mRNA_L-elsbetiae_contig1951.5804.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: D8LKW0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW0_ECTSI) HSP 1 Score: 310 bits (795), Expect = 2.790e-99 Identity = 165/222 (74.32%), Postives = 180/222 (81.08%), Query Frame = 1 Query: 7 SAGAASNRKVAVQSEHLLSRNVQAGRVVAFAGGATGALLVSQEFG----ERRS-QHGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKLRAAARQRQPIHSICHTADDLLLCATMGGVWAWGGGTKSAGDGSGSGVEQ--AEKLQIQ 651 S GAA VAV+ E LLSR+V +GRV AFAGGA GAL+VSQE G R S +HG+TKFSLADLRH+K+IHLH EQ+RDVKFS +GG+V Y LST FDKTLKVCDLRTDSVVV Y LEG+GWSCQWS+T P QMFCGVVDGTR SAVQLFDLRSTAGAV KLRAAA QRQPIHSICHTADD+L CATMGGVWAWGGGTK G E+ AEKLQIQ Sbjct: 264 SEGAAVGSTVAVRFEQLLSRDVLSGRVAAFAGGAAGALVVSQELGIAGGSRGSLRHGVTKFSLADLRHNKSIHLHREQVRDVKFSADGGSVGYILSTSFDKTLKVCDLRTDSVVVQYELEGSGWSCQWSSTAPTQMFCGVVDGTRTSAVQLFDLRSTAGAVRKLRAAASQRQPIHSICHTADDVLCCATMGGVWAWGGGTKEGGVSEAWDREEQAAEKLQIQ 485
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: A0A6H5JB60_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB60_9PHAE) HSP 1 Score: 313 bits (802), Expect = 4.870e-99 Identity = 165/222 (74.32%), Postives = 181/222 (81.53%), Query Frame = 1 Query: 7 SAGAASNRKVAVQSEHLLSRNVQAGRVVAFAGGATGALLVSQEFG----ERRS-QHGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKLRAAARQRQPIHSICHTADDLLLCATMGGVWAWGGGTKSAGDGSGSGVEQ--AEKLQIQ 651 S GAA+ VAV+ E LLSR+V +GRV AFAGGA GAL+VSQE G R S +HG+TKFSLADLRH+K+IHLH EQ+RDVKFS +GG+V Y LST FDKTLKVCDLRTDSVVV Y LEG+GWSCQWS+T P QMFCGVVDGTR SAVQLFDLRSTAGAV KLRAAA QRQPIHSICHTADD+L CATMGGVWAWGGGTK G E+ AEKLQIQ Sbjct: 339 SEGAAAGSTVAVRFEQLLSRDVLSGRVAAFAGGAAGALVVSQELGIAGGSRGSLRHGVTKFSLADLRHNKSIHLHREQLRDVKFSADGGSVGYILSTSFDKTLKVCDLRTDSVVVQYELEGSGWSCQWSSTTPTQMFCGVVDGTRTSAVQLFDLRSTAGAVRKLRAAASQRQPIHSICHTADDVLCCATMGGVWAWGGGTKEGGGSEAWDPEELAAEKLQIQ 560
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: A0A6B2L3U3_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L3U3_9EUKA) HSP 1 Score: 75.9 bits (185), Expect = 1.560e-12 Identity = 50/167 (29.94%), Postives = 78/167 (46.71%), Query Frame = 1 Query: 112 GALLVSQEFGERRSQHGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKLRAAARQRQPIHSICHT--------------ADDLLLCATMGGV 570 G+LL+ G + +GI K S D H I+ H + I+D+K G+ LS FDKT+K+ + + S++++Y WSC W P Q+F G G + ++D+R T + + +R+PIHS+ H +LL ATM GV Sbjct: 82 GSLLIDFSDG---NTYGIKKISSLDTNHLITIYTHNQPIKDLKVCPTKGDYR-VLSVSFDKTVKMTETNSKSIILNYKTNSPLWSCSWHPCEPFQIFSGSATGE----IHVYDIRQTKSHLKLFQNP--ERKPIHSLLHLPVPSLSPSQSPHLEGSHVLLNATMNGV 238
