Homology
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match:
D8LUB7_ECTSI (Intraflagellar transport protein 172 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUB7_ECTSI)
HSP 1 Score: 442 bits (1137), Expect = 2.640e-141
Identity = 211/224 (94.20%), Postives = 216/224 (96.43%), Query Frame = 1
Query: 1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 672
MQLRHLNT+ QP GEG D KMSKVMAVAWAPNNRKLAVCTADRVV+LYDENGEKRDRFSTKPAEKGPK YIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQ SPITCMSWPEARPNEVVFGLAEGKVKIGQLKSN+PATLYNVDSFCA+LATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWG+SIVAAGNDGQV
Sbjct: 1 MQLRHLNTIIQPATGEGGDGAKMSKVMAVAWAPNNRKLAVCTADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGLSIVAAGNDGQV 224
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match:
A0A6H5KMU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMU1_9PHAE)
HSP 1 Score: 366 bits (940), Expect = 5.620e-124
Identity = 174/182 (95.60%), Postives = 179/182 (98.35%), Query Frame = 1
Query: 127 ADRVVSLYDENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 672
ADRVV+LYDENGEKRDRFSTKPAEKGPK YIVRDLCFSPDS RLAVAQSDSIVFVYKLGLEWGESKSICNKFPQ SPITCMSWPEARPNEVVFGLAEGKVKIGQLKSN+PATLYNVDSFCA+LATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVP+ALSWG+SIVAAGNDGQV
Sbjct: 2 ADRVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDSARLAVAQSDSIVFVYKLGLEWGESKSICNKFPQPSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLVIHPSVPFALSWGLSIVAAGNDGQV 183
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match:
A0A835YVD3_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVD3_9STRA)
HSP 1 Score: 317 bits (812), Expect = 1.160e-100
Identity = 153/225 (68.00%), Postives = 177/225 (78.67%), Query Frame = 1
Query: 1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNGA-PSHTKLVIHPSVPYALSWGISIVAAGNDGQV 672
MQLRHL T+ P GEG + + KV A+AWAPNNRKLAVCTADRVV+L+DENGEKRD+FSTKPA+KGPK Y+VR + FVYKLG EWGE KSICNKFPQ SP+T ++W +ARPN++VFGLA+GKVKIGQL++NKPATLYN DSF A+LA S DGNGVVSAHADG +YRFLFDD+G PSH +L +HP VPYALSWG SIVAAGND QV
Sbjct: 1 MQLRHLQTVLAPP-GEGGS-LPLQKVTAIAWAPNNRKLAVCTADRVVTLFDENGEKRDKFSTKPADKGPKNYMVRAMXXXXXXXXXXXXXXXXXXFVYKLGAEWGEKKSICNKFPQPSPVTALTWADARPNDIVFGLADGKVKIGQLRTNKPATLYNADSFVAALAASADGNGVVSAHADGAIYRFLFDDSGGGPSHARLAVHPCVPYALSWGRSIVAAGNDCQV 223
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match:
A0A6A4ZTU4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZTU4_9STRA)
HSP 1 Score: 280 bits (717), Expect = 5.640e-91
Identity = 137/240 (57.08%), Postives = 179/240 (74.58%), Query Frame = 1
Query: 1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDE-NGEKRDRFSTKPAEK-------------GPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 675
MQLRHL+T+ PT G M KV A+AW+PNNR+LAV T +RVV ++D GE++D+FSTKPAEK G K Y+V+ L FSPDS++LAVAQSD+IVF+YKLGL+WG+ KSICNKF Q++ +T M WP + PNE+VFGL++GKVK+GQL+SNKPATLY S+ ++L T+ +G ++S+H D ++YRF+FDD NG S TK+ IH VPYALSWG +IVAAGND +VT
