mRNA_L-elsbetiae_contig19097.5623.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig19097.5623.1 vs. uniprot
Match: D7FQK3_ECTSI (Argonaute 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQK3_ECTSI) HSP 1 Score: 242 bits (618), Expect = 2.410e-72 Identity = 118/126 (93.65%), Postives = 125/126 (99.21%), Query Frame = 1 Query: 43 QTSQNAYDCITALDISLRHAPSMKLTCVGRSFFTPEMPSPISGGAEVWLGYYQSLRATQAGLTLNVDMSAMAFVRSMPMMEFVCELLGVRDPSRLSRGLKPFDRRKLETALKGVNVEVTHRKSSRQ 420 QTSQNAYDCITALDISLRHAPSMKLTCVGRSFFTP+MPSPISGGAEVWLGYYQSLRATQAGLTLNVDMSAMAFVRSMPMM+FVCELLGVRDP +LSRG++P+DRRKLETALKGVNVEVTHRKS+RQ Sbjct: 246 QTSQNAYDCITALDISLRHAPSMKLTCVGRSFFTPDMPSPISGGAEVWLGYYQSLRATQAGLTLNVDMSAMAFVRSMPMMDFVCELLGVRDPGQLSRGIRPYDRRKLETALKGVNVEVTHRKSNRQ 371
BLAST of mRNA_L-elsbetiae_contig19097.5623.1 vs. uniprot
Match: A0A2S1PRW8_FUCSE (Putative argonaute n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRW8_FUCSE) HSP 1 Score: 233 bits (594), Expect = 6.430e-69 Identity = 112/125 (89.60%), Postives = 122/125 (97.60%), Query Frame = 1 Query: 46 TSQNAYDCITALDISLRHAPSMKLTCVGRSFFTPEMPSPISGGAEVWLGYYQSLRATQAGLTLNVDMSAMAFVRSMPMMEFVCELLGVRDPSRLSRGLKPFDRRKLETALKGVNVEVTHRKSSRQ 420 T+QNAYDCITALDISLRHAPSM LTCVGRSF++PEMPSPISGGAEVWLGYYQSLRATQAGLTLNVDMSAMAFVRSMPMM+FVCELLG+RDP LSRG++P+D+RKLETALKGVNVEVTHRKS+RQ Sbjct: 256 TTQNAYDCITALDISLRHAPSMALTCVGRSFYSPEMPSPISGGAEVWLGYYQSLRATQAGLTLNVDMSAMAFVRSMPMMDFVCELLGIRDPGMLSRGIRPYDKRKLETALKGVNVEVTHRKSNRQ 380
BLAST of mRNA_L-elsbetiae_contig19097.5623.1 vs. uniprot
Match: A0A397TJF0_9GLOM (Piwi domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TJF0_9GLOM) HSP 1 Score: 119 bits (299), Expect = 1.280e-28 Identity = 58/123 (47.15%), Postives = 79/123 (64.23%), Query Frame = 1 Query: 37 RQQTSQNAYDCITALDISLRHAPSMKLTCVGRSFFTPEMPSPISGGAEVWLGYYQSLRATQAGLTLNVDMSAMAFVRSMPMMEFVCELLGVRDPSRLSRGLKPFDRRKLETALKGVNVEVTHR 405 ++Q + N I ALD+ + H PSMK VGRSFFTP+ +SGGAEVW GYYQS R TQ + +NVD+SA F P+++ + +LLG R P L RG+ D +K+E ++K + V VTHR Sbjct: 123 KRQLTSNCLTAIMALDVLIHHEPSMKFVTVGRSFFTPQDSQVLSGGAEVWQGYYQSARPTQRKMMINVDLSATTFYERGPLLQMITKLLGRRTPDDLRRGVTSKDYQKVERSIKNLKVRVTHR 245
BLAST of mRNA_L-elsbetiae_contig19097.5623.1 vs. uniprot
Match: A0A015JUG7_RHIIW (Uncharacterized protein n=8 Tax=Rhizophagus TaxID=1129544 RepID=A0A015JUG7_RHIIW) HSP 1 Score: 119 bits (297), Expect = 2.380e-28 Identity = 59/130 (45.38%), Postives = 82/130 (63.08%), Query Frame = 1 Query: 16 LLVYLCIRQQTSQNAYDCITALDISLRHAPSMKLTCVGRSFFTPEMPSPISGGAEVWLGYYQSLRATQAGLTLNVDMSAMAFVRSMPMMEFVCELLGVRDPSRLSRGLKPFDRRKLETALKGVNVEVTHR 405 L+++L ++Q + N I ALD+ + H PSM VG SFFTP PISGGAE+W GYYQS R TQ + +NVD+SA AF P++ + +LLG R P L RG+ D +K+E ++K + + VTHR Sbjct: 137 LVLFLGGKRQLTPNCLTAIMALDVIIHHQPSMDYVTVGHSFFTPRDSRPISGGAEIWQGYYQSARPTQGKMMINVDLSATAFYERGPLLLMITKLLGRRTPDDLRRGVSDKDYQKIERSIKNLKIRVTHR 266
