Homology
BLAST of mRNA_L-elsbetiae_contig19648.5856.1 vs. uniprot
Match:
A0A6H5KKU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKU6_9PHAE)
HSP 1 Score: 114 bits (286), Expect = 8.970e-28
Identity = 52/64 (81.25%), Postives = 56/64 (87.50%), Query Frame = 2
Query: 2 MLDGMTKDELDALYRLIYGKKGPGMSRYGTKVLMQELFRAVLKHWRSTNSGKEDCAKFFVDRGG 193
MLD M D+L+ALYRL +GKKGPGMSRYGTK LMQELFR V KHWR+TN GKEDCAKFFVDRGG
Sbjct: 339 MLDSMKMDDLEALYRLCFGKKGPGMSRYGTKALMQELFRDVAKHWRTTNFGKEDCAKFFVDRGG 402
BLAST of mRNA_L-elsbetiae_contig19648.5856.1 vs. uniprot
Match:
A0A6H5JSZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSZ5_9PHAE)
HSP 1 Score: 107 bits (266), Expect = 4.440e-25
Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 2
Query: 2 MLDGMTKDELDALYRLIYGKKGPGMSRYGTKVLMQELFRAVLKHWRSTNSGKEDCAKFFVDRGG 193
ML+GMTKD+LDALY L +GK GPGMSRY TK LMQ+LF+ V +HW TN GKEDCAKFFVDRGG
Sbjct: 609 MLEGMTKDDLDALYCLCFGKNGPGMSRYSTKALMQKLFKDVAEHWGKTNFGKEDCAKFFVDRGG 672
BLAST of mRNA_L-elsbetiae_contig19648.5856.1 vs. uniprot
Match:
A0A6H5JJM9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM9_9PHAE)
HSP 1 Score: 107 bits (266), Expect = 4.510e-25
Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 2
Query: 2 MLDGMTKDELDALYRLIYGKKGPGMSRYGTKVLMQELFRAVLKHWRSTNSGKEDCAKFFVDRGG 193
ML+GMTKD+LDALY L +GK GPGMSRY TK LMQ+LF+ V +HW TN GKEDCAKFFVDRGG
Sbjct: 796 MLEGMTKDDLDALYCLCFGKNGPGMSRYSTKALMQKLFKDVAEHWGKTNFGKEDCAKFFVDRGG 859
BLAST of mRNA_L-elsbetiae_contig19648.5856.1 vs. uniprot
Match:
A0A6H5K1E3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1E3_9PHAE)
HSP 1 Score: 78.6 bits (192), Expect = 4.530e-15
Identity = 35/63 (55.56%), Postives = 47/63 (74.60%), Query Frame = 2
Query: 2 MLDGMTKDELDALYRLIYGKKGPGMSRYGTKVLMQELFRAVLKHWRSTNSGKEDCAKFFVDRG 190
ML+G + D L LYRL +G + PG+SRY +VL+ ELF+ V K WR +N GKEDC+KFF++RG
Sbjct: 338 MLEGTSLDGLMDLYRLCFGPRAPGISRYPNRVLLIELFKTVEKLWRESNHGKEDCSKFFMERG 400
BLAST of mRNA_L-elsbetiae_contig19648.5856.1 vs. uniprot
Match:
A0A6H5JVZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVZ9_9PHAE)
HSP 1 Score: 77.0 bits (188), Expect = 1.540e-14
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 2
Query: 2 MLDGMTKDELDALYRLIYGKKGPGMSRYGTKVLMQELFRAVLKHWRSTNSGKEDCAKFFVDRG 190
ML+GM+ D L LYRL +G + PG SRY +VL+ +LF+ V K WR +N GKEDC+ FF++RG
Sbjct: 1 MLEGMSLDGLKDLYRLCFGPRAPGNSRYPNRVLLIDLFKTVEKLWRESNHGKEDCSTFFMERG 63
BLAST of mRNA_L-elsbetiae_contig19648.5856.1 vs. uniprot
Match:
A0A6H5JPN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN7_9PHAE)
HSP 1 Score: 68.2 bits (165), Expect = 1.130e-11
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 2
Query: 2 MLDGMTKDELDALYRLIYGKKGPGMSRYGTKVLMQELFRAVLKHWRSTNSGKEDCA 169
ML+GM+ D L LYRL +G + PG SRY +VL+ ELF+ V K WR +N GKEDC+
Sbjct: 187 MLEGMSLDGLKDLYRLCFGPRAPGNSRYPNRVLLIELFKTVEKLWRESNHGKEDCS 242
BLAST of mRNA_L-elsbetiae_contig19648.5856.1 vs. uniprot
Match:
A0A6H5KMZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMZ3_9PHAE)