Sbjct: 1 MQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKVPPATTAMYLACVGDKNYLVKALAFSPDSSKLAVAQSDNIVFIYKLGLDWGDKKSICNKFLQTASVTSMVWPTSHPNEIVFGLSDGKVKLGQLRSNKPATLYATGSYVSTLCTNVEGTAILSSHYDHSIYRFIFDDVNGGSSQTKIAIHSCVPYALSWGEAIVAAGNDRKVT 233
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match:
A0A1V9ZC42_9STRA (Intraflagellar Transport Protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC42_9STRA)
HSP 1 Score: 300 bits (769), Expect = 2.100e-90
Identity = 142/227 (62.56%), Postives = 181/227 (79.74%), Query Frame = 1
Query: 1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDE-NGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 675
MQLRHL+T+ PT G M KV A+AW+PNNR+LAV T +RVV ++D GE++D+FSTKPAEKG K Y+VR L FSPDS++LAVAQSD+IVF+YKLGLEWG+ KSICNKF Q+S +T M WP A PNE+VFGLA+GKVK+GQL+SNKPATLY+ S+ A++ T+P+G ++S+H D ++YRF+FDD NG + TK+ +H VPYALSWG SIVAAGND +VT
Sbjct: 978 MQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKGDKNYVVRALAFSPDSSKLAVAQSDNIVFIYKLGLEWGDKKSICNKFAQASSVTSMIWPVAHPNEIVFGLADGKVKLGQLRSNKPATLYSTGSYVATMCTNPEGTAILSSHYDQSIYRFIFDDVNGGSTQTKIALHTCVPYALSWGESIVAAGNDRKVT 1197
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match:
A0A813BFQ9_9DINO (IFT172 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BFQ9_9DINO)
HSP 1 Score: 279 bits (713), Expect = 4.300e-89
Identity = 125/204 (61.27%), Postives = 164/204 (80.39%), Query Frame = 1
Query: 67 MSKVMAVAWAPNNRKLAVCTADRVVSLYDENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNG-APSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 675
M KV AV W+PNNR+LA+ T D+VV L+DENGE+RD+FSTKPA+K K Y++ + FSPDS++LAVAQSD+IVFVYKLGLEWG+ K+ICNKF Q+S +T ++WP+A PNEV FGL +GKVKIGQL++NK ATLY DSF S+ +SPDG+ ++S H DG++YRF F + G P+ K +H +VPYALSWG S++AAGND +V+
Sbjct: 1 MCKVTAVCWSPNNRRLAIVTVDKVVHLFDENGERRDKFSTKPADKTNKSYMITGMSFSPDSSKLAVAQSDNIVFVYKLGLEWGDKKTICNKFLQTSSVTALTWPKAHPNEVAFGLQDGKVKIGQLRNNKAATLYTTDSFTVSMCSSPDGHALLSGHLDGSIYRFHFGEGGQGPAQGKFAVHSAVPYALSWGASVLAAGNDRKVS 204
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match:
A0A0P1AMT9_PLAHL (Intraflagellar transport protein 172 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AMT9_PLAHL)
HSP 1 Score: 296 bits (757), Expect = 8.230e-89
Identity = 141/227 (62.11%), Postives = 179/227 (78.85%), Query Frame = 1
Query: 1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYD-ENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 675
MQLRHL +L Q T G M KV A+A++PNNR+LAV T DRVV L+D + GE++D+FSTKPA+KG K YIVR L FSPDS +LAVAQSD+I+FVYK+GLE+G+ KSICNKFPQ+S +T ++WP PNE+VFGLA+GKVKIG L+SNKPATLY S+ + + ++PDG ++SAH DG +YRF+FDD G P+H KLV+H +PYALSWG SIVAAGND +V+
Sbjct: 1 MQLRHLTSLLQATEG-------MCKVTAIAYSPNNRRLAVVTVDRVVHLFDGQTGERKDKFSTKPADKGDKHYIVRALEFSPDSCKLAVAQSDNIIFVYKIGLEFGDKKSICNKFPQTSSVTSLTWPSTHPNEIVFGLADGKVKIGHLRSNKPATLYATGSYVSQVCSNPDGTAILSAHYDGAIYRFIFDDVTGGPTHAKLVVHSCIPYALSWGDSIVAAGNDRRVS 220
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match:
A0A7S0RE83_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RE83_9CHLO)
HSP 1 Score: 277 bits (709), Expect = 3.270e-88