BLAST of mRNA_L-elsbetiae_contig19097.5623.1 vs. uniprot
Match: A0A2P4P2X8_RHIID (Uncharacterized protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=A0A2P4P2X8_RHIID) HSP 1 Score: 119 bits (297), Expect = 2.520e-28 Identity = 59/130 (45.38%), Postives = 82/130 (63.08%), Query Frame = 1 Query: 16 LLVYLCIRQQTSQNAYDCITALDISLRHAPSMKLTCVGRSFFTPEMPSPISGGAEVWLGYYQSLRATQAGLTLNVDMSAMAFVRSMPMMEFVCELLGVRDPSRLSRGLKPFDRRKLETALKGVNVEVTHR 405 L+++L ++Q + N I ALD+ + H PSM VG SFFTP PISGGAE+W GYYQS R TQ + +NVD+SA AF P++ + +LLG R P L RG+ D +K+E ++K + + VTHR Sbjct: 134 LVLFLGGKRQLTPNCLTAIMALDVIIHHQPSMDYVTVGHSFFTPRDSRPISGGAEIWQGYYQSARPTQGKMMINVDLSATAFYERGPLLLMITKLLGRRTPDDLRRGVSDKDYQKIERSIKNLKIRVTHR 263
BLAST of mRNA_L-elsbetiae_contig19097.5623.1 vs. uniprot
Match: A0A835Z8Z7_9STRA (Argonaute 1 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z7_9STRA) HSP 1 Score: 117 bits (293), Expect = 8.290e-28 Identity = 59/129 (45.74%), Postives = 84/129 (65.12%), Query Frame = 1 Query: 34 IRQQTSQNAYDCITALDISLRHAPSMKLTCVGRSFFTPEMPSPISGGAEVWLGYYQSLRATQAGLTLNVDMSAMAFVRSMPMMEFVCELLGVRDPSRLSRGLKPF-DRRKLETALKGVNVEVTHRKSSR 417 +R + ++A D I ALD+ LR P+MKL GR+F+ P PISGGAEVWLGYYQSLR QAG+T N D++A AF++ MP++EF+C L RDP +L + L +++ A+ + + V HR + R Sbjct: 168 LRGERRESAVDVINALDVVLRTVPTMKLVSAGRNFYMPTSDYPISGGAEVWLGYYQSLRPGQAGVTFNADLAASAFLKPMPVLEFLCLQLNCRDPRQLQQALGEMRGQKQASKAIATLAITVNHRPTKR 296
BLAST of mRNA_L-elsbetiae_contig19097.5623.1 vs. uniprot
Match: A0A6V7IJU4_9HYME (PAZ domain-containing protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7IJU4_9HYME) HSP 1 Score: 111 bits (278), Expect = 5.120e-27 Identity = 56/122 (45.90%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 43 QTSQNAYDCITALDISLRHAPSMKLTCVGRSFF-TPE-MPSPISGGAEVWLGYYQSLRATQAGLTLNVDMSAMAFVRSMPMMEFVCELLGVRDPSRLSRGLKPFDRRKLETALKGVNVEVTH 402 +T Q YD I ALD+ +RH PSM T VGRSFF TP+ P+ GG EVW G++QS+R +Q + LN+D+SA AF ++ P++EF+CE+L +RD + + L R K +KG+ +E+TH Sbjct: 34 RTRQIPYDAILALDVVMRHLPSMTYTPVGRSFFSTPDGYYHPLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRDVNEQRKPLTDSQRVKFTKEIKGLKIEITH 155
BLAST of mRNA_L-elsbetiae_contig19097.5623.1 vs. uniprot
Match: A0A7S3UXA3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXA3_HETAK) HSP 1 Score: 115 bits (287), Expect = 5.320e-27 Identity = 66/128 (51.56%), Postives = 85/128 (66.41%), Query Frame = 1 Query: 46 TSQNA-YDCITALDISLRHAPSMKLTCVGRSFFTPEMPSPISGGAEVWLGYYQSLRATQAGLTLNVDMSAMAFVRSMPMMEF---VCELLGVRDPSRLSRGLKPFDRRKLETALKGVNVEVTHRKSSR 417 TS N DC TALDI LR+ PS+++T VG SFF+ E +SGG E+W G+YQSLRATQ+GLTLNVD SA AFVR P++E+ VC V D L RG+ P + R L++ L + V V HR ++R Sbjct: 160 TSSNVPLDCFTALDIVLRNMPSVRMTSVGASFFSNENAFQMSGGTELWFGWYQSLRATQSGLTLNVDTSATAFVRPQPVLEYAAHVCRKRSVDD--LLHRGIGPREHRILKSELNWLMVSVNHRDNAR 285
