mRNA_L-elsbetiae_contig19213.5682.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig19213.5682.1 vs. uniprot
Match: D7FJ86_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ86_ECTSI) HSP 1 Score: 123 bits (308), Expect = 1.570e-30 Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 2 Query: 110 CYICCERRADAVVMECGHGGVCFACATQLADTPPHLCPVCRDPIQEILKLHEVREFGRVVAMP 298 CYICCERRADAV+MECGHGGVCF CAT LAD+PPHLCPVCR IQE+ KLHE+REFGRVV +P Sbjct: 781 CYICCERRADAVMMECGHGGVCFTCATTLADSPPHLCPVCRKVIQEVFKLHEIREFGRVVVVP 843
BLAST of mRNA_L-elsbetiae_contig19213.5682.1 vs. uniprot
Match: A0A7S0I1C8_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I1C8_9EUKA) HSP 1 Score: 71.6 bits (174), Expect = 4.240e-14 Identity = 33/68 (48.53%), Postives = 41/68 (60.29%), Query Frame = 2 Query: 83 DGVEGPRAVCYICCERRADAVVMECGHGGVCFACATQLADTPPHLCPVCRDPIQEILKLHEVREFGRV 286 D +G C+ICC DAV+MECGHGG+C CATQ A P LCP+CR I ++K+ E G V Sbjct: 37 DSDDGEEPTCWICCSGPCDAVLMECGHGGICMDCATQCAKKRPPLCPLCRARILVVVKVGAPDEAGIV 104
BLAST of mRNA_L-elsbetiae_contig19213.5682.1 vs. uniprot
Match: A0A7S3ZTM6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTM6_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 8.520e-14 Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 2 Query: 98 PRAVCYICCERRADAVVMECGHGGVCFACATQLADTPPHLCPVCRDPIQEILKLHEVREFG 280 P +CY+CC R +AV+MECGHGG+CF C LA P CP+CR PI +L++ E RE G Sbjct: 536 PSHLCYVCCVSRKNAVIMECGHGGICFECGKSLASRHPRNCPICRAPISAVLRV-ERREPG 595
BLAST of mRNA_L-elsbetiae_contig19213.5682.1 vs. uniprot
Match: R1BX35_EMIHU (RING-type domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BX35_EMIHU) HSP 1 Score: 67.0 bits (162), Expect = 3.330e-12 Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 2 Query: 83 DGVEGPRAV---CYICCERRADAVVMECGHGGVCFACATQLADTPPHLCPVCRDPIQEILKLHEVREFGRVVAMP 298 DG + P AV C+IC E DAV++ECGHGG+C ACA ++ LCP+CR P+ ++++L G + MP Sbjct: 24 DGSDTPDAVEDRCWICYEGPRDAVLLECGHGGICVACARRVFKKRGRLCPMCRQPVSQMVQLQLGDGHGSELEMP 98
BLAST of mRNA_L-elsbetiae_contig19213.5682.1 vs. uniprot
Match: A0A7S3JUI3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUI3_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 4.820e-12 Identity = 30/51 (58.82%), Postives = 36/51 (70.59%), Query Frame = 2 Query: 107 VCYICCERRADAVVMECGHGGVCFACATQLADTPPHLCPVCRDPIQEILKL 259 +CYIC DAV+MECGH GVCF+CA +LA P CP+CR PI +LKL Sbjct: 429 LCYICYVAPRDAVLMECGHAGVCFSCAQKLAVRHPRSCPICRQPISTVLKL 479
BLAST of mRNA_L-elsbetiae_contig19213.5682.1 vs. uniprot
Match: A0A7J7Q9S5_9CHLO (RING-type domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q9S5_9CHLO) HSP 1 Score: 69.7 bits (169), Expect = 9.110e-12 Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 2 Query: 41 GGMSSAAASSVGAGDGVEGP-----RAVCYICCERRADAVVMECGHGGVCFACATQLADTPPHLCPVCRDPIQEILKLHE 265 GGM+SAAA++ A + P +C IC + +A V MECGHGG C+ CA L PP CPVCR PIQ++++L + Sbjct: 505 GGMASAAAAAGTAAARIASPCGDVDDGLCTICYDSQASCVFMECGHGGYCWRCAHVLFARPPSECPVCRQPIQQVVELED 584
