prot_L-elsbetiae_contig1951.5804.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1951.5804.1
Unique Nameprot_L-elsbetiae_contig1951.5804.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length217
Homology
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: D8LKW0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW0_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 2.790e-99
Identity = 165/222 (74.32%), Postives = 180/222 (81.08%), Query Frame = 0
Query:    3 SAGAASNRKVAVQSEHLLSRNVQAGRVVAFAGGATGALLVSQEFG----ERRS-QHGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKLRAAARQRQPIHSICHTADDLLLCATMGGVWAWGGGTKSAGDGSGSGVEQ--AEKLQIQ 217
            S GAA    VAV+ E LLSR+V +GRV AFAGGA GAL+VSQE G     R S +HG+TKFSLADLRH+K+IHLH EQ+RDVKFS +GG+V Y LST FDKTLKVCDLRTDSVVV Y LEG+GWSCQWS+T P QMFCGVVDGTR SAVQLFDLRSTAGAV KLRAAA QRQPIHSICHTADD+L CATMGGVWAWGGGTK  G       E+  AEKLQIQ
Sbjct:  264 SEGAAVGSTVAVRFEQLLSRDVLSGRVAAFAGGAAGALVVSQELGIAGGSRGSLRHGVTKFSLADLRHNKSIHLHREQVRDVKFSADGGSVGYILSTSFDKTLKVCDLRTDSVVVQYELEGSGWSCQWSSTAPTQMFCGVVDGTRTSAVQLFDLRSTAGAVRKLRAAASQRQPIHSICHTADDVLCCATMGGVWAWGGGTKEGGVSEAWDREEQAAEKLQIQ 485          
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: A0A6H5JB60_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB60_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 4.870e-99
Identity = 165/222 (74.32%), Postives = 181/222 (81.53%), Query Frame = 0
Query:    3 SAGAASNRKVAVQSEHLLSRNVQAGRVVAFAGGATGALLVSQEFG----ERRS-QHGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKLRAAARQRQPIHSICHTADDLLLCATMGGVWAWGGGTKSAGDGSGSGVEQ--AEKLQIQ 217
            S GAA+   VAV+ E LLSR+V +GRV AFAGGA GAL+VSQE G     R S +HG+TKFSLADLRH+K+IHLH EQ+RDVKFS +GG+V Y LST FDKTLKVCDLRTDSVVV Y LEG+GWSCQWS+T P QMFCGVVDGTR SAVQLFDLRSTAGAV KLRAAA QRQPIHSICHTADD+L CATMGGVWAWGGGTK  G       E+  AEKLQIQ
Sbjct:  339 SEGAAAGSTVAVRFEQLLSRDVLSGRVAAFAGGAAGALVVSQELGIAGGSRGSLRHGVTKFSLADLRHNKSIHLHREQLRDVKFSADGGSVGYILSTSFDKTLKVCDLRTDSVVVQYELEGSGWSCQWSSTTPTQMFCGVVDGTRTSAVQLFDLRSTAGAVRKLRAAASQRQPIHSICHTADDVLCCATMGGVWAWGGGTKEGGGSEAWDPEELAAEKLQIQ 560          
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: A0A6B2L3U3_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L3U3_9EUKA)

HSP 1 Score: 75.9 bits (185), Expect = 1.560e-12
Identity = 50/167 (29.94%), Postives = 78/167 (46.71%), Query Frame = 0
Query:   38 GALLVSQEFGERRSQHGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKLRAAARQRQPIHSICHT--------------ADDLLLCATMGGV 190
            G+LL+    G   + +GI K S  D  H   I+ H + I+D+K     G+    LS  FDKT+K+ +  + S++++Y      WSC W    P Q+F G   G     + ++D+R T   +   +    +R+PIHS+ H                  +LL ATM GV
Sbjct:   82 GSLLIDFSDG---NTYGIKKISSLDTNHLITIYTHNQPIKDLKVCPTKGDYR-VLSVSFDKTVKMTETNSKSIILNYKTNSPLWSCSWHPCEPFQIFSGSATGE----IHVYDIRQTKSHLKLFQNP--ERKPIHSLLHLPVPSLSPSQSPHLEGSHVLLNATMNGV 238          
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: A0A0D2U0B0_CAPO3 (RFWD3 protein n=3 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U0B0_CAPO3)

