mRNA_L-elsbetiae_contig1917.5660.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1917.5660.1 vs. uniprot
Match: A0A6H5K5U0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5U0_9PHAE) HSP 1 Score: 111 bits (278), Expect = 1.380e-26 Identity = 64/98 (65.31%), Postives = 70/98 (71.43%), Query Frame = 1 Query: 1 VWSGKIVLDELQVNPEAVNQLRLPINIIHGTVKKLEVDIPWAHLGSRPVKVVLEGVSVLVGPVDRDSWGDGEVRERRLGIKRAALEKAEAASKK-KEG 291 VWSG IVLDELQV +IPW+ LGSRPVKV+L+GVSVLVGPVDR+SWGD EVRERRLGIKRAALEKAEAA+KK KEG Sbjct: 30 VWSGTIVLDELQV------------------------EIPWSKLGSRPVKVLLQGVSVLVGPVDRNSWGDQEVRERRLGIKRAALEKAEAATKKEKEG 103
BLAST of mRNA_L-elsbetiae_contig1917.5660.1 vs. uniprot
Match: A0A836C8S3_9STRA (Peroxin/Ferlin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8S3_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.420e-25 Identity = 52/93 (55.91%), Postives = 67/93 (72.04%), Query Frame = 1 Query: 1 VWSGKIVLDELQVNPEAVNQLRLPINIIHGTVKKLEVDIPWAHLGSRPVKVVLEGVSVLVGPVDRDSWGDGEVRERRLGIKRAALEKAEAASK 279 VWSG+I L +LQVN +AVNQL+LPI I HGTV+ V IPWA L PV+V ++GV +L+GPV ++ W EVR+RRL IKR L+ AE A + Sbjct: 30 VWSGEIELHDLQVNEKAVNQLQLPITIAHGTVRSFRVSIPWASLDRNPVRVEIDGVYLLLGPVRKEDWAAEEVRQRRLAIKRGQLDAAERAGR 122
BLAST of mRNA_L-elsbetiae_contig1917.5660.1 vs. uniprot
Match: A0A7S3YJ41_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJ41_HETAK) HSP 1 Score: 100 bits (249), Expect = 3.750e-24 Identity = 47/95 (49.47%), Postives = 68/95 (71.58%), Query Frame = 1 Query: 1 VWSGKIVLDELQVNPEAVNQLRLPINIIHGTVKKLEVDIPWAHLGSRPVKVVLEGVSVLVGPVDRDSWGDGEVRERRLGIKRAALEKAEAASKKK 285 V+ GKI L++LQ+N +VN+L+LP+ ++HG+V+K VDIPW L PVKV + GV++LVGP+ + W D EV++RRL IK+ L AE K+K Sbjct: 30 VFKGKIELNDLQLNENSVNELQLPLTVLHGSVEKFLVDIPWLALDKEPVKVEIAGVNLLVGPIQQGGWDDKEVKKRRLEIKKMQLASAEKEFKEK 124
BLAST of mRNA_L-elsbetiae_contig1917.5660.1 vs. uniprot
Match: A0A0A1T5T5_9HYPO (Vacuolar protein sorting-associated protein n=1 Tax=Torrubiella hemipterigena TaxID=1531966 RepID=A0A0A1T5T5_9HYPO) HSP 1 Score: 81.6 bits (200), Expect = 5.540e-16 Identity = 37/89 (41.57%), Postives = 60/89 (67.42%), Query Frame = 1 Query: 1 VWSGKIVLDELQVNPEAVNQLRLPINIIHGTVKKLEVDIPWAHLGSRPVKVVLEGVSVLVGPVDRDSWGDGEVRERRLGIKRAALEKAE 267 +WSG + L +LQ+ EA++QL+LPIN++HG + +L + IPW++L PVKV++E V +L P + ++ + E ERR +K L+ AE Sbjct: 30 IWSGDVKLRDLQLRREALDQLKLPINVMHGHLGELTLVIPWSNLRGAPVKVLIEDVYLLASPKEEAAYDEAEEEERRQRVKMEKLDNAE 118
BLAST of mRNA_L-elsbetiae_contig1917.5660.1 vs. uniprot
Match: UPI0015C3A9C6 (vacuolar protein sorting-associated protein 13A/C n=1 Tax=Geosmithia morbida TaxID=1094350 RepID=UPI0015C3A9C6) HSP 1 Score: 80.1 bits (196), Expect = 1.930e-15 Identity = 37/89 (41.57%), Postives = 59/89 (66.29%), Query Frame = 1 Query: 1 VWSGKIVLDELQVNPEAVNQLRLPINIIHGTVKKLEVDIPWAHLGSRPVKVVLEGVSVLVGPVDRDSWGDGEVRERRLGIKRAALEKAE 267 +WSG + L LQ+ EA++QL+LP+N++ G V +L + IPW++LG PVKV++E V +L P + D++ + E R+ +K LE AE Sbjct: 15 IWSGDVKLRNLQLRREALDQLKLPVNVMEGHVGELTLVIPWSNLGGAPVKVLVEDVFLLASPREEDAYDEDEEAMRKQRLKMEKLESAE 103
BLAST of mRNA_L-elsbetiae_contig1917.5660.1 vs. uniprot
Match: A0A2J6QIU7_9HELO (Vacuolar protein sorting-associated protein n=1 Tax=Hyaloscypha hepaticicola TaxID=2082293 RepID=A0A2J6QIU7_9HELO) HSP 1 Score: 79.0 bits (193), Expect = 4.900e-15 Identity = 35/89 (39.33%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 1 VWSGKIVLDELQVNPEAVNQLRLPINIIHGTVKKLEVDIPWAHLGSRPVKVVLEGVSVLVGPVDRDSWGDGEVRERRLGIKRAALEKAE 267 +WSG + L +L++ EA++QL+LPIN++ G + +L + IPW++L +PV+V +E V VL P + W + E +RR +K L+ AE Sbjct: 30 IWSGDVKLRDLELRREALDQLKLPINVVEGHLGQLTLKIPWSNLRGQPVQVYIEDVFVLAAPKEDAEWDEEEEEQRRQAVKIEKLDSAE 118