BLAST of mRNA_L-elsbetiae_contig19213.5682.1 vs. uniprot
Match: A0A699ZH23_HAELA (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699ZH23_HAELA) HSP 1 Score: 65.9 bits (159), Expect = 3.070e-11 Identity = 26/60 (43.33%), Postives = 41/60 (68.33%), Query Frame = 2 Query: 107 VCYICCERRADAVVMECGHGGVCFACATQLADTPPHLCPVCRDPIQEILKLHEVREFGRV 286 +C IC ++ + V ++CGHGG C ACA ++ PP+ CP CR I+++++L EVR G+V Sbjct: 109 LCVICYDKPSSCVFLDCGHGGFCKACAYRIFVRPPNECPTCRQHIEQVVELEEVRPTGQV 168
BLAST of mRNA_L-elsbetiae_contig19213.5682.1 vs. uniprot
Match: A0A383WG86_TETOB (RING-type domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WG86_TETOB) HSP 1 Score: 65.5 bits (158), Expect = 2.800e-10 Identity = 27/53 (50.94%), Postives = 35/53 (66.04%), Query Frame = 2 Query: 107 VCYICCERRADAVVMECGHGGVCFACATQLADTPPHLCPVCRDPIQEILKLHE 265 +C IC + A V MECGHGG C+ CA L PP CPVCR PIQ++++L + Sbjct: 533 LCTICYDNHASCVFMECGHGGYCWRCAHLLFARPPSECPVCRQPIQQVVELED 585
BLAST of mRNA_L-elsbetiae_contig19213.5682.1 vs. uniprot
Match: A0A7S4F120_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F120_CHRCT) HSP 1 Score: 65.1 bits (157), Expect = 2.940e-10 Identity = 24/50 (48.00%), Postives = 37/50 (74.00%), Query Frame = 2 Query: 110 CYICCERRADAVVMECGHGGVCFACATQLADTPPHLCPVCRDPIQEILKL 259 C+ICC ADAV+++CGHGG+C+ACA + PH+CP+CR I+ + ++ Sbjct: 245 CWICCLSTADAVLLDCGHGGLCYACAERCWRRSPHICPLCRASIKVVARV 294
BLAST of mRNA_L-elsbetiae_contig19213.5682.1 vs. uniprot
Match: A0A7S3EPQ4_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EPQ4_9EUKA) HSP 1 Score: 61.6 bits (148), Expect = 3.270e-10 Identity = 25/60 (41.67%), Postives = 40/60 (66.67%), Query Frame = 2 Query: 80 GDGVEGPRAVCYICCERRADAVVMECGHGGVCFACATQLADTPPHLCPVCRDPIQEILKL 259 GDG + ++C IC E + DAV++ECGHGG+C+ACA + CP+CR P+ +++ + Sbjct: 24 GDGTD---SLCLICFEGQRDAVLLECGHGGICYACARRCFKKKRRECPMCRQPVTQVVHI 80 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19213.5682.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19213.5682.1 >prot_L-elsbetiae_contig19213.5682.1 ID=prot_L-elsbetiae_contig19213.5682.1|Name=mRNA_L-elsbetiae_contig19213.5682.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=101bp RAARGYAEETELAGGDVVGGGLLGGRRRRGGGAPRRVLHLLRAEGGRGGDback to top mRNA from alignment at L-elsbetiae_contig19213:1852..2155+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig19213.5682.1 ID=mRNA_L-elsbetiae_contig19213.5682.1|Name=mRNA_L-elsbetiae_contig19213.5682.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=304bp|location=Sequence derived from alignment at L-elsbetiae_contig19213:1852..2155+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19213:1852..2155+ >mRNA_L-elsbetiae_contig19213.5682.1 ID=mRNA_L-elsbetiae_contig19213.5682.1|Name=mRNA_L-elsbetiae_contig19213.5682.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=606bp|location=Sequence derived from alignment at L-elsbetiae_contig19213:1852..2155+ (Laminarionema elsbetiae ELsaHSoW15)back to top |