RY +A + FK +L    V+  A                        +   + EIGA EGLAICLSRQL+
Sbjct:    1 MSAPRVEQASAGDISSGSHAAGPSLQALEEKARRLLKRRRYDDAAKTFKTILEVAQVQRDAAAGRGRQQQQQHWPDP--------KRIWSLEIGALEGLAICLSRQLE 100          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1973.5890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G3J8_ECTSI5.770e-20652.40TPR repeat-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JNZ5_9PHAE4.540e-13048.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPJ0_9PHAE1.230e-5059.89RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JPD7_9PHAE5.460e-739.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 787..885
e-value: 2.0E-5
score: 34.1
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 860..886
e-value: 1.3E-8
score: 35.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 861..886
score: 9.612
NoneNo IPR availablePFAMPF13424TPR_12coord: 611..666
e-value: 6.3E-9
score: 36.0
NoneNo IPR availablePFAMPF13374TPR_10coord: 459..488
e-value: 0.0023
score: 17.8
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 444..553
coord: 601..715
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 858..891
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 440..555
e-value: 4.7E-11
score: 44.2
coord: 575..751
e-value: 1.0E-20
score: 75.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 175..534
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 610..714

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1973contigL-elsbetiae_contig1973:5898..14206 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1973.5890.1mRNA_L-elsbetiae_contig1973.5890.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1973 5898..14206 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1973.5890.1 ID=prot_L-elsbetiae_contig1973.5890.1|Name=mRNA_L-elsbetiae_contig1973.5890.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=950bp
MSLARVDQPGETGEASSTPAGDSSLLALEEKAKRLLKRCRYAEAGRCFKQ
VLREVGVELAAFDATNSSTSTSTSTSTSTSTSSCGRSRMAREIGAFEGLA
ICLSRQLDDAGAEAAQRKALALRRREWDSGGDGSASSEAAGLGERQSPAS
DPSAPGVDSSGVAAAAKRAALPCLRNLASFVANQGRHADAEIVLRTVLSI
LEQQREELRKGSLGRKNTDKDNDGFGGGKSALLALSSPSPLADGGGERVD
TDVSFSGAPPPPSSSGVAEEKHSDQRPGGGAPSAPPSSLPLETTVSGGSS
SSSGGGTEEAEPKTERPRSTTPKASTASVAFAAEDAVDSATSTAASAAAA
AARESTPPTGAPPSSRETSPGADPAARNGASPAPPPPSPLPPTKQQQQQR
ETGPGTGRCSGSGELRESSLARSRLGERRHRESGGDRGVEDWEAEAAGRD
DEDPEQMAAVTRHHLAVVVHAQGRAEEAELLLEESLRVLKGREPPQAVWV
AQALHDLARVVRPRQPGRACALYRDALQLLEDTRGVNHFLTAPTLAKLGS
LLGECLITAPISPAAPAGPGAAGVARAAGLAEAVCAPAEHAAGSSTTAEA
VAAAAGDGWDAKEAEAMIKRAILIQGRHLGLRHPAVASSMRAMAELYRRQ
GRLSEAEPLFRRAVGIWEVSPGPMDSDAVAALHGLAHCVLAGAGADWLGR
FEEAFALVDQAYRIASSQPGNDPSSRLLLEALRMIRSRQRQGRGDPQPAS
ATIMEGVWSGRWDPAKHGSGGSGGDEEDGGGGDNPRCAVCLEEVGGGGEA
RVSGREKAETDRSGAAPEGRGVEVSGPAAAAASDWAADIGSDGASLAEAD
NAHAKGSFAYLPCGHRFHTHCIGRWLAHSSSCPSCRCRVEEEESPVTSTP
AVAHAGEVGADSAAAAAAPPAEAGAATRSVGSQAGQPGGEEGGGDGGRSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR011990TPR-like_helical_dom_sf