Homology
BLAST of mRNA_L-elsbetiae_contig1957.5829.1 vs. uniprot
Match:
D7G7A0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A0_ECTSI)
HSP 1 Score: 167 bits (423), Expect = 2.280e-42
Identity = 117/181 (64.64%), Postives = 120/181 (66.30%), Query Frame = 1
Query: 673 FAGTNGNGAMHARTGSNG-EDFSDFQGSXXXXXXXXXAAXXX------GAATXXXXXXXXXXXXXXXXANGGVTNPKWRDVSSLVDLGGLSSNTEKKVAQQKVVEQTFQSNNNSFAGLDGFKKPQPQGMGMNRPLSGMTGLSGXXXXXXXXXXXXXXXXGAQQPMPQQQ-----MQGGWMG 1179
FAG NGNGA+HAR S G EDFSDFQGS XXXXXXX XXX GAAT NG VTNPKWRDVSSLVDLGGLSSNT+KKVA+QKVVEQTFQSNNNSFAGLDGFK PQPQGMGMNRPLSGMTGLSG G QQP MQGGWMG
Sbjct: 292 FAGNNGNGAVHARAPSTGNEDFSDFQGSSSXXXXXXXXXXXXXXXXXTGAAT-----------------NGAVTNPKWRDVSSLVDLGGLSSNTDKKVAEQKVVEQTFQSNNNSFAGLDGFKAPQPQGMGMNRPLSGMTGLSGGAGTGMMMGGGM----GVQQPXXXXXXXXXXMQGGWMG 451
BLAST of mRNA_L-elsbetiae_contig1957.5829.1 vs. uniprot
Match:
A0A6H5JZR7_9PHAE (ENTH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZR7_9PHAE)
HSP 1 Score: 80.9 bits (198), Expect = 1.440e-12
Identity = 69/156 (44.23%), Postives = 75/156 (48.08%), Query Frame = 1
Query: 493 GLFGQEFSGFSAAPVXXXXXXXXXXXQPFGTGGAAFADPFVAAPTPLATATSAMSGGGGGFAGTNGNGAMHARTGSNG-EDFSDFQGSXXXXXXXXX----AAXXXGAATXXXXXXXXXXXXXXXXANGGVTNPKWRDVSSLVDLGGLSSNTEKKV 945
G+FGQ+FSGFSA P XXXX FA F+G NGNGA+HAR S G EDFSDFQG A+ GAAT NG VTNPKWRDVSSLVDLGGLSSNT+KKV
Sbjct: 425 GVFGQDFSGFSAVPAAGQPLGAXXXXXXXXXXXXPFAXXXXXXXXXXXXXXXXXXXXXXXFSGNNGNGAVHARAPSTGNEDFSDFQGCSGAPGGGGETTGAASGGTGAAT-----------------NGAVTNPKWRDVSSLVDLGGLSSNTDKKV 563
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1957.5829.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 2.28e-42 / Id = 64.64 Expect = 1.44e-12 / Id = 44.23 Sequence D7G7A0_ECTSI A0A6H5JZR7_9PHAE
Match Name E-value Identity Description
D7G7A0_ECTSI 2.280e-42 64.64 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZR7_9PHAE 1.440e-12 44.23 ENTH domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 168.3
Seed ortholog evalue 8.5e-39
Seed eggNOG ortholog 2880.D7G7A0
KEGG ko ko:K12471,ko:K12486,ko:K14297
KEGG TC 1.I.1
KEGG Pathway ko03013,ko04144,ko05164,map03013,map04144,map05164
KEGG Module M00427
Hectar predicted targeting category other localisation
EggNOG free text desc. lipid binding
EggNOG OGs KOG2056@1,KOG2056@2759
Ec32 ortholog description ENTH/VHS
Ec32 ortholog Ec-04_003610.1
