mRNA_L-elsbetiae_contig1901.5597.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1901.5597.1 vs. uniprot
Match: D7FLL8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLL8_ECTSI) HSP 1 Score: 186 bits (472), Expect = 2.400e-53 Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 1 Query: 10 GASMIGGLLFTSLASANFGVNIKTWRLFADASNDIGLALEMLAPLPAFREGGRFLRLICVASVFKAACGVAGGATGAAITEHWAVDNNIADIGAK 294 GASMIGGLLFTS+ASANFGVNIKTWRLFAD SNDIGLALEMLAPLPAFREGGRFLRLIC+ASVFKAACGVAGGATGAAITEHWA+DNNIADIGAK Sbjct: 267 GASMIGGLLFTSVASANFGVNIKTWRLFADTSNDIGLALEMLAPLPAFREGGRFLRLICIASVFKAACGVAGGATGAAITEHWAIDNNIADIGAK 361
BLAST of mRNA_L-elsbetiae_contig1901.5597.1 vs. uniprot
Match: A0A813KE75_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KE75_POLGL) HSP 1 Score: 107 bits (268), Expect = 3.630e-25 Identity = 52/95 (54.74%), Postives = 71/95 (74.74%), Query Frame = 1 Query: 10 GASMIGGLLFTSLASANFGVNIKTWRLFADASNDIGLALEMLAPLPAFREGGRFLRLICVASVFKAACGVAGGATGAAITEHWAVDNNIADIGAK 294 G+ M+GGL F + S F VN+KTWRLFAD +N++GL L++LAP+ G FL +ICVA+VFKA CGV+ GAT AA+T H+A+ +N+AD+ AK Sbjct: 144 GSGMVGGLGFATFCSVGFDVNVKTWRLFADVANNVGLTLDLLAPM----AGDYFLLVICVANVFKAMCGVSAGATKAALTAHFALRDNMADVQAK 234
BLAST of mRNA_L-elsbetiae_contig1901.5597.1 vs. uniprot
Match: A0A813HLD8_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HLD8_POLGL) HSP 1 Score: 107 bits (268), Expect = 7.030e-25 Identity = 52/95 (54.74%), Postives = 71/95 (74.74%), Query Frame = 1 Query: 10 GASMIGGLLFTSLASANFGVNIKTWRLFADASNDIGLALEMLAPLPAFREGGRFLRLICVASVFKAACGVAGGATGAAITEHWAVDNNIADIGAK 294 G+ M+GGL F + S F VN+KTWRLFAD +N++GL L++LAP+ G FL +ICVA+VFKA CGV+ GAT AA+T H+A+ +N+AD+ AK Sbjct: 79 GSGMVGGLGFATFCSVGFDVNVKTWRLFADVANNVGLTLDLLAPM----AGDYFLLVICVANVFKAMCGVSAGATKAALTAHFALRDNMADVQAK 169
BLAST of mRNA_L-elsbetiae_contig1901.5597.1 vs. uniprot
Match: A0A482SIE4_9ARCH (RUS1 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SIE4_9ARCH) HSP 1 Score: 101 bits (252), Expect = 7.550e-23 Identity = 59/113 (52.21%), Postives = 73/113 (64.60%), Query Frame = 1 Query: 10 GASMIGGLLFTSLASANFGVNIKTWRLFADASNDIGLALEMLAPLPAFREGGRFLRLICVASVFKAACGVAGGATGAAITEHWAVD-NNIADIGAKVSFLVLLVKFGGYSSAL 345 GAS+IGGLLFTSL+S NF NIK WRLFAD+ N++G+ L+ML P FL L+CV S KA CGVA GAT AAI+ HW N+ADI AK + +V G + +L Sbjct: 165 GASLIGGLLFTSLSSYNFVQNIKFWRLFADSINNVGITLDMLTPYFPLH----FLPLVCVGSTCKALCGVAAGATNAAISMHWGEKYGNVADILAKNNAQHTVVSLCGLAVSL 273
BLAST of mRNA_L-elsbetiae_contig1901.5597.1 vs. uniprot
Match: A0A7S2TJN0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TJN0_9EUKA) HSP 1 Score: 96.7 bits (239), Expect = 7.690e-23 Identity = 52/107 (48.60%), Postives = 68/107 (63.55%), Query Frame = 1 Query: 10 GASMIGGLLFTSLASANFGVNIKTWRLFADASNDIGLALEMLAPLPAFREGGRFLRLICVASVFKAACGVAGGATGAAITEHWAVDNNIADIGAKVSFLVLLVKFGG 330 G M+G LLF SL F N+K+WRLFAD N++GL L+M+APL FL ++C A++ KA CGVA GAT AA+T H+A++ N AD+ AK S L V G Sbjct: 79 GFGMVGSLLFASLCGPYFDTNVKSWRLFADLINNVGLFLDMIAPLTQ----EYFLLVVCFATICKAMCGVAAGATKAALTAHFALNGNNADVQAKESSQELAVTLMG 181
BLAST of mRNA_L-elsbetiae_contig1901.5597.1 vs. uniprot
Match: W7U3D2_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3D2_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 4.230e-22 Identity = 54/95 (56.84%), Postives = 67/95 (70.53%), Query Frame = 1 Query: 10 GASMIGGLLFTSLASANFGVNIKTWRLFADASNDIGLALEMLAPLPAFREGGRFLRLICVASVFKAACGVAGGATGAAITEHWAVDNNIADIGAK 294 GASM+ GL+FTS S NFGVN K+WRLFAD DIG+ L+MLAPL F + FL IC+ASV K+ CG+A GA+ I EH A NN+A++ AK Sbjct: 203 GASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPL--FPKN--FLLCICLASVCKSLCGIAAGASNGNIVEHMARTNNLAEVLAK 293