Identity = 135/228 (59.21%), Postives = 170/228 (74.56%), Query Frame = 1
Query: 1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDENGEKRDRFSTKPAE-KGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNV--DSFCASLATSPDGNGVVSAHADGTLYRFLFDDNG-APSHTKLVIHPSVPYALSWGISIVAAGNDGQV 672
MQLRHL PT G +SKV + W+ N+R++AV T DR+V L+DENG+++D+FSTKPA+ G K Y+VR + FSPDS++LA+ QSD+IVFVYKLG EWG+ KSICNKF QSS ITC++WP + +EVVFGLAEGKVK+GQL+SNKPATLY S+ SL +SPDG ++S H DGT+YRF FDD PS++KL HP VPYALSWG SI AG+D +V
Sbjct: 1 MQLRHLKCALPPTEG-------ISKVTTITWSSNSRRMAVVTTDRIVHLFDENGDRKDKFSTKPADPSGAKNYVVRGMAFSPDSSKLAIGQSDNIVFVYKLGTEWGDKKSICNKFHQSSAITCITWPHQQHHEVVFGLAEGKVKVGQLRSNKPATLYAHPDQSYVVSLCSSPDGRAILSGHLDGTIYRFYFDDGVLGPSNSKLTTHPVVPYALSWGESICVAGSDCKV 221
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match:
A0A397EVR2_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EVR2_9STRA)
HSP 1 Score: 290 bits (741), Expect = 4.170e-88
Identity = 137/227 (60.35%), Postives = 179/227 (78.85%), Query Frame = 1
Query: 1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYDE-NGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQVT 675
MQLRHL+T+ PT G M KV A+AW+PNNR+LAV T +RVV ++D GE++D+FSTKPAEKG K Y+V+ L FSPDS++LAVAQSD+IVF+YKLGL+WG+ KSICNKF Q++ +T M WP + PNE+VFGL++GKVK+GQL+SNKPATLY S+ ++L T+ +G ++S+H D ++YRF+FDD NG S TK+ IH VPYALSWG +IVAAGND +VT
Sbjct: 1 MQLRHLSTVLPPTEG-------MCKVTAIAWSPNNRRLAVVTVERVVHMFDAATGERKDKFSTKPAEKGDKNYLVKALAFSPDSSKLAVAQSDNIVFIYKLGLDWGDKKSICNKFLQTASVTSMVWPTSHPNEIVFGLSDGKVKLGQLRSNKPATLYATGSYVSTLCTNVEGTAILSSHYDHSIYRFIFDDVNGGSSQTKIAIHSCVPYALSWGEAIVAAGNDRKVT 220
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Match:
A0A8K1FJC7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJC7_PYTOL)
HSP 1 Score: 293 bits (749), Expect = 9.840e-88
Identity = 137/226 (60.62%), Postives = 180/226 (79.65%), Query Frame = 1
Query: 1 MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLYD-ENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKLGLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSNKPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDD-NGAPSHTKLVIHPSVPYALSWGISIVAAGNDGQV 672
MQLRHL +L T G M KV AVAW+PNN++LAV T DRVV ++D + GE++D+FSTKPA+KG K YIVR+L FSPDS++LAVAQSD+IVF+YK+GL+WG+ KSICNKFPQS+ IT ++WP PNE+VFGLA+GKVKIGQL+SNKPATLY S+ +++ ++ +G ++S H DG+++RF+FDD G P++TK+ +H VPYALSWG SIVAAGND +V
Sbjct: 1 MQLRHLTSLLPATEG-------MCKVTAVAWSPNNKRLAVVTVDRVVHMFDAQTGERKDKFSTKPADKGEKNYIVRELVFSPDSSKLAVAQSDNIVFIYKIGLDWGDKKSICNKFPQSTSITALTWPNTHPNEIVFGLADGKVKIGQLRSNKPATLYASGSYVSTVCSNMEGTAILSGHYDGSIFRFVFDDVTGGPTNTKITVHSCVPYALSWGESIVAAGNDRRV 219
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1949.5792.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.64e-141 / Id = 94.20 Expect = 5.62e-124 / Id = 95.60 Expect = 1.16e-100 / Id = 68.00 Expect = 5.64e-91 / Id = 57.08 Expect = 2.10e-90 / Id = 62.56 Expect = 4.30e-89 / Id = 61.27 Expect = 8.23e-89 / Id = 62.11 Expect = 3.27e-88 / Id = 59.21 Expect = 4.17e-88 / Id = 60.35 Expect = 9.84e-88 / Id = 60.62 Sequence D8LUB7_ECTSI A0A6H5KMU1_9PHAE A0A835YVD3_9STRA A0A6A4ZTU4_9STRA A0A1V9ZC42_9STRA A0A813BFQ9_9DINO A0A0P1AMT9_PLAHL A0A7S0RE83_9CHLO A0A397EVR2_9STRA A0A8K1FJC7_PYTOL