COG Functional cat. T
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko00001,ko00002,ko03019,ko03036,ko04131
Exons 4
Model size 1419
Cds size 1419
Stop 1
Start 0
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815811.8270154-CDS-L-elsbetiae_contig1957:17454..17577 1622815811.8270154-CDS-L-elsbetiae_contig1957:17454..17577 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 17455..17577 +
1691683118.4194832-CDS-L-elsbetiae_contig1957:17454..17577 1691683118.4194832-CDS-L-elsbetiae_contig1957:17454..17577 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 17455..17577 +
1622815811.8393512-CDS-L-elsbetiae_contig1957:17969..18440 1622815811.8393512-CDS-L-elsbetiae_contig1957:17969..18440 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 17970..18440 +
1691683118.4312654-CDS-L-elsbetiae_contig1957:17969..18440 1691683118.4312654-CDS-L-elsbetiae_contig1957:17969..18440 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 17970..18440 +
1622815811.85153-CDS-L-elsbetiae_contig1957:19170..19518 1622815811.85153-CDS-L-elsbetiae_contig1957:19170..19518 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 19171..19518 +
1691683118.4417214-CDS-L-elsbetiae_contig1957:19170..19518 1691683118.4417214-CDS-L-elsbetiae_contig1957:19170..19518 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 19171..19518 +
1622815811.8612666-CDS-L-elsbetiae_contig1957:20001..20478 1622815811.8612666-CDS-L-elsbetiae_contig1957:20001..20478 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 20002..20478 +
1691683118.4515078-CDS-L-elsbetiae_contig1957:20001..20478 1691683118.4515078-CDS-L-elsbetiae_contig1957:20001..20478 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1957 20002..20478 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1957.5829.1
>prot_L-elsbetiae_contig1957.5829.1 ID=prot_L-elsbetiae_contig1957.5829.1|Name=mRNA_L-elsbetiae_contig1957.5829.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=473bp
LLFGSRSGTTAKGKYSDTAVEEPSYRSKAAEPEKEKEASSKPKRDRKKSS GGPKLAIKIKDKGGGGGGGGGGGGVVVAKPVAAAAAAVPDLLGGDLLSSD PAPAPASTAAAGGGFGDLFAAAPIAATNGGGGFDGFDPRGGSSAAAPAAA AAVPTPVAAPPAGGGLFGQEFSGFSAAPVAAPAPAAVPAAQPFGTGGAAF ADPFVAAPTPLATATSAMSGGGGGFAGTNGNGAMHARTGSNGEDFSDFQG SGSGSGSGSGAAAAAGAATTTGGGGGGGGSSGGAAANGGVTNPKWRDVSS LVDLGGLSSNTEKKVAQQKVVEQTFQSNNNSFAGLDGFKKPQPQGMGMNR PLSGMTGLSGGGGGGGGGMMGGGGMMGAQQPMPQQQMQGGWMGGGQQGMG AAGAGTAGWGQQPGQQPGQQQQQQQQGFGMGGMQGGAAATGMGAMQQSGA GMAGSKPAGGAAGGTTMPGGFF* back to top mRNA from alignment at L-elsbetiae_contig1957:17455..20478+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1957.5829.1 ID=mRNA_L-elsbetiae_contig1957.5829.1|Name=mRNA_L-elsbetiae_contig1957.5829.