BLAST of mRNA_L-elsbetiae_contig1901.5597.1 vs. uniprot
Match: D7FQ06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ06_ECTSI) HSP 1 Score: 93.6 bits (231), Expect = 9.050e-21 Identity = 56/119 (47.06%), Postives = 74/119 (62.18%), Query Frame = 1 Query: 10 GASMIGGLLFTSLASANFGVNIKTWRLFADASNDIGLALEMLAPLPAFREGGRFLRLICVASVFKAACGVAGGATGAAITEHWAVDNNIADIGAK---------VSFLVLLVKFGGYSS 339 G MIG LLF+ AS++ NIK WRLFAD +ND+GL L+++AP+ FR G F + +A+VFKA CGVA G T +IT H+A+ N+ADI AK V ++L VK Y S Sbjct: 134 GFGMIGSLLFSYAASSHMDSNIKEWRLFADIANDVGLTLDLVAPV--FR--GNFAVVSSLATVFKALCGVAAGCTKTSITSHFALKQNMADISAKENAQETAVNVCGMLLGVKVASYLS 248
BLAST of mRNA_L-elsbetiae_contig1901.5597.1 vs. uniprot
Match: A0A7S2JJT8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JJT8_9EUKA) HSP 1 Score: 91.3 bits (225), Expect = 1.470e-19 Identity = 44/95 (46.32%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 10 GASMIGGLLFTSLASANFGVNIKTWRLFADASNDIGLALEMLAPLPAFREGGRFLRLICVASVFKAACGVAGGATGAAITEHWAVDNNIADIGAK 294 G M G L+F+ L F N+K WRLFAD ND+GL L+MLAPL G F+ + + + K CG+ GAT A+IT H+A+ NN+AD+ AK Sbjct: 140 GVGMFGSLVFSYLVGTGFDRNVKEWRLFADIINDLGLTLDMLAPLAGPAGGTNFMVVAALGACCKTICGMTAGATRASITNHFALRNNLADVSAK 234
BLAST of mRNA_L-elsbetiae_contig1901.5597.1 vs. uniprot
Match: R1DHG9_EMIHU (Uncharacterized protein (Fragment) n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DHG9_EMIHU) HSP 1 Score: 88.6 bits (218), Expect = 6.740e-19 Identity = 45/95 (47.37%), Postives = 57/95 (60.00%), Query Frame = 1 Query: 10 GASMIGGLLFTSLASANFGVNIKTWRLFADASNDIGLALEMLAPLPAFREGGRFLRLICVASVFKAACGVAGGATGAAITEHWAVDNNIADIGAK 294 G M G LLF SL F N+K WRLFAD ND+GL L MLAP+ G RF + + S + CG+ GAT A+IT H+A+ N+AD+ AK Sbjct: 122 GFGMCGSLLFASLVGVGFDENVKEWRLFADLINDVGLTLNMLAPM----AGERFFLVAALGSTCTSICGMVAGATRASITAHFALSGNLADVSAK 212
BLAST of mRNA_L-elsbetiae_contig1901.5597.1 vs. uniprot
Match: A0A0G4IXP7_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IXP7_PLABS) HSP 1 Score: 89.7 bits (221), Expect = 1.080e-18 Identity = 50/114 (43.86%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 1 YLKGASMIGGLLFTSLASANFGVNIKTWRLFADASNDIGLALEMLAPLPAFREGGRFLRLICVASVFKAACGVAGGATGAAITEHWAVDNN----IADIGAKVSFLVLLVKFGG 330 +L G SM+GG+LF S +FG + KTWRLFAD ND+GL L M AP G FL + C+ S+ A CGVA GAT AAIT+H+ + ++DI +K +V G Sbjct: 119 FLHGMSMLGGVLFAFRTSTDFGADPKTWRLFADCVNDVGLTLTMAAPA----TGRLFLLVACLGSICSAVCGVAAGATKAAITQHFCRQRSNSALVSDIYSKEGIQETIVSITG 228 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1901.5597.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1901.5597.1 >prot_L-elsbetiae_contig1901.5597.1 ID=prot_L-elsbetiae_contig1901.5597.1|Name=mRNA_L-elsbetiae_contig1901.5597.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=109bp MIGGLLFTSLASANFGVNIKTWRLFADASNDIGLALEMLAPLPAFREGGRback to top mRNA from alignment at L-elsbetiae_contig1901:21969..22720+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1901.5597.1 ID=mRNA_L-elsbetiae_contig1901.5597.1|Name=mRNA_L-elsbetiae_contig1901.5597.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=752bp|location=Sequence derived from alignment at L-elsbetiae_contig1901:21969..22720+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1901:21969..22720+ >mRNA_L-elsbetiae_contig1901.5597.1 ID=mRNA_L-elsbetiae_contig1901.5597.1|Name=mRNA_L-elsbetiae_contig1901.5597.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=654bp|location=Sequence derived from alignment at L-elsbetiae_contig1901:21969..22720+ (Laminarionema elsbetiae ELsaHSoW15)back to top |