mRNA_L-elsbetiae_contig1908.5618.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1908.5618.1 vs. uniprot
Match: D8LRQ8_ECTSI (Imp1 homolog, Inner Membrane Peptidase complex subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ8_ECTSI) HSP 1 Score: 257 bits (657), Expect = 1.690e-85 Identity = 124/152 (81.58%), Postives = 134/152 (88.16%), Query Frame = 1 Query: 22 VFYLSHAQCAGPSMIPTFNQSGDVIFAEMLSPRIGCLERGDVVIAVPPQNPKLRVCKRIIGLPGETVFVHSRSWFNDRPELVPEGHVWLEGDNPSNSSDSRSYGPIPLAMVRGRVFFKAWPPLEIGRVKRRVPEAASTVIGRETASDSDSFG 477 +F+L QC+GPSMIP FNQSGDVIFAEM S + G L+RGDVVIA+PPQNPKLRVCKRIIGLPGETV V SRSWF+DRPE VPEGHVWLEGDNPSNSSDSR+YGPIPLAMVRGRVFFKAWPP EIGRV RRVPEAAS V+ RETA+DS G Sbjct: 7 IFFL---QCSGPSMIPAFNQSGDVIFAEMFSAKTGRLDRGDVVIAIPPQNPKLRVCKRIIGLPGETVIVRSRSWFDDRPEFVPEGHVWLEGDNPSNSSDSRTYGPIPLAMVRGRVFFKAWPPSEIGRVARRVPEAASAVLPRETAADSSISG 155
BLAST of mRNA_L-elsbetiae_contig1908.5618.1 vs. uniprot
Match: A0A1Y1I0M7_KLENI (Peptidase S24/S26A/S26B/S26C family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I0M7_KLENI) HSP 1 Score: 144 bits (362), Expect = 5.980e-41 Identity = 66/135 (48.89%), Postives = 90/135 (66.67%), Query Frame = 1 Query: 19 GVFYLSHAQCAGPSMIPTFNQSGDVIFAEMLSPRIGCLERGDVVIAVPPQNPKLRVCKRIIGLPGETVFVHSRSWFND-RPELVPEGHVWLEGDNPSNSSDSRSYGPIPLAMVRGRVFFKAWPPLEIGRVKRRVP 420 G + + C GPSM+P+FN G++IF E +SPR+G L+ GDVV A P+NP +CKRI+GL G+ + V + R VP+GHVWL+GDN S DSR YGP+P A+V+G+V FK WPP + G V+ R+P Sbjct: 30 GTYVMDVTTCVGPSMLPSFNAEGNIIFVEHISPRLGRLKAGDVVTAQSPRNPNAVICKRILGLEGDRIRVPPTMPRDSIRLVTVPKGHVWLQGDNQFVSRDSREYGPVPAALVKGKVVFKIWPPSQFGHVESRIP 164
BLAST of mRNA_L-elsbetiae_contig1908.5618.1 vs. uniprot
Match: C1MQ53_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MQ53_MICPC) HSP 1 Score: 141 bits (356), Expect = 2.210e-40 Identity = 65/122 (53.28%), Postives = 83/122 (68.03%), Query Frame = 1 Query: 46 CAGPSMIPTFNQSGDVIFAEMLSPRIGCLERGDVVIAVPPQNPKLRVCKRIIGLPGETVFVHSRSWFNDRPEL-VPEGHVWLEGDNPSNSSDSRSYGPIPLAMVRGRVFFKAWPPLEIGRVK 408 C GPSM+PTFN+SGDV+ E +S +E GDVVIA P NP+ VCKR++G G+ + V F + VP GH+WL+GDN NS+DSR YGP+P A++RG+VF K WPP EIG VK Sbjct: 16 CLGPSMLPTFNRSGDVVLMEHVSVMRNAIETGDVVIAKSPSNPRHTVCKRVLGRGGDVIHVPKAGHFGGTMRVEVPTGHLWLQGDNKDNSTDSRDYGPVPYALLRGKVFVKVWPPSEIGWVK 137
BLAST of mRNA_L-elsbetiae_contig1908.5618.1 vs. uniprot
Match: A0A388M5S7_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M5S7_CHABU) HSP 1 Score: 142 bits (358), Expect = 2.410e-40 Identity = 68/125 (54.40%), Postives = 89/125 (71.20%), Query Frame = 1 Query: 46 CAGPSMIPTFNQSGDVIFAEMLSPRIGCLERGDVVIAVPPQNPKLRVCKRIIGLPGETV-FVHSRSWFNDRPELVPEGHVWLEGDNPSNSSDSRSYGPIPLAMVRGRVFFKAWPPLEIGRVKRRV 417 C GPSM+PTFN SGDV+ E +S ++ L+ GDVV+A P NP+L VCKRI+G+ G+ V V + R +VP+GHVWL+GDN NS+DSR YGP+P AMV+G+VF+K WPP E G V R+ Sbjct: 38 CMGPSMMPTFNPSGDVVLLEHVSTKLNRLKAGDVVVAKSPTNPRLIVCKRIVGVSGDRVTIVPIKETEQLRHVVVPKGHVWLQGDNIRNSTDSRHYGPVPSAMVKGKVFYKIWPPREWGPVGSRL 162