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3024bp|location=Sequence derived from alignment at L-elsbetiae_contig1957:17455..20478+ (Laminarionema elsbetiae ELsaHSoW15)CTTCTTTTTGGGTCTCGCAGCGGGACGACTGCGAAGGGGAAGTACTCAGA
CACGGCGGTGGAGGAACCGAGCTACAGAAGCAAGGCGGCTGAGCCCGAAA
AAGAGAAAGAGGCGTCTTCCAAG GTGAGAAGAAAGAGGCGGGAAAAAAAA
CATTGTTGCAGTAAAATATATGTAACGGGGGAGACTAAAGTGCGTGTTCA
CAGCGTGTTTCCGCTCTGAGAACACCGATTTTTAGCGGTTTTGGAGGTTA
TCATACATGGGATGCTAGAGTCTTTTACGACTAGAGACATGCATTCGAGT
GTGGCCCGCATATGGCTTTCCTTAGCGTAGAAAATACAGTATTCCAGCGG
TTCGAAGGTCGTATTATGCTGTCGCTTTTTGATAGGTGGACTAGTATGTA
AGGGGTGTTTGCTGCTGCAAAGGTGCGGCGAAAGAGGACGTCCCGTAACC
CTCCGCCCCCCCCCCCCTCCCCGTCTAATTGCTGTTTTCGGCCCCCTCTC
CTCTCCCCGCGAAAGCCCAAGCGTGACCGCAAGAAATCTTCCGGCGGTCC
GAAGCTGGCCATCAAGATTAAGGATAAGGGTGGTGGCGGCGGCGGCGGCG
GCGGAGGAGGAGGAGTAGTCGTCGCTAAGCCGGTCGCCGCTGCCGCTGCC
GCCGTACCAGATCTCCTCGGCGGCGATCTCCTGTCGTCCGATCCCGCTCC
CGCTCCAGCCTCGACCGCCGCCGCCGGCGGTGGGTTCGGAGACTTGTTTG
CTGCCGCGCCTATCGCCGCCACCAACGGCGGCGGAGGGTTCGATGGTTTT
GATCCCCGCGGCGGGTCTTCTGCGGCTGCGCCGGCGGCGGCGGCGGCGGT
CCCCACGCCCGTGGCGGCACCGCCTGCTGGGGGGGGCTTGTTTGGGCAGG
AGTTTTCGGGGTTTTCGGCGGCACCTGTGGCGGCGCCGGCGCCGGCGGCA
GTGCCGGCGGCACAACCGTTTGGAACGGGCGGAGCG GTGAGCCTCGTTGC
GGTCGGGCGGGTGTTGGAAATACATATTCGTTCAACCCTCTCGGAGAGCA
CATTACTACTGTCTCTCTTCCTCTCTCCTTCTCTTACACACAACACACGC
ACACACACACTCGCTCACTCTCCTTGTTGCGATATTGGGCGTATGGTTTC
TTCTCGTGCTGTCTAAGCGCAAGCGTGCTCTGTGTTTCATATCAACCCGA
TTTGTGTTTTTATGACAATCGGAGAATCAGCTCGTTTTGCTGGGGAGATT
CAGCAAAAATCTCCGGCCGGCTCGAGACTGAAAGTTGAATGCTGTGGCTG
GTTGCTGCTGCTGGGTTGCCCTTGGAGCTGCTACGACCCCCGCCACCGCC
TTCAATCGCGCCTCTTTGTCGCCTACGGGGGCGGACATTTTGCCCTCACC
CGTACGTACCCCACCATTTCGCAAGATGCCGCACGCGATGCGACAACTTC
TCGTGAGTGTGCTTGTTCTGTGCACTCACTCACTCTTCCTCCGTCGTCGA
GTCACGAGCCTCACCATCCCCTTCCGATGGTAATGAGGAAGCACGTTTTG
CTCTGCGACGTCAGGATGCGCCCCCGGTAGAGCAGAAATTACACACACAC
ACACACATGTCCGTCAACTCGTGCCGCCCTGCCTCACGGAGCCCCCTCTC
CCGGGCGACCCCCCGGCCCCGGTCCTGCCCTGCGTACACATTTGCATATT
TTTTCTTCTTCTCCAGGCGTTCGCAGACCCTTTCGTGGCTGCGCCCACCC