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 441.8
Seed ortholog evalue 1.9e-121
Seed eggNOG ortholog 2880.D8LUB7
Preferred name IFT172
KEGG ko ko:K19676
Hectar predicted targeting category other localisation
GOs GO:0000122,GO:0000226,GO:0001501,GO:0001654,GO:0001655,GO:0001822,GO:0001838,GO:0001841,GO:0001843,GO:0001894,GO:0001895,GO:0001947,GO:0002009,GO:0002119,GO:0002164,GO:0003002,GO:0003007,GO:0003143,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005815,GO:0005856,GO:0005871,GO:0005875,GO:0005929,GO:0005930,GO:0006355,GO:0006357,GO:0006508,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007224,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0008134,GO:0008150,GO:0008152,GO:0008285,GO:0008544,GO:0008589,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009798,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009953,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0010970,GO:0014020,GO:0015630,GO:0016043,GO:0016331,GO:0016485,GO:0019219,GO:0019222,GO:0019538,GO:0021510,GO:0021515,GO:0021517,GO:0021522,GO:0021915,GO:0021953,GO:0022008,GO:0022607,GO:0022611,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030705,GO:0030990,GO:0030992,GO:0031122,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031503,GO:0031514,GO:0031982,GO:0032006,GO:0032501,GO:0032502,GO:0032838,GO:0032991,GO:0035050,GO:0035148,GO:0035239,GO:0035295,GO:0035735,GO:0035869,GO:0036064,GO:0036126,GO:0040024,GO:0042073,GO:0042127,GO:0042592,GO:0042995,GO:0043009,GO:0043010,GO:0043053,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044238,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0045494,GO:0045880,GO:0045892,GO:0045934,GO:0046907,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048562,GO:0048565,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048646,GO:0048699,GO:0048729,GO:0048731,GO:0048736,GO:0048793,GO:0048856,GO:0048869,GO:0048871,GO:0050678,GO:0050680,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051604,GO:0051641,GO:0051649,GO:0051716,GO:0055115,GO:0055123,GO:0060021,GO:0060041,GO:0060173,GO:0060249,GO:0060255,GO:0060271,GO:0060322,GO:0060348,GO:0060429,GO:0060562,GO:0060606,GO:0060972,GO:0061371,GO:0061525,GO:0065007,GO:0065008,GO:0070925,GO:0070986,GO:0071704,GO:0071840,GO:0072001,GO:0072175,GO:0072359,GO:0080090,GO:0097014,GO:0097223,GO:0097225,GO:0097228,GO:0097435,GO:0097542,GO:0097598,GO:0097708,GO:0097729,GO:0097730,GO:0099111,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1901564,GO:1902531,GO:1902679,GO:1903506,GO:1903507,GO:1905515,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc. cilium assembly
EggNOG OGs KOG3616@1,KOG3616@2759
COG Functional cat. S
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko03036
Exons 4
