mRNA_L-elsbetiae_contig1910.5631.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1910.5631.1 vs. uniprot
Match: D8LJP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJP2_ECTSI) HSP 1 Score: 189 bits (481), Expect = 1.340e-56 Identity = 94/96 (97.92%), Postives = 95/96 (98.96%), Query Frame = 1 Query: 25 KAIFLNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAVFF 312 +AIF NGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAVFF Sbjct: 142 RAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAVFF 237
BLAST of mRNA_L-elsbetiae_contig1910.5631.1 vs. uniprot
Match: A0A835YVB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVB1_9STRA) HSP 1 Score: 164 bits (415), Expect = 9.380e-47 Identity = 79/100 (79.00%), Postives = 89/100 (89.00%), Query Frame = 1 Query: 13 GGGGKAIFLNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAVFF 312 GGG +AIFLNG+LHGFSWDGAPSLAPALA ++W VLWFLLAYC GTM AMSA TT+IGEGSVRVG+AL+QPDIP++LSVVSS +AI IGAVWL KA FF Sbjct: 127 GGGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVWLVKAAFF 226
BLAST of mRNA_L-elsbetiae_contig1910.5631.1 vs. uniprot
Match: A0A4D9DEM4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEM4_9STRA) HSP 1 Score: 126 bits (317), Expect = 4.970e-32 Identity = 60/95 (63.16%), Postives = 77/95 (81.05%), Query Frame = 1 Query: 22 GKAIFLNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAV 306 GKA+FLNG+LHGFSWDG P+LAPALA SW V+ FL +Y GTM++MS T+LIGEG+V+VG+ALD+P+IP+KL+ SS VAI +G VW KA+ Sbjct: 142 GKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKAL 236
BLAST of mRNA_L-elsbetiae_contig1910.5631.1 vs. uniprot
Match: A0A1Z5K0A1_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K0A1_FISSO) HSP 1 Score: 125 bits (313), Expect = 1.760e-31 Identity = 59/94 (62.77%), Postives = 73/94 (77.66%), Query Frame = 1 Query: 25 KAIFLNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAV 306 +A+ NG+LHGFSWDGAPSLAPA+A+++WG L FL AY GTM M+ TTLIGEG+ + G+ LD+PDIP+KLS VSS +AI IGAVW AV Sbjct: 139 RAVLFNGILHGFSWDGAPSLAPAVAVATWGGSLAFLSAYAVGTMTTMALATTLIGEGTRKAGQVLDRPDIPQKLSFVSSILAIVIGAVWCYLAV 232
BLAST of mRNA_L-elsbetiae_contig1910.5631.1 vs. uniprot
Match: W7TPT7_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPT7_9STRA) HSP 1 Score: 126 bits (317), Expect = 7.330e-31 Identity = 60/95 (63.16%), Postives = 77/95 (81.05%), Query Frame = 1 Query: 22 GKAIFLNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAV 306 GKA+FLNG+LHGFSWDG P+LAPALA SW V+ FL +Y GTM++MS T+LIGEG+V+VG+ALD+P+IP+KL+ SS VAI +G VW KA+ Sbjct: 266 GKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKAL 360
BLAST of mRNA_L-elsbetiae_contig1910.5631.1 vs. uniprot
Match: A0A1Z5K7J2_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7J2_FISSO) HSP 1 Score: 124 bits (310), Expect = 2.140e-30 Identity = 58/94 (61.70%), Postives = 73/94 (77.66%), Query Frame = 1 Query: 25 KAIFLNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAV 306 +A+ NG+LHGFSWDGAPSLAPA+A+++WG L FL AY GTM M+ TTLIGEG+ + G+ LD+PDIP+KLS VSS +A+ IGAVW AV Sbjct: 202 RAVLFNGILHGFSWDGAPSLAPAVAVATWGGSLAFLSAYAIGTMTTMALATTLIGEGTRKAGQVLDRPDIPQKLSFVSSILAMVIGAVWCYLAV 295
BLAST of mRNA_L-elsbetiae_contig1910.5631.1 vs. uniprot
