mRNA_L-elsbetiae_contig190.5590.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig190.5590.1
Unique NamemRNA_L-elsbetiae_contig190.5590.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig190.5590.1 vs. uniprot
Match: A0A6H5KLB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLB3_9PHAE)

HSP 1 Score: 631 bits (1628), Expect = 1.930e-203
Identity = 388/486 (79.84%), Postives = 416/486 (85.60%), Query Frame = 2
Query:  176 MGLTSSKTIIPIKEAEMKLGPVLRMKLDKAYHRITESGVGEARALDAKAFQRNFLEAFPLMPKILVESLFDAFGASRRGAVSLEEFVCAVAVMHRGTAPEQLRMLFEVYDIRRSTYIEVEHVRRLLDHVYGSPHSKAIDHALAWLFRVSSREDEMDAEEFIARLTPVVDYRGTAAAAQAEPLLQWFRVLCTRILEEPHPAVVALEQRYNPERDLNKVVTKYKLSPGLTDLLCRRHALICRRSSANALDVQEWLSVVGYLIPEALARRVFQSFAQSGGLAWTVADLIRFLCACVLDSRQEHVSMMFQLFDVDRDGLLSETEVAQMLEHLAAYHAHRASG-----VGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDMAKLTLGLRKLGYEDLESIAVLDKQHVTNATXXXXXXXXGSA---GGSGVEVGESSXXXXXXXXXXXXXXXXXXXXXXRRLLREMRATSERYVAVPAAS 1609
            MGL  SKTIIPIKEA+ KLG  LRM++DKAY RITESG GEAR LD KAFQRNFLEAFP+MPKILVESLFDAFGA+RRGAVSLEEFVCAVAVMHRGTA EQLRMLFEVYDIRR+T+IE++HVRRLLDH+YGS HS+ +D ALAWLFRVSSREDEMDA+EFIARLTPVVD+RGTAAAAQAEPLLQWFRVLCTRILEEPHPAVVALEQRYNPERDLNKVVTKYKLS GLTD+LCRR A ICRRSSANALDVQEWLS VGYL PEALARRVFQ FAQSGGLAWTVADLIRFLC+ VLDSRQEHVS++FQLFDVDRDGLLSE EV QMLEHLA YHAHRASG       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DMA LTLGLRKLGYEDLES+ ++DKQ+  +A  XXXXX  GS    GGSG  V +S+                      R+LLR+MRATS+RYV VP AS
Sbjct:    1 MGLAGSKTIIPIKEADAKLGASLRMEMDKAYRRITESGNGEARLLDIKAFQRNFLEAFPMMPKILVESLFDAFGAARRGAVSLEEFVCAVAVMHRGTASEQLRMLFEVYDIRRATFIEIDHVRRLLDHIYGSAHSETVDQALAWLFRVSSREDEMDADEFIARLTPVVDFRGTAAAAQAEPLLQWFRVLCTRILEEPHPAVVALEQRYNPERDLNKVVTKYKLSAGLTDVLCRRQAFICRRSSANALDVQEWLSAVGYLFPEALARRVFQYFAQSGGLAWTVADLIRFLCSWVLDSRQEHVSIIFQLFDVDRDGLLSEREVEQMLEHLAVYHAHRASGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMASLTLGLRKLGYEDLESLILIDKQYGADAAAXXXXXTTGSGCDGGGSG-GVRDSADGTTRAVA--------------RKLLRDMRATSDRYVVVPPAS 471          
BLAST of mRNA_L-elsbetiae_contig190.5590.1 vs. uniprot
Match: D8LR49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR49_ECTSI)