BLAST of mRNA_L-elsbetiae_contig1908.5618.1 vs. uniprot
Match: A0A7S0N2K5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N2K5_9CRYP) HSP 1 Score: 141 bits (355), Expect = 1.430e-39 Identity = 67/121 (55.37%), Postives = 85/121 (70.25%), Query Frame = 1 Query: 46 CAGPSMIPTFNQSGDVIFAEMLSPRIGCLERGDVVIAVPPQNPKLRVCKRIIGLPGETVFVH-SRSWFNDRPELVPEGHVWLEGDNPSNSSDSRSYGPIPLAMVRGRVFFKAWPPLEIGRV 405 C GPSM+PTFN GDV+ E S R L GDVV+A P NP+ VCKRI+G+PG+ V + S+ + R LVP GHVWL+GDN +NS+DSRSYG +P+A++RGRVF+K WP E G V Sbjct: 69 CVGPSMLPTFNMEGDVVLVEFHSKRSNSLSVGDVVVARSPTNPRQSVCKRIVGMPGDIVQAPPAYSFQSPRHHLVPAGHVWLQGDNLANSTDSRSYGAVPIALIRGRVFYKVWPWPERGPV 189
BLAST of mRNA_L-elsbetiae_contig1908.5618.1 vs. uniprot
Match: A0A674HY96_TERCA (Mitochondrial inner membrane protease subunit n=13 Tax=Archelosauria TaxID=1329799 RepID=A0A674HY96_TERCA) HSP 1 Score: 140 bits (353), Expect = 1.460e-39 Identity = 62/118 (52.54%), Postives = 83/118 (70.34%), Query Frame = 1 Query: 46 CAGPSMIPTFNQSGDVIFAEMLSPRIGCLERGDVVIAVPPQNPKLRVCKRIIGLPGETVFVHSRSWFNDRPELVPEGHVWLEGDNPSNSSDSRSYGPIPLAMVRGRVFFKAWPPLEIG 399 C+GPSM PT Q+ D++F+E LS C+++GD+VIA P +PK +CKR+IGL G+ V + S S F VP+GHVWLEGDN NS+DSR YGP+P ++RGR+ FK WPP + G Sbjct: 36 CSGPSMEPTI-QNSDIVFSENLSRHFYCIQKGDIVIAKSPNDPKSNICKRVIGLEGDKVCISSPSDFRKSHSYVPKGHVWLEGDNLRNSTDSRCYGPVPYGLIRGRICFKIWPPNDFG 152
BLAST of mRNA_L-elsbetiae_contig1908.5618.1 vs. uniprot
Match: A0A2R5GLJ3_9STRA (Mitochondrial inner membrane protease subunit 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GLJ3_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.710e-39 Identity = 64/122 (52.46%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 46 CAGPSMIPTFNQSGDVIFAEMLSPRIGCLERGDVVIAVPPQNPKLRVCKRIIGLPGETVFVHSR-SWFNDRPELVPEGHVWLEGDNPSNSSDSRSYGPIPLAMVRGRVFFKAWPPLEIGRVK 408 C GPSM+PTF+ +GD++ + +SP +E+GD+VIA P NP+ VCKR+ G+PGE V V R S+ DR VP+G VWLEGDNP NS+DSR+YG +P+ +++GRVFF+ WP IG V+ Sbjct: 154 CVGPSMLPTFSSAGDIVLVDRISPLRLKIEKGDIVIAQSPTNPRQTVCKRVKGMPGERVRVAQRYSYERDRIVKVPKGRVWLEGDNPKNSTDSRAYGAVPMGLIKGRVFFRLWPLTAIGPVR 275
BLAST of mRNA_L-elsbetiae_contig1908.5618.1 vs. uniprot
Match: A0A015ICH6_RHIIW (Imp1p n=7 Tax=Rhizophagus TaxID=1129544 RepID=A0A015ICH6_RHIIW) HSP 1 Score: 139 bits (349), Expect = 5.560e-39 Identity = 61/113 (53.98%), Postives = 82/113 (72.57%), Query Frame = 1 Query: 46 CAGPSMIPTFNQSGDVIFAEMLSPRIGCLERGDVVIAVPPQNPKLRVCKRIIGLPGETVFVHSRSWFNDRPELVPEGHVWLEGDNPSNSSDSRSYGPIPLAMVRGRVFFKAWP 384 C GPSM+PTFN GD++ E SP++ LE GDVV+ + P NP VCKRI+G+PG+ + + + N + +VP GHVWL+GDN SNS+DSRSYGP+P A++RGRVF + WP Sbjct: 38 CIGPSMLPTFNMIGDIVVLEHFSPKLKRLEIGDVVVCISPTNPWRAVCKRILGMPGDRICIDP-TVINRKYIIVPRGHVWLQGDNMSNSTDSRSYGPVPYALIRGRVFARIWP 149