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: A0A0D2U0B0_CAPO3 (RFWD3 protein n=3 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U0B0_CAPO3) HSP 1 Score: 75.9 bits (185), Expect = 2.480e-12 Identity = 46/156 (29.49%), Postives = 76/156 (48.72%), Query Frame = 1 Query: 157 HGITKFSLADLR--HHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKLRAAARQRQPIH---------------SICHTADDLLLCATMGGVW 573 HGI K S D+ H + + +H + IRD KFS+ ++ T S DKT+K+ L+T+SVV++Y + G W+C W+ ++ G+ G+ + +FD+R+T G V+ + +H S+ H LL T+ G W Sbjct: 716 HGILKLSTIDMTFSHSEFVGIHNDTIRDFKFSERPNSLVLTASA--DKTVKLSSLKTNSVVLTYQVNGPAWACAWNTDVEHILYAGLQSGSTL----VFDIRNTRGPVSSFSPSKVPIISLHYSSAKNGLTHTTEGASVDHALPSSLLIGTLRGPW 865
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: UPI001CDCE5FA (E3 ubiquitin-protein ligase RFWD3-like n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=UPI001CDCE5FA) HSP 1 Score: 69.3 bits (168), Expect = 3.880e-10 Identity = 49/141 (34.75%), Postives = 70/141 (49.65%), Query Frame = 1 Query: 109 TGALLVSQEFGERRSQ---HGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKLRAAARQRQPIHSI 522 TG L +SQ+ R S +GI F + + I +H + IRD+ F + S LS GFDKT K+ D+ T SVV ++ + WSC W+ +P G G V FD+R T+GAV+ L R P+ S+ Sbjct: 325 TGHLAISQKTSTRFSMFAGYGIKLFDVNLMNSVTFIPVHQDAIRDLSF--HSSHQSLVLSVGFDKTAKLVDVNTKSVVHNFPVGLKAWSCCWAGDDPNNFLVGCEQGKIV----YFDIRQTSGAVDTLSNTG-VRSPVISL 458
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: A0A834Y2P2_9HYME (Uncharacterized protein n=2 Tax=Aphidius gifuensis TaxID=684658 RepID=A0A834Y2P2_9HYME) HSP 1 Score: 69.3 bits (168), Expect = 4.460e-10 Identity = 49/141 (34.75%), Postives = 70/141 (49.65%), Query Frame = 1 Query: 109 TGALLVSQEFGERRSQ---HGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKLRAAARQRQPIHSI 522 TG L +SQ+ R S +GI F + + I +H + IRD+ F + S LS GFDKT K+ D+ T SVV ++ + WSC W+ +P G G V FD+R T+GAV+ L R P+ S+ Sbjct: 325 TGHLAISQKTSTRFSMFAGYGIKLFDVNLMNSVTFIPVHQDAIRDLSF--HSSHQSLVLSVGFDKTAKLVDVNTKSVVHNFPVGLKAWSCCWAGDDPNNFLVGCEQGKIV----YFDIRQTSGAVDTLSNTG-VRSPVISL 458
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: A0A4Y2K0F7_ARAVE (E3 ubiquitin-protein ligase RFWD3 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2K0F7_ARAVE) HSP 1 Score: 67.4 bits (163), Expect = 1.670e-9 Identity = 41/125 (32.80%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 112 GALLVSQ-EFGERRSQHGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKL 483 G +L+SQ E +G K S D++ + + +H + IRD+ F G V L+ DK++K+ ++ T+SVV +Y L+ + WSC W P + G+ G V LFD+R T+ V++L Sbjct: 223 GMILISQPSINELFPGYGFRKISTLDMKPSEFVLVHQKPIRDMAFHCHDGLV---LTASLDKSVKITNVLTNSVVHTYPLDSDVWSCAWDLDEPTYFYAGLKTGD----VYLFDIRMTSRYVHEL 340
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: A0A2L2YH99_PARTP (E3 ubiquitin-protein ligase RFWD3 (Fragment) n=3 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YH99_PARTP) HSP 1 Score: 66.6 bits (161), Expect = 3.120e-9 Identity = 40/125 (32.00%), Postives = 70/125 (56.00%), Query Frame = 1 Query: 112 GALLVSQEFG-ERRSQHGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKL 483 G +LVSQ + HG K + +++ + + +H + I+D+ F + G V L+ DK +K+ + T+SVV +Y L+ + WSC W + +P + G+ +G V LFD+R T+ +VN+L Sbjct: 258 GLILVSQPTNNDMFPGHGFRKIAAQEMKLAEFVLVHQKPIKDMAFHSQDGLV---LTASLDKNVKITYVLTNSVVQTYSLDCDAWSCAWDSDDPMYFYGGLRNG----GVLLFDIRVTSRSVNEL 375