BLAST of mRNA_L-elsbetiae_contig1917.5660.1 vs. uniprot
Match: F0YBC1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBC1_AURAN) HSP 1 Score: 79.0 bits (193), Expect = 4.910e-15 Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 1 VWSGKIVLDELQVNPEAVNQLRLPINIIHGTVKKLEVDIPWAHLGSRPVKVVLEGVSVLVGPVDRDSWGDGEVRERRLGIKRAA-LEKAEAA 273 +WSGKI LD L+VN EA +L LP+ I+ G V +L V IPW LGS+PV++ + GVSVL P S D + LG AA LE A+AA Sbjct: 570 LWSGKIELDNLEVNVEAARKLGLPVRIVFGKVARLSVSIPWTALGSQPVRIFIRGVSVLAAP--EASPADSADLAKELGDALAARLEAADAA 659
BLAST of mRNA_L-elsbetiae_contig1917.5660.1 vs. uniprot
Match: A0A0H5QT29_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QT29_9EUKA) HSP 1 Score: 79.0 bits (193), Expect = 4.920e-15 Identity = 34/72 (47.22%), Postives = 50/72 (69.44%), Query Frame = 1 Query: 1 VWSGKIVLDELQVNPEAVNQLRLPINIIHGTVKKLEVDIPWAHLGSRPVKVVLEGVSVLVGPV-----DRDS 201 +WSG+IVLD L + P + +L+LP+N+ G +K+L+V +PWA LGS PVK+ LEG+ V+ P DRD+ Sbjct: 29 IWSGEIVLDNLSLKPSCLTRLKLPVNVSLGVLKRLQVKVPWASLGSSPVKITLEGLYVIARPAHGATFDRDA 100
BLAST of mRNA_L-elsbetiae_contig1917.5660.1 vs. uniprot
Match: A0A218ZH20_9HELO (Vacuolar protein sorting-associated protein n=1 Tax=Marssonina coronariae TaxID=503106 RepID=A0A218ZH20_9HELO) HSP 1 Score: 78.2 bits (191), Expect = 9.140e-15 Identity = 35/89 (39.33%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 1 VWSGKIVLDELQVNPEAVNQLRLPINIIHGTVKKLEVDIPWAHLGSRPVKVVLEGVSVLVGPVDRDSWGDGEVRERRLGIKRAALEKAE 267 +WSG + L +L++ EA++QL+LPIN++ G + +L + IPW++L +PV+V +E V VL P + W + E RR +K L+ AE Sbjct: 30 IWSGDVKLRDLELRREALDQLKLPINVVEGHLGQLTLKIPWSNLRGQPVQVYIEDVFVLAAPKEDAEWDEEEXXRRRQAVKIEKLDSAE 118
BLAST of mRNA_L-elsbetiae_contig1917.5660.1 vs. uniprot
Match: A0A194X511_9HELO (Vacuolar protein sorting-associated protein n=1 Tax=Mollisia scopiformis TaxID=149040 RepID=A0A194X511_9HELO) HSP 1 Score: 78.2 bits (191), Expect = 9.140e-15 Identity = 35/89 (39.33%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 1 VWSGKIVLDELQVNPEAVNQLRLPINIIHGTVKKLEVDIPWAHLGSRPVKVVLEGVSVLVGPVDRDSWGDGEVRERRLGIKRAALEKAE 267 +WSG + L +L++ EA++QL+LPIN++ G + +L + IPW++L +PV+V +E V VL P + W + E RR +K L+ AE Sbjct: 30 IWSGDVKLRDLELRREALDQLKLPINVVEGHLGQLTLKIPWSNLRGQPVQVYIEDVFVLAAPKEDAEWDEEEXXRRRQAVKIEKLDSAE 118 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1917.5660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1917.5660.1 >prot_L-elsbetiae_contig1917.5660.1 ID=prot_L-elsbetiae_contig1917.5660.1|Name=mRNA_L-elsbetiae_contig1917.5660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=97bp VWSGKIVLDELQVNPEAVNQLRLPINIIHGTVKKLEVDIPWAHLGSRPVKback to top mRNA from alignment at L-elsbetiae_contig1917:135..5065- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1917.5660.1 ID=mRNA_L-elsbetiae_contig1917.5660.1|Name=mRNA_L-elsbetiae_contig1917.5660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4931bp|location=Sequence derived from alignment at L-elsbetiae_contig1917:135..5065- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1917:135..5065- >mRNA_L-elsbetiae_contig1917.5660.1 ID=mRNA_L-elsbetiae_contig1917.5660.1|Name=mRNA_L-elsbetiae_contig1917.5660.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=582bp|location=Sequence derived from alignment at L-elsbetiae_contig1917:135..5065- (Laminarionema elsbetiae ELsaHSoW15)back to top |