CGCTGGCGACGGCCACCTCGGCCATGAGCGGCGGCGGCGGCGGGTTCGCG
GGCACCAACGGCAACGGAGCGATGCACGCAAGGACCGGCTCCAACGGCGA
AGACTTCAGCGATTTCCAGGGCAGCGGCAGCGGCAGCGGCAGCGGCAGCG
GTGCTGCCGCCGCCGCAGGCGCTGCCACCACCACCGGCGGCGGCGGCGGC
GGCGGCGGCAGCAGCGGCGGGGCCGCGGCGAACGGCGGCGTGACCAACCC
CAAGTGGAGGGACGTGTCGTCTCTCGTGGACCTAGGAGGCCTAAGCAGCA
ACACGGAGAAGAAG GTTGGTGCTTTGTCTGCCTGCTGATGTGATTGCTGT
TTTTTTTTTTTACGTTTGTGCCTGTTGTTGGTTTTGGTGATTGATTGGTT
TTGGTGACGTAGCATGCGGGGTACGGAGTGGGATGGACTGGTAGAAGGCA
GGGTAAGAACGGCATGGTTTGCCGGAGACGGTCAAGTCGGAAGATGGGAG
ATTGAGATGGAGATATCTAAGGAGAGGAAAAAGGAGGCTGTGCTGGGTTT
TTTTCAGAGAGCTTGACCCGGTCTGCTCATTTTTTCACGTGTGTCTCTCC
TGGCATCGCTACTAGGACATGGTGGAGCACTGAATGCCATGGCAGATAGC
AACTTACTCGACTCGCCCCCTTGTGCGGCTTGGGCGCGTGTGCGAACATG
AAGACTGGATAGACTTGAGACATCGAAGAAAAACAGTGACACAAACAATC
GACCCGTCGAAACCGCCGCGGCACGCACTTTTATAAAAAAAACACAGGTT
GCGCAGCAGAAGGTCGTTGAGCAAACGTTCCAGTCGAACAACAACTCCTT
CGCGGGTCTGGACGGGTTCAAGAAGCCCCAGCCTCAGGGGATGGGGATGA
ACCGTCCCCTGTCTGGCATGACGGGATTGTCGGGCGGTGGCGGCGGCGGT
GGAGGAGGAATGATGGGTGGGGGGGGGATGATGGGCGCCCAGCAGCCGAT
GCCGCAGCAGCAGATGCAGGGAGGCTGGATGGGAGGTGGGCAGCAAGGCA
TGGGCGCCGCAGGAGCAGGGACGGCGGGCTGGGGGCAACAGCCTGGCCAG
CAGCCCGGCCAGCAGCAGCAGCAGCAGCAGCAAGGCTTCGGAATGGGAGG
CATGCAAGGAGGCGCCGCCGCCACGGGCATGGGGGCGATGCAGCAGAGCG
GGGCTGGGATGGCGGGGAGCAAGCCGGCAGGCGGAGCAGCAGGGGGTACG
ACTATGCCGGGGGGCTTCTTCTGA back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1957:17455..20478+
>mRNA_L-elsbetiae_contig1957.5829.1 ID=mRNA_L-elsbetiae_contig1957.5829.1|Name=mRNA_L-elsbetiae_contig1957.5829.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2838bp|location=Sequence derived from alignment at L-elsbetiae_contig1957:17455..20478+ (Laminarionema elsbetiae ELsaHSoW15) CTTCTTTTTGGGTCTCGCAGCGGGACGACTGCGAAGGGGAAGTACTCAGA CACGGCGGTGGAGGAACCGAGCTACAGAAGCAAGGCGGCTGAGCCCGAAA AAGAGAAAGAGGCGTCTTCCAAGCTTCTTTTTGGGTCTCGCAGCGGGACG ACTGCGAAGGGGAAGTACTCAGACACGGCGGTGGAGGAACCGAGCTACAG AAGCAAGGCGGCTGAGCCCGAAAAAGAGAAAGAGGCGTCTTCCAAGCCCA AGCGTGACCGCAAGAAATCTTCCGGCGGTCCGAAGCTGGCCATCAAGATT AAGGATAAGGGTGGTGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGTAGT CGTCGCTAAGCCGGTCGCCGCTGCCGCTGCCGCCGTACCAGATCTCCTCG GCGGCGATCTCCTGTCGTCCGATCCCGCTCCCGCTCCAGCCTCGACCGCC GCCGCCGGCGGTGGGTTCGGAGACTTGTTTGCTGCCGCGCCTATCGCCGC CACCAACGGCGGCGGAGGGTTCGATGGTTTTGATCCCCGCGGCGGGTCTT CTGCGGCTGCGCCGGCGGCGGCGGCGGCGGTCCCCACGCCCGTGGCGGCA CCGCCTGCTGGGGGGGGCTTGTTTGGGCAGGAGTTTTCGGGGTTTTCGGC