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: A0A087T1N0_STEMI (E3 ubiquitin-protein ligase RFWD3 (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087T1N0_STEMI) HSP 1 Score: 65.9 bits (159), Expect = 5.670e-9 Identity = 41/125 (32.80%), Postives = 68/125 (54.40%), Query Frame = 1 Query: 112 GALLVSQ-EFGERRSQHGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKL 483 G +LVSQ E G K S D++ + + +H + IRD+ F G V L+ DK++++ ++ T++VV +Y ++ + WSC W A +P F G+ G V LFD+R T+ V++L Sbjct: 262 GIILVSQPSTNELFPGFGFRKLSTMDMKPSEFVWVHQKPIRDMAFHVHDGLV---LTGSLDKSVRITNILTNTVVQTYVVDSDVWSCAWDADDPVYFFAGLKSG----GVYLFDIRVTSRYVHEL 379
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Match: UPI0015B0B800 (E3 ubiquitin-protein ligase RFWD3-like isoform X1 n=3 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015B0B800) HSP 1 Score: 65.9 bits (159), Expect = 5.750e-9 Identity = 41/125 (32.80%), Postives = 68/125 (54.40%), Query Frame = 1 Query: 112 GALLVSQ-EFGERRSQHGITKFSLADLRHHKNIHLHGEQIRDVKFSDEGGNVSYTLSTGFDKTLKVCDLRTDSVVVSYHLEGNGWSCQWSATNPAQMFCGVVDGTRVSAVQLFDLRSTAGAVNKL 483 G +LVSQ E G K S D++ + + +H + IRD+ F G V L+ DK++++ ++ T++VV +Y ++ + WSC W A +P F G+ G V LFD+R T+ V++L Sbjct: 262 GIILVSQPSTNELFPGFGFRKLSTMDMKPSEFVWVHQKPIRDMAFHVHDGLV---LTGSLDKSVRITNILTNTVVQTYVVDSDVWSCAWDADDPVYFFAGLKSG----GVYLFDIRVTSRYVHEL 379 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1951.5804.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1951.5804.1 >prot_L-elsbetiae_contig1951.5804.1 ID=prot_L-elsbetiae_contig1951.5804.1|Name=mRNA_L-elsbetiae_contig1951.5804.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=217bp MESAGAASNRKVAVQSEHLLSRNVQAGRVVAFAGGATGALLVSQEFGERRback to top mRNA from alignment at L-elsbetiae_contig1951:14433..17087- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1951.5804.1 ID=mRNA_L-elsbetiae_contig1951.5804.1|Name=mRNA_L-elsbetiae_contig1951.5804.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2655bp|location=Sequence derived from alignment at L-elsbetiae_contig1951:14433..17087- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1951:14433..17087- >mRNA_L-elsbetiae_contig1951.5804.1 ID=mRNA_L-elsbetiae_contig1951.5804.1|Name=mRNA_L-elsbetiae_contig1951.5804.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1302bp|location=Sequence derived from alignment at L-elsbetiae_contig1951:14433..17087- (Laminarionema elsbetiae ELsaHSoW15)back to top |