BLAST of mRNA_L-elsbetiae_contig19097.5623.1 vs. uniprot
Match: A0A026VZA9_OOCBI (Protein argonaute-4 n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A026VZA9_OOCBI) HSP 1 Score: 111 bits (277), Expect = 9.480e-27 Identity = 56/122 (45.90%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 43 QTSQNAYDCITALDISLRHAPSMKLTCVGRSFF-TPE-MPSPISGGAEVWLGYYQSLRATQAGLTLNVDMSAMAFVRSMPMMEFVCELLGVRDPSRLSRGLKPFDRRKLETALKGVNVEVTH 402 +T Q YD I ALD+ +RH PSM T VGRSFF TP+ P+ GG EVW G++QS+R +Q + LN+D+SA AF ++ P++EF+CE+L +RD + + L R K +KG+ +E+TH Sbjct: 187 RTRQIPYDAILALDVVMRHLPSMTYTPVGRSFFSTPDGYYHPLGGGREVWFGFHQSVRPSQWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRDINEQRKPLTDSQRVKFTKEIKGLKIEITH 308
BLAST of mRNA_L-elsbetiae_contig19097.5623.1 vs. uniprot
Match: A0A015ILK1_RHIIW (Uncharacterized protein n=11 Tax=Glomeraceae TaxID=36751 RepID=A0A015ILK1_RHIIW) HSP 1 Score: 114 bits (284), Expect = 1.340e-26 Identity = 58/117 (49.57%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 64 DCITA---LDISLRHAPSMKLTCVGRSFFTPEMPSPISGGAEVWLGYYQSLRATQAGLTLNVDMSAMAFVRSMPMMEFVCELLGVRDPSRLSRGLKPFDRRKLETALKGVNVEVTHR 405 +C+TA LD+ +RH PSM+ VGRSFFT P+ GGAEVW GYYQS R Q + +NVD+SA AF S P+++ V ++LG R+P L RG DR K+E LK + + VTHR Sbjct: 147 NCLTATMALDVLIRHLPSMRHVTVGRSFFTNAGAEPLFGGAEVWQGYYQSARPAQEKMLINVDLSATAFYESGPLIQMVTKILGRRNPDDLRRGFSDKDRIKVEKTLKNLKIRVTHR 263 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19097.5623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig19097.5623.1 >prot_L-elsbetiae_contig19097.5623.1 ID=prot_L-elsbetiae_contig19097.5623.1|Name=mRNA_L-elsbetiae_contig19097.5623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=140bp MYVLLVYLCIRQQTSQNAYDCITALDISLRHAPSMKLTCVGRSFFTPEMPback to top mRNA from alignment at L-elsbetiae_contig19097:141..1434+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig19097.5623.1 ID=mRNA_L-elsbetiae_contig19097.5623.1|Name=mRNA_L-elsbetiae_contig19097.5623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1294bp|location=Sequence derived from alignment at L-elsbetiae_contig19097:141..1434+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig19097:141..1434+ >mRNA_L-elsbetiae_contig19097.5623.1 ID=mRNA_L-elsbetiae_contig19097.5623.1|Name=mRNA_L-elsbetiae_contig19097.5623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=840bp|location=Sequence derived from alignment at L-elsbetiae_contig19097:141..1434+ (Laminarionema elsbetiae ELsaHSoW15)back to top |