prot_L-elsbetiae_contig1967.5866.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1967.5866.1
Unique Nameprot_L-elsbetiae_contig1967.5866.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length251
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1967.5866.1 vs. uniprot
Match: D7FZC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZC5_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 1.300e-30
Identity = 122/190 (64.21%), Postives = 135/190 (71.05%), Query Frame = 0 
Query:    2 VASLLYLQPCRFRILSSKPPYTKGVVTAVPAPFVASL---GPFGEAGLERADLIVSINGAPFGKDPDGRWWEDATAGAVRPGTAGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKENRNATAVASAQKTGAGRLHLPFVELGVLRATGETSNTVMHAGSLAAQKAWVALRLLQ 188
            +ASLLYL P ++R+LSSKPPYT+G  + VPAPFV S    GPFGEAGLE  DLI++ING  FG++   RWW                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKENR       A + G  R+ LPFVEL +LRATGETSNTV HA SLAAQKAWVA RLLQ
Sbjct:  417 LASLLYLHPLKYRVLSSKPPYTRGYTSLVPAPFVVSATSQGPFGEAGLEGGDLILAINGERFGEERS-RWWXXXXXXXXX-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKENRGG-----ASRPGPRRVELPFVELRILRATGETSNTVAHAESLAAQKAWVAFRLLQ 587
[Close]
BLAST of mRNA_L-elsbetiae_contig1967.5866.1 vs. uniprot
Match: A0A6H5JA82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA82_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.790e-24
Identity = 129/277 (46.57%), Postives = 149/277 (53.79%), Query Frame = 0 
Query:    2 VASLLYLQPCRFRILSSK------------------------------------PPYTKGVVTAVPAPFVASL---GPFGEAGLERADLIVSINGAPFGKDPDGRWWEDATAGAVRPGTAGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKENRNATAVASAQKTGAGRLHLPFVELGVLRATGETSNTVMHAGSLAAQKAWVALRLLQXXXXXXXXXXXRSPSMVLRLTERTSKARIGLWPAASRGMRSSLPQGWSVAW 239
            +ASLLYL P ++R+LSSK                                    PPYT+G  + VPAPFV S    GPF EAGLE  DLI++ING  FG++   RW                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKENR       A + G  R+ LPFVEL +LRATGETSNTV HA S AA+KAWVALRLLQ            +    L  +  + +AR   WP ASR      P+ W+  W
Sbjct:  418 LASLLYLHPLKYRVLSSKTRLCACCPWITPRVACLNFTHEMNDNARAQRNTTARPPYTRGYTSLVPAPFVVSATSQGPFEEAGLESGDLILAINGERFGEESS-RWXXXXXXXXXX--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKENRGG-----ASRAGPRRVELPFVELRILRATGETSNTVAHAESPAAEKAWVALRLLQQQQSLVINNVLPN---FLDESPLSKQARTRRWPIASRETPLHFPRSWTRGW 671
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1967.5866.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZC5_ECTSI1.300e-3064.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA82_9PHAE1.790e-2446.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1967contigL-elsbetiae_contig1967:6115..10776 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1967.5866.1mRNA_L-elsbetiae_contig1967.5866.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1967 6029..12055 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1967.5866.1 ID=prot_L-elsbetiae_contig1967.5866.1|Name=mRNA_L-elsbetiae_contig1967.5866.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=251bp
MVASLLYLQPCRFRILSSKPPYTKGVVTAVPAPFVASLGPFGEAGLERAD
LIVSINGAPFGKDPDGRWWEDATAGAVRPGTAGTGGGGGGGGEGGRRGGE
SLQGSGAANNNGSDGGGGPAAAPPGRGGGKENRNATAVASAQKTGAGRLH
LPFVELGVLRATGETSNTVMHAGSLAAQKAWVALRLLQQQQSLVPPPPPR
SPSMVLRLTERTSKARIGLWPAASRGMRSSLPQGWSVAWPPCPETKPTRR
*
back to top