HSP 1 Score: 589 bits (1519), Expect = 1.050e-188
Identity = 351/485 (72.37%), Postives = 376/485 (77.53%), Query Frame = 2
Query:  176 MGLTSSKTIIPIKEAEMKLGPVLRMKLDKAYHRITESGVGEARALDAKAFQRNFLEAFPLM-----------------------PKILVESLFDAFGASRRGAVSLEEFVCAVAVMHRGTAPEQLRMLFEVYDIRRSTYIEVEHVRRLLDHVYGSPHSKAIDHALAWLFRVSSREDEMDAEEFIARLTPVVDYRGTAAAAQAEPLLQWFRVLCTRILEEPHPAVVALEQRYNPERDLNKVVTKYKLSPGLTDLLCRRHALICRRSSANALDVQEWLSVVGYLIPEALARRVFQSFAQSGGLAWTVADLIRFLCACVLDSRQEHVSMMFQ--------------------------------------------------LFDVDRDGLLSETEVAQMLEHLAAYHAHRASGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDMAKLTLGLRKLGYEDLESIAVLDKQHVTNA 1411
            MGL  SKTIIPIKEA+ KLG  LR+++DKAYHRITESG+GEAR LD KAFQRNFLEAFP+M                       PKILVESLFDAFGA+RRGAVSLEEFVCAVAVMHRGTAPEQLRMLFEVYDIRR+T+IE++HVRRLLDH+YGS HS+ +D ALAWLFRVSSREDEMDA+EFIARLTPVVD+RGTAAAAQAEPLLQWFRVLCTRILEEPHPAVVALEQRYNPERDL+KVVTKYKLS GLTD+LCRRHA ICRRSSANALDVQEWLS VGYL PE LARRVFQ FAQSGGLAWTVADL+RFLC+ VLD RQEHVSMMFQ                                                  LFDVDRDGLLSE EVAQMLEHLA YHAHRASG  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          DMA LTLGLRKLGYEDLES+ ++DKQ+  +A
Sbjct:    1 MGLAGSKTIIPIKEADAKLGASLRIEMDKAYHRITESGIGEARLLDVKAFQRNFLEAFPMMNGDPEAADKDQHLKTREENLQHLPKILVESLFDAFGAARRGAVSLEEFVCAVAVMHRGTAPEQLRMLFEVYDIRRATFIEIDHVRRLLDHIYGSAHSETVDQALAWLFRVSSREDEMDADEFIARLTPVVDFRGTAAAAQAEPLLQWFRVLCTRILEEPHPAVVALEQRYNPERDLSKVVTKYKLSAGLTDVLCRRHAFICRRSSANALDVQEWLSSVGYLFPETLARRVFQYFAQSGGLAWTVADLLRFLCSWVLDPRQEHVSMMFQARRIRFALSCYTPIPLPPVPDALLRQNIAPLKTNTRRVNEKTSKNIRRCKLFDVDRDGLLSEREVAQMLEHLAVYHAHRASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA---------DMASLTLGLRKLGYEDLESLVLIDKQYGADA 476          
BLAST of mRNA_L-elsbetiae_contig190.5590.1 vs. uniprot
Match: A0A835YVN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN1_9STRA)

HSP 1 Score: 296 bits (758), Expect = 1.250e-83
Identity = 158/338 (46.75%), Postives = 213/338 (63.02%), Query Frame = 2
Query:  167 AGSMGLTSSKTIIPIKEAEMKLGPVLRMKLDKAYHRITESGVGEARALDAKAFQRNFLEAFPLMPKILVESLFDAFGASRRGAVSLEEFVCAVAVMHRGTAPEQLRMLFEVYDIRRSTYIEVEHVRRLLDHVYGSPHSKAIDHALAWLFRVSSREDEMDAEEFIARLTPVVDYRGTAAAAQAEPLLQWFRVLCTRILEEPHPAVVALEQRYNPERDLNKVVTKYKLSPGLTDLLCRRHALICRRSSANALDVQEWLSVVGYLIPEALARRVFQSFAQSGGLAWTVADLIRFLCACVLDSRQEHVSMMFQLFDVDRDGLLSETEVAQMLEHLAAYHAHR 1180
            + +MGL  SK II +KEA+  LGP +  KL+ AY RI++       ALD KAFQ++FL  FP+MPK LV+SLFDAF    RG +S +EF C +AVM +G    QLR+LFE+YD+RR  ++E E +RRLLD VY    + AID AL  LF    R D +D EEF A    VV        +   PL QWFR++C R +EE  P VVALEQRYNPER+L ++  KY++ P    LL R+H  + ++  A  +D+  WLS+   ++   LA R F++F++   + WTV+D + F CA V  S  EHV+++F LFD DRDG+LS  E+  MLE LA +H HR
Sbjct:   35 SSNMGLYGSKPIISVKEAQAMLGPAMWAKLEAAYRRISDGN-----ALDPKAFQKHFLAGFPMMPKNLVDSLFDAFDVGGRGFISEQEFCCGLAVMLKGPLDAQLRLLFEIYDVRRCGFVERERLRRLLDLVYAPEDAAAIDAALGCLFSGCQRGDRLDFEEFRA----VVANANVKQRSALGPLTQWFRIVCARSIEEADPGVVALEQRYNPERELARLARKYRILPAQQALLERKHMQLRQKGEAGRMDIGVWLSLAASVMHGDLAERCFRAFSRGPPMQWTVSDYVHFCCAAVRGSHHEHVTIVFNLFDDDRDGMLSIPELELMLESLAWHHMHR 363          
BLAST of mRNA_L-elsbetiae_contig190.5590.1 vs. uniprot
Match: A0A7S1C481_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C481_9STRA)

