prot_L-elsbetiae_contig1967.5868.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1967.5868.1
Unique Nameprot_L-elsbetiae_contig1967.5868.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length225
Homology
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BLAST of mRNA_L-elsbetiae_contig1967.5868.1 vs. uniprot
Match: A0A6H5JA82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA82_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 8.700e-14
Identity = 47/64 (73.44%), Postives = 51/64 (79.69%), Query Frame = 0 
Query:    2 AEPVLAGRKIVRQLMHVNGVEADELTLTELRASLLSEDALSLAQEGQEHDDTAAVSYVFCHVPI 65
            A P+ AGRK+VRQLM VNGVEADELTL E  AS+LSEDALSLAQEG    DTAAVSY  CHV +
Sbjct: 1027 AMPMPAGRKMVRQLMFVNGVEADELTLAE--ASVLSEDALSLAQEG----DTAAVSYAVCHVSV 1084
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BLAST of mRNA_L-elsbetiae_contig1967.5868.1 vs. uniprot
Match: D7FZC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZC5_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 3.620e-11
Identity = 42/54 (77.78%), Postives = 45/54 (83.33%), Query Frame = 0 
Query:    2 AEPVLAGRKIVRQLMHVNGVEADELTLTELRASLLSEDALSLAQEGQEHDDTAA 55
            A P+ AGRK+VRQLM VNGVEADELTL EL AS+LSEDALSLAQEG    DTAA
Sbjct:  995 AMPMPAGRKMVRQLMFVNGVEADELTLAELHASVLSEDALSLAQEG----DTAA 1044
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1967.5868.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JA82_9PHAE8.700e-1473.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZC5_ECTSI3.620e-1177.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1967contigL-elsbetiae_contig1967:14629..16654 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1967.5868.1mRNA_L-elsbetiae_contig1967.5868.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1967 14629..16654 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1967.5868.1 ID=prot_L-elsbetiae_contig1967.5868.1|Name=mRNA_L-elsbetiae_contig1967.5868.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp
VAEPVLAGRKIVRQLMHVNGVEADELTLTELRASLLSEDALSLAQEGQEH
DDTAAVSYVFCHVPISVAEAEAEAAAAAAAAQPAAQQAASATAAPALAVA
VAPAAPGPQQAAQAPAAAAGAAAAVAAGGGAPATGVGRALPVTPRLGGGA
QPPPPVAAAATAAELPAEPSTPGQVGATNHQDAGKADTTVSSAPARPAAA
AAAAARGDNGHHTKKLRNGGGNGPA
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