HSP 1 Score: 75.9 bits (185), Expect = 2.480e-12
Identity = 46/156 (29.49%), Postives = 76/156 (48.72%), Query Frame = 0
Query:   53 HGITKFSLADLR--HHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKLRAAARQRQPIH---------------SICHTADDLLLCATMGGVW 191
            HGI K S  D+   H + + +H + IRD KFS+   ++  T S   DKT+K+  L+T+SVV++Y + G  W+C W+      ++ G+  G+ +    +FD+R+T G V+    +      +H               S+ H     LL  T+ G W
Sbjct:  716 HGILKLSTIDMTFSHSEFVGIHNDTIRDFKFSERPNSLVLTASA--DKTVKLSSLKTNSVVLTYQVNGPAWACAWNTDVEHILYAGLQSGSTL----VFDIRNTRGPVSSFSPSKVPIISLHYSSAKNGLTHTTEGASVDHALPSSLLIGTLRGPW 865          
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: UPI001CDCE5FA (E3 ubiquitin-protein ligase RFWD3-like n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=UPI001CDCE5FA)

HSP 1 Score: 69.3 bits (168), Expect = 3.880e-10
Identity = 49/141 (34.75%), Postives = 70/141 (49.65%), Query Frame = 0
Query:   37 TGALLVSQEFGERRSQ---HGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKLRAAARQRQPIHSI 174
            TG L +SQ+   R S    +GI  F +  +     I +H + IRD+ F     + S  LS GFDKT K+ D+ T SVV ++ +    WSC W+  +P     G   G  V     FD+R T+GAV+ L      R P+ S+
Sbjct:  325 TGHLAISQKTSTRFSMFAGYGIKLFDVNLMNSVTFIPVHQDAIRDLSF--HSSHQSLVLSVGFDKTAKLVDVNTKSVVHNFPVGLKAWSCCWAGDDPNNFLVGCEQGKIV----YFDIRQTSGAVDTLSNTG-VRSPVISL 458          
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: A0A834Y2P2_9HYME (Uncharacterized protein n=2 Tax=Aphidius gifuensis TaxID=684658 RepID=A0A834Y2P2_9HYME)

HSP 1 Score: 69.3 bits (168), Expect = 4.460e-10
Identity = 49/141 (34.75%), Postives = 70/141 (49.65%), Query Frame = 0
Query:   37 TGALLVSQEFGERRSQ---HGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKLRAAARQRQPIHSI 174
            TG L +SQ+   R S    +GI  F +  +     I +H + IRD+ F     + S  LS GFDKT K+ D+ T SVV ++ +    WSC W+  +P     G   G  V     FD+R T+GAV+ L      R P+ S+
Sbjct:  325 TGHLAISQKTSTRFSMFAGYGIKLFDVNLMNSVTFIPVHQDAIRDLSF--HSSHQSLVLSVGFDKTAKLVDVNTKSVVHNFPVGLKAWSCCWAGDDPNNFLVGCEQGKIV----YFDIRQTSGAVDTLSNTG-VRSPVISL 458          
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: A0A4Y2K0F7_ARAVE (E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2K0F7_ARAVE)

HSP 1 Score: 67.4 bits (163), Expect = 1.670e-9
Identity = 41/125 (32.80%), Postives = 67/125 (53.60%), Query Frame = 0
Query:   38 GALLVSQ-EFGERRSQHGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKL 161
            G +L+SQ    E    +G  K S  D++  + + +H + IRD+ F    G V   L+   DK++K+ ++ T+SVV +Y L+ + WSC W    P   + G+  G     V LFD+R T+  V++L
Sbjct:  223 GMILISQPSINELFPGYGFRKISTLDMKPSEFVLVHQKPIRDMAFHCHDGLV---LTASLDKSVKITNVLTNSVVHTYPLDSDVWSCAWDLDEPTYFYAGLKTGD----VYLFDIRMTSRYVHEL 340          
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: A0A2L2YH99_PARTP (E3 ubiquitin-protein ligase RFWD3 (Fragment) n=3 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YH99_PARTP)