HSP 1 Score: 119 bits (298), Expect = 3.160e-24
Identity = 99/329 (30.09%), Postives = 153/329 (46.50%), Query Frame = 2
Query:  176 MGLTSSKTIIPIKEAEMKLGPVLRMKLDKAYHRITESGVGEARALDAKAFQRNFLEAFPLMPKILVESLFDAFGASRRGAVSLEEFVCAVAVMHRGTAPEQLRMLFEVYDIRRSTYIEVEHVRRLLDHVYGSPHSKA---IDHALAWLFRVS-SREDEMDAEEFIARLTPVVDYRGTAAAAQAEPLLQWFRVLCTRILEEPHPAVVALEQRYNPERDLNKVVTKYKLSPGLTDLLCRRHALICRRSSANALDVQEWLSVVGYLIPEALARRVFQSFAQSGGLAWTVADLIRFLCACVLDSRQEHVSMMFQLFDVDRDGLLSETEVAQML 1150
            MG  SS+ II   EA  +LG      +++ + R+     G A  +D   F+R+ L   PLMP+ L   LFDAF    RG +SL+ F+C VA++  GT  ++LR LF VYD+    ++  + +RR L  +  SP   A    D  +  +  V+ SR D +   E+ A  T        A+  + + LL WF  L +  +  P PA+ ALE+R +P R    + +  KL+      L      + R S +  +D      V G  +   L  R+F  F   G     V  +I  L  C   + +E V + F+LFD    G LS  ++  ++
Sbjct:    1 MGGRSSR-IISYDEACDRLGSEAVAAVEEGFRRLCARPRGLA-PMDGTTFRRDVLSDLPLMPQKLQTMLFDAFDIEGRGELSLDAFMCGVAIIRVGTEDQRLRFLFRVYDVDECGFLTRDDLRRAL-RLVNSPKIPAKGEYDRFIDDMLDVADSRGDGLTLAEWKAWATDA------ASRTKDKGLLSWFEKLASHFV--PDPAIAALEERLDPTRTRKSLASATKLTETEVGQLQAAIERLKRTSESGVVDRGVHTKVFGPHLSTHLTERLFAMFDPDGTGIANVGKMIEVLGLCCRGTFEEQVDLCFRLFDSSSSGALSAKDMTSVV 318          
BLAST of mRNA_L-elsbetiae_contig190.5590.1 vs. uniprot
Match: A0A7S2HM96_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2HM96_9DINO)

HSP 1 Score: 66.2 bits (160), Expect = 1.310e-9
Identity = 40/111 (36.04%), Postives = 65/111 (58.56%), Query Frame = 2
Query:  185 TSSKTIIPIKEAEMKLGPVLRMKLDKAYHRITESGV-GEARALDAKAFQRNFLEAFPLMPKILVESLFDAFGASRRGAVSLEEFVCAVAVMHRGTAPEQLRMLFEVYDIRR 514
            T+S+ +I    A  +LG     K+++ + R+   GV GE R  + +    N +   P+ P+ L E+LF+ F     GAV++++F+C +AV+  GT  E+LR+LF VYDI R
Sbjct:    2 TTSRPVIEYHAAVRRLGSSEVAKIEEGFERL---GVRGELRRSEFRTGFLNSVVGAPV-PEDLAEALFNGFDTGATGAVTVQQFICGLAVLRHGTPEEKLRLLFAVYDIDR 108          
BLAST of mRNA_L-elsbetiae_contig190.5590.1 vs. uniprot
Match: A0A6L2PZ56_COPFO (Ubiquitinyl hydrolase 1 n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2PZ56_COPFO)