Model size 675
Cds size 675
Stop 0
Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622815808.6926086-CDS-L-elsbetiae_contig1949:21009..21135 1622815808.6926086-CDS-L-elsbetiae_contig1949:21009..21135 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1949 21010..21135 +
1691683116.4331021-CDS-L-elsbetiae_contig1949:21009..21135 1691683116.4331021-CDS-L-elsbetiae_contig1949:21009..21135 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1949 21010..21135 +
1622815808.7033052-CDS-L-elsbetiae_contig1949:21456..21648 1622815808.7033052-CDS-L-elsbetiae_contig1949:21456..21648 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1949 21457..21648 +
1691683116.4442608-CDS-L-elsbetiae_contig1949:21456..21648 1691683116.4442608-CDS-L-elsbetiae_contig1949:21456..21648 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1949 21457..21648 +
1622815808.718221-CDS-L-elsbetiae_contig1949:21895..22151 1622815808.718221-CDS-L-elsbetiae_contig1949:21895..22151 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1949 21896..22151 +
1691683116.4526274-CDS-L-elsbetiae_contig1949:21895..22151 1691683116.4526274-CDS-L-elsbetiae_contig1949:21895..22151 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1949 21896..22151 +
1622815808.7295327-CDS-L-elsbetiae_contig1949:22545..22646 1622815808.7295327-CDS-L-elsbetiae_contig1949:22545..22646 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1949 22546..22646 +
1691683116.4609714-CDS-L-elsbetiae_contig1949:22545..22646 1691683116.4609714-CDS-L-elsbetiae_contig1949:22545..22646 Laminarionema elsbetiae ELsaHSoW15 CDS L-elsbetiae_contig1949 22546..22646 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1949.5792.1
>prot_L-elsbetiae_contig1949.5792.1 ID=prot_L-elsbetiae_contig1949.5792.1|Name=mRNA_L-elsbetiae_contig1949.5792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=225bp
MQLRHLNTLTQPTAGEGSDDVKMSKVMAVAWAPNNRKLAVCTADRVVSLY DENGEKRDRFSTKPAEKGPKIYIVRDLCFSPDSTRLAVAQSDSIVFVYKL GLEWGESKSICNKFPQSSPITCMSWPEARPNEVVFGLAEGKVKIGQLKSN KPATLYNVDSFCASLATSPDGNGVVSAHADGTLYRFLFDDNGAPSHTKLV IHPSVPYALSWGISIVAAGNDGQVT back to top mRNA from alignment at L-elsbetiae_contig1949:21010..22646+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1949.5792.1 ID=mRNA_L-elsbetiae_contig1949.5792.1|Name=mRNA_L-elsbetiae_contig1949.5792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1637bp|location=Sequence derived from alignment at L-elsbetiae_contig1949:21010..22646+ (Laminarionema elsbetiae ELsaHSoW15)ATGCAGCTGAGACATTTGAACACTTTGACGCAGCCGACCGCCGGCGAGGG
AAGTGATGACGTCAAGATGTCCAAGGTCATGGCGGTGGCTTGGGCACCGA
ACAACCGCAAGCTGGCAGTTTGCACG GTGAGAAACAAGGAAACAACTCAT
TTAGCGATACAGAGATCACACTTTTGATGGTGTAAAAAAATAATAAAAAA
TATAGATTACACATCTCGGGCCGGACCACTCGAGAAAAAATTAACACCTC
TCACGCCCTCGTCTTCCCCCGAGGCTAGGCGGCCTCAACGAAGGCTCAAG
TATGTAGACTGTATTATAGGTGGAAGAGAAGGTCCGCCACAAACCAAGCA
TGCGTGATCCAACAATCAAGCAACGAAGCCCAGCCGCCCGTCACCGCTCG
GCTTCCTTCACCTCCGCCACCCCCTTCGCTTCCACTTCCCCGAAAAGGCG