HSP 1 Score: 49.3 bits (116), Expect = 8.080e-5
Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 1
Query: 184 QGGVLVSSGVEGGYTPDGIMLCHMFMLR 267
+G LVSSGVEGGY+PDG+ CHMFMLR
Sbjct: 3 RGAWLVSSGVEGGYSPDGVQTCHMFMLR 30
BLAST of mRNA_L-elsbetiae_contig19648.5856.1 vs. uniprot
Match:
A0A6H5JRG8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG8_9PHAE)
HSP 1 Score: 49.3 bits (116), Expect = 8.810e-5
Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 2
Query: 2 MLDGMTKDELDALYRLIYGKKGPGMSRYGT 91
ML+GMTKD+LDALY L +GK GPGMSR T
Sbjct: 532 MLEGMTKDDLDALYCLCFGKNGPGMSRSNT 561
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19648.5856.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19648.5856.1
>prot_L-elsbetiae_contig19648.5856.1 ID=prot_L-elsbetiae_contig19648.5856.1|Name=mRNA_L-elsbetiae_contig19648.5856.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp
DAGRHDQGRARRVISLDLWEEGAGNEQIRHEGADAGAVPGCVEALAEHKF
RKGGLCQVLRGQGGVLVSSGVEGGYTPDGIMLCHMFMLR
back to topmRNA from alignment at L-elsbetiae_contig19648:3..579+
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig19648.5856.1 ID=mRNA_L-elsbetiae_contig19648.5856.1|Name=mRNA_L-elsbetiae_contig19648.5856.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=577bp|location=Sequence derived from alignment at L-elsbetiae_contig19648:3..579+ (Laminarionema elsbetiae ELsaHSoW15)
GATGCTGGACGGCATGACCAAGGACGAGCTAGACGCGTTATATCGCTTGA
TCTATGGGAAGAAGGGGCCGGGAATGAGCAGGTGAGTCGATGTGTATAGA
CATGACCTTTTGCTGCTCCTCGAAATATTCACGGAGTATGGTTTGTTTCT
CCTTTGTTTTCGGGTATATTGCGGTCAAATTGCCGGAGATGGCGGTTGAT
TCAGAACCGAAAATATTTGTGGAAATTTGGCAAGAAGATAGCTCAACTTT
AAAGATGCAGCGATGTAGAAGAAACGGGGGCTTTTTTCCGGGCCTCGCAG
ATAGGATACTGGTCGTACCCGTGTCCCGTGGAATCAGGTTTGTTTCCTGT
CTGTCTCGTGTGTGCTGCCCTGCCCCCCGCTTCTTGCAGATACGGCACGA
AGGTGCTGATGCAGGAGCTGTTCCGGGCTGTGTTGAAGCATTGGCGGAGC
ACAAATTCCGGAAAGGAGGACTGTGCCAAGTTCTTCGTGGACAGGGGGGG
GTGTTGGTGTCGTCTGGTGTCGAGGGCGGATATACACCAGACGGGATCAT
GTTGTGCCACATGTTCATGCTACGCGC
back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig19648:3..579+
>mRNA_L-elsbetiae_contig19648.5856.1 ID=mRNA_L-elsbetiae_contig19648.5856.1|Name=mRNA_L-elsbetiae_contig19648.5856.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=534bp|location=Sequence derived from alignment at L-elsbetiae_contig19648:3..579+ (Laminarionema elsbetiae ELsaHSoW15)
GATGCTGGACGGCATGACCAAGGACGAGCTAGACGCGTTATATCGCTTGA
TCTATGGGAAGAAGGGGCCGGGAATGAGCAGGATGCTGGACGGCATGACC
AAGGACGAGCTAGACGCGTTATATCGCTTGATCTATGGGAAGAAGGGGCC
GGGAATGAGCAGATACGGCACGAAGGTGCTGATGCAGGAGCTGTTCCGGG
CTGTGTTGAAGCATTGGCGGAGCACAAATTCCGGAAAGGAGGACTGTGCC
AAGTTCTTCGTGGACAGGGGGGGGTGTTGGTGTCGTCTGGTGTCGAGGGC
GGATATACACCAGACGGGATCATGTTGTGCCACATGTTCATGCTACGCAT
ACGGCACGAAGGTGCTGATGCAGGAGCTGTTCCGGGCTGTGTTGAAGCAT
TGGCGGAGCACAAATTCCGGAAAGGAGGACTGTGCCAAGTTCTTCGTGGA
CAGGGGGGGGTGTTGGTGTCGTCTGGTGTCGAGGGCGGATATACACCAGA
CGGGATCATGTTGTGCCACATGTTCATGCTACGC
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