HSP 1 Score: 71.6 bits (174), Expect = 3.380e-9
Identity = 66/275 (24.00%), Postives = 126/275 (45.82%), Query Frame = 2
Query:  356 MPKILVESLFDAFGASRRGAVSLEEFVCAVAVMHRGTAPEQLRMLFEVYDIRRSTYIEVEHVRRLLDHVYGSPHSKAIDHALAWLFRVSSREDEMDAEEFIARLTPVVDYRGTAAAAQAEPLLQWFRVLCTRILEEPHPAVVALEQRYNPERDLNKVVTKYKLSPGLTDL-------LCRRHALICRRSSANALDVQEWLSVVGYLIPEALARRVFQSFAQSGGLAWTVADLIRFLCACVLDSRQEHVSMMFQLFDVDRDGLLSETEVAQMLEHL 1159
            +P  + E +F A G +++G ++L++ +C + ++ RG   E+L+ LF +Y     +Y+  + ++R+L     +  +  +  ++A LF   S  D    EEF   LT         A   A  L +W       +L EP    ++ E          +  T Y+   G+T L       L +R+ L+  +S    LD++  + ++   +P ++   VF +F ++        ++   + A       E     F++FD+DRDG+LSE E+  M++ L
Sbjct:   43 VPTPVAEYIFSACGGTQKG-IALKDLLCGLVLLTRGREEEKLKFLFGLYSNESGSYVVRDELQRMLQ----ACENGYVPDSIASLF---SERDRATYEEFRDWLT---------AHPDATSLSRW-------LLSEPCTVTLSNEL---------ETPTFYQTLAGVTHLEETDIMELEKRYWLLKGQSRTGKLDLETLVPLISPPVPLSVCPGVFGAFDENRDSHIDFKEMACGISAACRGPLTERQKFCFKVFDIDRDGVLSEEELQHMVDVL 284          
BLAST of mRNA_L-elsbetiae_contig190.5590.1 vs. uniprot
Match: A0A1B6M1M9_9HEMI (Ubiquitinyl hydrolase 1 n=5 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6M1M9_9HEMI)

HSP 1 Score: 69.3 bits (168), Expect = 1.710e-8
Identity = 83/340 (24.41%), Postives = 147/340 (43.24%), Query Frame = 2
Query:  176 MGLTSSKTI-IPIKEAEMKLGPVLRMKLDKAYHRITESGVGEARALDAKAFQRNFLEAFPLMPKILVESLFDAFGASRRGAVSLEEFVCAVAVMHRGTAPEQLRMLFEVYDIRRSTYIEVEHVRRLLDHVYGSPHSKAIDHALAWLFRVSSREDEMDAEEFIARLTPVVDYRGTAAAAQAEPLLQWFRVLCTRILEEPHPAVVALEQRYNPERDLNKVVTKYKLSPGLTDL-------LCRRHALICRRSSANALDVQEWLSVVGYLIPEALARRVFQSFAQSGGLAWTVADLIRFLCACVLDSRQEHVSMMFQLFDVDRDGLLSETEVAQMLEHLAAYH 1171
            MG   SK I I  +EA  ++      +L +A+ R++         +  ++F ++ L     +P  + E ++ A G + +G ++L+E +C + ++ RG   E+++ LF +Y     TYI  E  ++ L     S    +I      LF    + D +  EEF   L    DY      ++A  L +W  +LC        P  V +           +  T Y+   G+T L       L +R+ ++   S    LD+     +V   +P ++   VF +F ++        ++   + A       E     F++FD+DRDGLLSETE+  M++ L   H
Sbjct:    1 MGAKDSKQICITYEEAVKRVTDAELKRLKEAFKRLSNLN----GFISKQSFVKDVLGDG--VPMAVAEYIYTACGGTTKG-IALKELLCGLVLITRGQDDEKIKFLFGLYSNESGTYILKEEFQKYLQVCESSYTPDSI----GTLFNERGK-DRVTLEEFGEWLR---DY------SEATSLSRW--LLC-------EPCAVTISNEL-------ETPTFYQTLAGVTHLEESDIIELEKRYWVLKGESRTGKLDLDTLRPLVSPPVPLSVCTGVFAAFDENRDNHIDFKEMACGISAATRGPMAERQKFCFKVFDLDRDGLLSETEMDYMVDVLLHLH 303          
BLAST of mRNA_L-elsbetiae_contig190.5590.1 vs. uniprot
Match: A0A067QR02_ZOONE (Ubiquitinyl hydrolase 1 n=7 Tax=Blattodea TaxID=85823 RepID=A0A067QR02_ZOONE)