HSP 1 Score: 66.6 bits (161), Expect = 3.120e-9
Identity = 40/125 (32.00%), Postives = 70/125 (56.00%), Query Frame = 0
Query:   38 GALLVSQEFG-ERRSQHGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKL 161
            G +LVSQ    +    HG  K +  +++  + + +H + I+D+ F  + G V   L+   DK +K+  + T+SVV +Y L+ + WSC W + +P   + G+ +G     V LFD+R T+ +VN+L
Sbjct:  258 GLILVSQPTNNDMFPGHGFRKIAAQEMKLAEFVLVHQKPIKDMAFHSQDGLV---LTASLDKNVKITYVLTNSVVQTYSLDCDAWSCAWDSDDPMYFYGGLRNG----GVLLFDIRVTSRSVNEL 375          
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: A0A087T1N0_STEMI (E3 ubiquitin-protein ligase RFWD3 (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087T1N0_STEMI)

HSP 1 Score: 65.9 bits (159), Expect = 5.670e-9
Identity = 41/125 (32.80%), Postives = 68/125 (54.40%), Query Frame = 0
Query:   38 GALLVSQ-EFGERRSQHGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKL 161
            G +LVSQ    E     G  K S  D++  + + +H + IRD+ F    G V   L+   DK++++ ++ T++VV +Y ++ + WSC W A +P   F G+  G     V LFD+R T+  V++L
Sbjct:  262 GIILVSQPSTNELFPGFGFRKLSTMDMKPSEFVWVHQKPIRDMAFHVHDGLV---LTGSLDKSVRITNILTNTVVQTYVVDSDVWSCAWDADDPVYFFAGLKSG----GVYLFDIRVTSRYVHEL 379          
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: UPI0015B0B800 (E3 ubiquitin-protein ligase RFWD3-like isoform X1 n=3 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015B0B800)

HSP 1 Score: 65.9 bits (159), Expect = 5.750e-9
Identity = 41/125 (32.80%), Postives = 68/125 (54.40%), Query Frame = 0
Query:   38 GALLVSQ-EFGERRSQHGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKL 161
            G +LVSQ    E     G  K S  D++  + + +H + IRD+ F    G V   L+   DK++++ ++ T++VV +Y ++ + WSC W A +P   F G+  G     V LFD+R T+  V++L
Sbjct:  262 GIILVSQPSTNELFPGFGFRKLSTMDMKPSEFVWVHQKPIRDMAFHVHDGLV---LTGSLDKSVRITNILTNTVVQTYVVDSDVWSCAWDADDPVYFFAGLKSG----GVYLFDIRVTSRYVHEL 379          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D8LKW0_ECTSI2.790e-9974.32RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JB60_9PHAE4.870e-9974.32RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6B2L3U3_9EUKA1.560e-1229.94Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A0D2U0B0_CAPO32.480e-1229.49RFWD3 protein n=3 Tax=Capsaspora owczarzaki (strai... [more]
UPI001CDCE5FA3.880e-1034.75E3 ubiquitin-protein ligase RFWD3-like n=1 Tax=Aph... [more]
A0A834Y2P2_9HYME4.460e-1034.75Uncharacterized protein n=2 Tax=Aphidius gifuensis... [more]
A0A4Y2K0F7_ARAVE1.670e-932.80E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Araneus ... [more]
A0A2L2YH99_PARTP3.120e-932.00E3 ubiquitin-protein ligase RFWD3 (Fragment) n=3 T... [more]
A0A087T1N0_STEMI5.670e-932.80E3 ubiquitin-protein ligase RFWD3 (Fragment) n=1 T... [more]
UPI0015B0B8005.750e-932.80E3 ubiquitin-protein ligase RFWD3-like isoform X1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 15..210
e-value: 2.4E-10
score: 41.8
IPR037381E3 ubiquitin-protein ligase RFWD3PANTHERPTHR16047RFWD3 PROTEINcoord: 16..195
NoneNo IPR availablePANTHERPTHR16047:SF7E3 UBIQUITIN-PROTEIN LIGASE RFWD3coord: 16..195
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 55..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1951contigL-elsbetiae_contig1951:14433..17087 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1951.5804.1mRNA_L-elsbetiae_contig1951.5804.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1951 14433..17087 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1951.5804.1 ID=prot_L-elsbetiae_contig1951.5804.1|Name=mRNA_L-elsbetiae_contig1951.5804.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=217bp
MESAGAASNRKVAVQSEHLLSRNVQAGRVVAFAGGATGALLVSQEFGERR
SQHGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTL
KVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFD
LRSTAGAVNKLRAAARQRQPIHSICHTADDLLLCATMGGVWAWGGGTKSA
GDGSGSGVEQAEKLQIQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037381RFWD3
IPR036322WD40_repeat_dom_sf