GATCGAGTGGTCTCTCTGTACGACGAAAACGGGGAAAAGCGAGACAGATT
TTCCACCAAGCCCGCGGAGAAGGGGCCGAAGATCTACATCGTCAGAGACC
TGTGTTTCAGCCCCGATAGCACAAGGCTCGCCGTAGCCCAAAGCGATAGC
ATCGTCTTTGTCTATAAGCTCGGGTTGGAGTGGGGAGAG GTATGCACTTT
TTTTTAAACGAGAGGGAGCGCGCGTGCGCGTGACGTGACCGGGGAGGGGG
CGAGGACGAGTAGCGTAGAGTGCTGCAGCAGGCTCTCCCTCTTTTTCCCG
CGCAGTCCTTGCTTCCAACGCATAAGCCACTAACCTGCATCAACAATTTT
GCCCCACAACACCTCCAATCATATACTTACAGCACGTGCCCCCTGCGCCC
CCTTCCCCTCCCTTTCACCCCGCACCCGCCCGCTAGAGCAAGAGCATCTG
CAACAAGTTTCCGCAGTCTTCTCCGATCACGTGCATGTCGTGGCCGGAGG
CTAGGCCTAACGAGGTCGTCTTCGGCCTCGCGGAGGGGAAGGTCAAGATA
GGCCAGCTCAAGTCAAATAAGCCCGCGACGCTGTACAACGTTGACAGCTT
CTGCGCGTCGCTGGCAACGAGCCCGGATGGCAACGGTGTGGTGTCTGCTC
ACGCGGACGGGACCCTCTACCGTTTCCTCTTCGACGATAACG GTGCGTTT
TCGCTCGCGTGCAGGCACGCCTGGTTGTCGGTTCGGTAGTTTCATTTGGC
TACCGTTCGGTTGTTGTTTTTCTCGTGGCTTCTCTCTGAAAGGTATTTCG
TTTGTATAGCGTTTAAAGACAGCAGTAGCGGTGCTTGCGTATCAAGGGCC
GTCTTTGAAGCCTACTATTGTCCTACAATGTCTACCATAAACAGCCGGCG
TGTGCAGCCATCTTGCCGGTGACGAAATGATACCCCTATGTGTTGCACAT
GACCAAGAGAGAGAGAGAGAGAGAGAGAGAGTTGGACGAAATAACACATT
TCGAGTTCCCGCATGGCGCTTGAATTTGATCGCTGTTATCTACCCCGCAC
ACGGCGGGCGGACGCTCACACACGCACACACTGCAGGCGCGCCATCCCAC
ACGAAGCTCGTGATCCATCCTTCCGTTCCATACGCGCTAAGCTGGGGGAT
CAGCATCGTGGCCGCAGGGAACGACGGTCAGGTAACA back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1949:21010..22646+
>mRNA_L-elsbetiae_contig1949.5792.1 ID=mRNA_L-elsbetiae_contig1949.5792.1|Name=mRNA_L-elsbetiae_contig1949.5792.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1350bp|location=Sequence derived from alignment at L-elsbetiae_contig1949:21010..22646+ (Laminarionema elsbetiae ELsaHSoW15) ATGCAGCTGAGACATTTGAACACTTTGACGCAGCCGACCGCCGGCGAGGG AAGTGATGACGTCAAGATGTCCAAGGTCATGGCGGTGGCTTGGGCACCGA ACAACCGCAAGCTGGCAGTTTGCACGATGCAGCTGAGACATTTGAACACT TTGACGCAGCCGACCGCCGGCGAGGGAAGTGATGACGTCAAGATGTCCAA GGTCATGGCGGTGGCTTGGGCACCGAACAACCGCAAGCTGGCAGTTTGCA CGGCGGATCGAGTGGTCTCTCTGTACGACGAAAACGGGGAAAAGCGAGAC AGATTTTCCACCAAGCCCGCGGAGAAGGGGCCGAAGATCTACATCGTCAG AGACCTGTGTTTCAGCCCCGATAGCACAAGGCTCGCCGTAGCCCAAAGCG ATAGCATCGTCTTTGTCTATAAGCTCGGGTTGGAGTGGGGAGAGGCGGAT CGAGTGGTCTCTCTGTACGACGAAAACGGGGAAAAGCGAGACAGATTTTC CACCAAGCCCGCGGAGAAGGGGCCGAAGATCTACATCGTCAGAGACCTGT GTTTCAGCCCCGATAGCACAAGGCTCGCCGTAGCCCAAAGCGATAGCATC GTCTTTGTCTATAAGCTCGGGTTGGAGTGGGGAGAGAGCAAGAGCATCTG CAACAAGTTTCCGCAGTCTTCTCCGATCACGTGCATGTCGTGGCCGGAGG CTAGGCCTAACGAGGTCGTCTTCGGCCTCGCGGAGGGGAAGGTCAAGATA GGCCAGCTCAAGTCAAATAAGCCCGCGACGCTGTACAACGTTGACAGCTT CTGCGCGTCGCTGGCAACGAGCCCGGATGGCAACGGTGTGGTGTCTGCTC ACGCGGACGGGACCCTCTACCGTTTCCTCTTCGACGATAACGAGCAAGAG CATCTGCAACAAGTTTCCGCAGTCTTCTCCGATCACGTGCATGTCGTGGC CGGAGGCTAGGCCTAACGAGGTCGTCTTCGGCCTCGCGGAGGGGAAGGTC AAGATAGGCCAGCTCAAGTCAAATAAGCCCGCGACGCTGTACAACGTTGA CAGCTTCTGCGCGTCGCTGGCAACGAGCCCGGATGGCAACGGTGTGGTGT CTGCTCACGCGGACGGGACCCTCTACCGTTTCCTCTTCGACGATAACGGC GCGCCATCCCACACGAAGCTCGTGATCCATCCTTCCGTTCCATACGCGCT AAGCTGGGGGATCAGCATCGTGGCCGCAGGGAACGACGGTCAGGTAACAG CGCGCCATCCCACACGAAGCTCGTGATCCATCCTTCCGTTCCATACGCGC TAAGCTGGGGGATCAGCATCGTGGCCGCAGGGAACGACGGTCAGGTAACA back to top