Match: A0A7S2KN96_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KN96_9STRA) HSP 1 Score: 119 bits (299), Expect = 3.730e-30 Identity = 54/94 (57.45%), Postives = 71/94 (75.53%), Query Frame = 1 Query: 25 KAIFLNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAV 306 +A+ NG+LHGFSWDGAPSLAPA+A+++W L FLL+Y GTM AM+ TT+IGEG+ R LD+PD+PR LSV SSF+A+ +G VW A+ Sbjct: 74 RAVLFNGILHGFSWDGAPSLAPAVAIATWRGSLTFLLSYALGTMAAMALATTIIGEGTRRAAGKLDRPDLPRDLSVASSFLALVVGIVWCGLAL 167
BLAST of mRNA_L-elsbetiae_contig1910.5631.1 vs. uniprot
Match: A0A7R9ZRD8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRD8_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.020e-29 Identity = 55/93 (59.14%), Postives = 70/93 (75.27%), Query Frame = 1 Query: 25 KAIFLNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKA 303 +++ NG+LHGFSWDGAPSLAPALAL++WG L FL +Y +GTM AM+ TTTLIGEG+ R + +PDIP+KLS SS +AI IG +W A Sbjct: 97 RSVIFNGLLHGFSWDGAPSLAPALALATWGGNLAFLSSYAAGTMAAMAVTTTLIGEGTRRASEVFQRPDIPQKLSFFSSLLAIAIGVIWCGLA 189
BLAST of mRNA_L-elsbetiae_contig1910.5631.1 vs. uniprot
Match: A0A7S4J5J5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5J5_9STRA) HSP 1 Score: 120 bits (300), Expect = 2.290e-29 Identity = 56/94 (59.57%), Postives = 73/94 (77.66%), Query Frame = 1 Query: 25 KAIFLNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAV 306 +A+ NGVLHGFSWDGAPSLAPA+A+++W + FLLAY GTM AM+ TTTLIGEG+ + G+ L +PDIP+KLS VSS +AI +G W + A+ Sbjct: 157 RAVVFNGVLHGFSWDGAPSLAPAVAVATWRGNITFLLAYALGTMAAMTITTTLIGEGTRKAGEVLHRPDIPQKLSFVSSIIAIGVGLFWCSLAL 250
BLAST of mRNA_L-elsbetiae_contig1910.5631.1 vs. uniprot
Match: A0A7S0FTD7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FTD7_9STRA) HSP 1 Score: 117 bits (294), Expect = 3.790e-29 Identity = 54/89 (60.67%), Postives = 71/89 (79.78%), Query Frame = 1 Query: 25 KAIFLNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVW 291 +A+ NGVLHGFSWDGAPSLAPA+A+++W + FLL+Y GTM AM+ TTT+IGEG+ + G+ L +PDIP+KLS SS VA+ +GAVW Sbjct: 100 RAVVFNGVLHGFSWDGAPSLAPAVAVATWTGNITFLLSYALGTMSAMAITTTIIGEGTRQAGEILHRPDIPQKLSYFSSIVALVVGAVW 188 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1910.5631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1910.5631.1 >prot_L-elsbetiae_contig1910.5631.1 ID=prot_L-elsbetiae_contig1910.5631.1|Name=mRNA_L-elsbetiae_contig1910.5631.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=105bp AKNSGGGGKAIFLNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGback to top mRNA from alignment at L-elsbetiae_contig1910:4517..8107- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1910.5631.1 ID=mRNA_L-elsbetiae_contig1910.5631.1|Name=mRNA_L-elsbetiae_contig1910.5631.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3591bp|location=Sequence derived from alignment at L-elsbetiae_contig1910:4517..8107- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1910:4517..8107- >mRNA_L-elsbetiae_contig1910.5631.1 ID=mRNA_L-elsbetiae_contig1910.5631.1|Name=mRNA_L-elsbetiae_contig1910.5631.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=630bp|location=Sequence derived from alignment at L-elsbetiae_contig1910:4517..8107- (Laminarionema elsbetiae ELsaHSoW15)back to top |