GGCACCTGTGGCGGCGCCGGCGCCGGCGGCAGTGCCGGCGGCACAACCGT TTGGAACGGGCGGAGCGCCCAAGCGTGACCGCAAGAAATCTTCCGGCGGT CCGAAGCTGGCCATCAAGATTAAGGATAAGGGTGGTGGCGGCGGCGGCGG CGGCGGAGGAGGAGGAGTAGTCGTCGCTAAGCCGGTCGCCGCTGCCGCTG CCGCCGTACCAGATCTCCTCGGCGGCGATCTCCTGTCGTCCGATCCCGCT CCCGCTCCAGCCTCGACCGCCGCCGCCGGCGGTGGGTTCGGAGACTTGTT TGCTGCCGCGCCTATCGCCGCCACCAACGGCGGCGGAGGGTTCGATGGTT TTGATCCCCGCGGCGGGTCTTCTGCGGCTGCGCCGGCGGCGGCGGCGGCG GTCCCCACGCCCGTGGCGGCACCGCCTGCTGGGGGGGGCTTGTTTGGGCA GGAGTTTTCGGGGTTTTCGGCGGCACCTGTGGCGGCGCCGGCGCCGGCGG CAGTGCCGGCGGCACAACCGTTTGGAACGGGCGGAGCGGCGTTCGCAGAC CCTTTCGTGGCTGCGCCCACCCCGCTGGCGACGGCCACCTCGGCCATGAG CGGCGGCGGCGGCGGGTTCGCGGGCACCAACGGCAACGGAGCGATGCACG CAAGGACCGGCTCCAACGGCGAAGACTTCAGCGATTTCCAGGGCAGCGGC AGCGGCAGCGGCAGCGGCAGCGGTGCTGCCGCCGCCGCAGGCGCTGCCAC CACCACCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGCGGCGGGGCCGCGG CGAACGGCGGCGTGACCAACCCCAAGTGGAGGGACGTGTCGTCTCTCGTG GACCTAGGAGGCCTAAGCAGCAACACGGAGAAGAAGGCGTTCGCAGACCC TTTCGTGGCTGCGCCCACCCCGCTGGCGACGGCCACCTCGGCCATGAGCG GCGGCGGCGGCGGGTTCGCGGGCACCAACGGCAACGGAGCGATGCACGCA AGGACCGGCTCCAACGGCGAAGACTTCAGCGATTTCCAGGGCAGCGGCAG CGGCAGCGGCAGCGGCAGCGGTGCTGCCGCCGCCGCAGGCGCTGCCACCA CCACCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGCGGCGGGGCCGCGGCG AACGGCGGCGTGACCAACCCCAAGTGGAGGGACGTGTCGTCTCTCGTGGA CCTAGGAGGCCTAAGCAGCAACACGGAGAAGAAGGTTGCGCAGCAGAAGG TCGTTGAGCAAACGTTCCAGTCGAACAACAACTCCTTCGCGGGTCTGGAC GGGTTCAAGAAGCCCCAGCCTCAGGGGATGGGGATGAACCGTCCCCTGTC TGGCATGACGGGATTGTCGGGCGGTGGCGGCGGCGGTGGAGGAGGAATGA TGGGTGGGGGGGGGATGATGGGCGCCCAGCAGCCGATGCCGCAGCAGCAG ATGCAGGGAGGCTGGATGGGAGGTGGGCAGCAAGGCATGGGCGCCGCAGG AGCAGGGACGGCGGGCTGGGGGCAACAGCCTGGCCAGCAGCCCGGCCAGC AGCAGCAGCAGCAGCAGCAAGGCTTCGGAATGGGAGGCATGCAAGGAGGC GCCGCCGCCACGGGCATGGGGGCGATGCAGCAGAGCGGGGCTGGGATGGC GGGGAGCAAGCCGGCAGGCGGAGCAGCAGGGGGTACGACTATGCCGGGGG GCTTCTTCTGAGTTGCGCAGCAGAAGGTCGTTGAGCAAACGTTCCAGTCG AACAACAACTCCTTCGCGGGTCTGGACGGGTTCAAGAAGCCCCAGCCTCA GGGGATGGGGATGAACCGTCCCCTGTCTGGCATGACGGGATTGTCGGGCG GTGGCGGCGGCGGTGGAGGAGGAATGATGGGTGGGGGGGGGATGATGGGC GCCCAGCAGCCGATGCCGCAGCAGCAGATGCAGGGAGGCTGGATGGGAGG TGGGCAGCAAGGCATGGGCGCCGCAGGAGCAGGGACGGCGGGCTGGGGGC AACAGCCTGGCCAGCAGCCCGGCCAGCAGCAGCAGCAGCAGCAGCAAGGC TTCGGAATGGGAGGCATGCAAGGAGGCGCCGCCGCCACGGGCATGGGGGC GATGCAGCAGAGCGGGGCTGGGATGGCGGGGAGCAAGCCGGCAGGCGGAG CAGCAGGGGGTACGACTATGCCGGGGGGCTTCTTCTGA back to top