BLAST of mRNA_L-elsbetiae_contig1908.5618.1 vs. uniprot
Match: I0YPG6_COCSC (LexA/Signal peptidase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YPG6_COCSC) HSP 1 Score: 139 bits (350), Expect = 7.070e-39 Identity = 65/127 (51.18%), Postives = 85/127 (66.93%), Query Frame = 1 Query: 46 CAGPSMIPTFNQSGDVIFAEMLSPRIGCLERGDVVIAVPPQNPKLRVCKRIIGLPGETVFVHSRSWFND-RPELVPEGHVWLEGDNPSNSSDSRSYGPIPLAMVRGRVFFKAWPPLEIGRVKRRVPE 423 C GPSM+PTFN GDV+ E ++ G + GDVV+A QNPK VCKR++GL G+ V V + + R VP GHVWL+GDN NS+DSR YGP+P A+++GR F K WPP E+G ++ VPE Sbjct: 50 CMGPSMLPTFNTRGDVLLLEHITTTFGHVRVGDVVLARSLQNPKQIVCKRVLGLEGDEVRVAPSTHLGEGRMVKVPRGHVWLQGDNTLNSTDSRHYGPVPYALIKGRAFLKVWPPHEVGLIRSYVPE 176
BLAST of mRNA_L-elsbetiae_contig1908.5618.1 vs. uniprot
Match: W7TET3_9STRA (Mitochondrial inner membrane protease subunit 1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TET3_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.090e-38 Identity = 67/139 (48.20%), Postives = 95/139 (68.35%), Query Frame = 1 Query: 49 AGPSMIPTFNQSGDVIFAEMLSPRIGC-LERGDVVIAVPPQNPKLRVCKRIIGLPGETVFVHSRSWFNDRPEL-VPEGHVWLEGDNPSNSSDSRSYGPIPLAMVRGRVFFKAWPPLEIGRVKR--RVPEAASTVIGRET 453 AGPSM+PTFN++GD++ + L ++G L++GD+VIA P NP VCKR++GLPG+ + + + W+ L VP G +WLEGDNP NS+DSR+YGP+P+A+V+G V FK +P E G + R R P A + RET Sbjct: 57 AGPSMLPTFNEAGDIVVVDCLHVKLGRPLQKGDIVIARSPSNPSNTVCKRVLGLPGDRILIQPQYWYQQEQVLQVPPGMLWLEGDNPFNSTDSRTYGPVPMALVKGLVAFKLYPLHEFGPLPRTFRRPGARYPKLDRET 195 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1908.5618.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1908.5618.1 >prot_L-elsbetiae_contig1908.5618.1 ID=prot_L-elsbetiae_contig1908.5618.1|Name=mRNA_L-elsbetiae_contig1908.5618.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=159bp MRLVSHGVFYLSHAQCAGPSMIPTFNQSGDVIFAEMLSPRIGCLERGDVVback to top mRNA from alignment at L-elsbetiae_contig1908:18061..19631- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1908.5618.1 ID=mRNA_L-elsbetiae_contig1908.5618.1|Name=mRNA_L-elsbetiae_contig1908.5618.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1571bp|location=Sequence derived from alignment at L-elsbetiae_contig1908:18061..19631- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1908:18061..19631- >mRNA_L-elsbetiae_contig1908.5618.1 ID=mRNA_L-elsbetiae_contig1908.5618.1|Name=mRNA_L-elsbetiae_contig1908.5618.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=954bp|location=Sequence derived from alignment at L-elsbetiae_contig1908:18061..19631- (Laminarionema elsbetiae ELsaHSoW15)back to top |