HSP 1 Score: 69.3 bits (168), Expect = 1.740e-8
Identity = 67/275 (24.36%), Postives = 122/275 (44.36%), Query Frame = 2
Query:  356 MPKILVESLFDAFGASRRGAVSLEEFVCAVAVMHRGTAPEQLRMLFEVYDIRRSTYIEVEHVRRLLDHVYGSPHSKAIDHALAWLFRVSSREDEMDAEEFIARLTPVVDYRGTAAAAQAEPLLQWFRVLCTRILEEPHPAVVALEQRYNPERDLNKVVTKYKLSPGLTDL-------LCRRHALICRRSSANALDVQEWLSVVGYLIPEALARRVFQSFAQSGGLAWTVADLIRFLCACVLDSRQEHVSMMFQLFDVDRDGLLSETEVAQMLEHL 1159
            +P  + E +F A G +++G + L++ +C + ++ RG   E+L+ LF +Y     +Y+    VR  L  +  +  +  +  ++A LF   S  D    EEF   LT         A   A  L +W       +L EP    ++ E          +  T Y+   G+T L       L +R+ L+  +S    LD+   + ++   +P ++   VF +F ++        ++   + A       E     F++FD+DRDG+LSE E+  M++ L
Sbjct:   56 VPTPVAEYIFSACGGTQKG-IGLKDLLCGLVLLTRGREEEKLKFLFGLYSNESGSYV----VREELQCMLQACENGYVPDSIASLF---SERDRASYEEFHDWLT---------AHPDATSLSRW-------LLSEPCTITLSNEL---------ETPTFYQTLAGVTHLEETDIMELEKRYWLLKGQSHTGKLDLDTLVPLISPPVPLSVCPGVFGAFDENRDSHIDFKEMACGISAACRGPLTERQKFCFKVFDIDRDGVLSEEELQHMIDVL 297          
BLAST of mRNA_L-elsbetiae_contig190.5590.1 vs. uniprot
Match: A0A812TTM2_9DINO (Calmodulin n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812TTM2_9DINO)

HSP 1 Score: 68.6 bits (166), Expect = 2.560e-8
Identity = 77/349 (22.06%), Postives = 151/349 (43.27%), Query Frame = 2
Query:  176 MGLTSSKTIIPIKEAEMKLGPVLRMKLDKAYHRITESGVGEARALDAKAFQRNFLEAFPLMPKILVESLFDAFGASRRGAVSLEEFVCAVAVMHRGTAPEQLRMLFEVYDIRRSTYIEVEHVRRLLDHVYGSPHSKAIDHALAWLFRVSSREDEMDAEEFIARLTPVVDYRGTAAAAQAE---PLLQWFRVLCTRI---------LEEPHPAVV------ALEQRYNPERDLNKVVTKYKLSPGLTDLLCRRHAL----ICRRSSANALDVQEWLSVVGYLIPEALARRVFQSFAQSGGLAWTVADLIRFLCACVLDSRQEHVSMMFQLFDV-DRDGL-LSETEVAQML 1150
            MG   S+ ++  +EA   LG     ++++ +HR++  G  E R  + +A   N     P+ P  L E+LF  F +   G +++++F+C VA++ RG   ++LR+LF VYD  R   +    +++    +       + + A+A     ++ ++ +D        +P V+Y      A+     PL+ W   L  R+         +++P P  +            + ERD  K +  +    G+   LC    +    +   S    +D   +L       P  L  R F++  +S     +V + I     C++ +  +   ++F++F     DGL +S +E A++L
Sbjct:    1 MGAGGSRQLLDYEEAVQLLGTEEVARIEEGFHRLSVRG--ELRPAEFRAGFLNSGAGDPV-PDALAEALFQCFDSDSTGTLTVQQFICGVAILCRGRPDQKLRLLFMVYDADRDQRLSDRDLQKFAKSLSDGRCHDSAEAAVA-----AALKELLDG-------SPAVNYEKFEQWARCNITSPLVDWIFGLEQRVSASALMDPAIDDPTPGHLWRMRPPVQRSMSSQERDELKQLLTWGDRVGVHKDLCLELRVAWQSVASTSQFGIVDRAAFLRTFPSA-PADLMGRFFENMDKSKSGTVSVHEWIEDWAVCLVGTESQRQDLLFRMFATRTSDGLAISNSEAAELL 333          
BLAST of mRNA_L-elsbetiae_contig190.5590.1 vs. uniprot
Match: A0A7D9DS77_PARCT (Ubiquitin carboxyl-terminal hydrolase 32 (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DS77_PARCT)

HSP 1 Score: 67.4 bits (163), Expect = 4.250e-8
Identity = 77/342 (22.51%), Postives = 149/342 (43.57%), Query Frame = 2
Query:  176 MGLTSSK-TIIPIKEAEMKLGPVLRMKLDKAYHRITESGVGEARALDAKAFQRNFL-EAFPLMPKILVESLFDAFGASRRGAVSLEEFVCAVAVMHRGTAPEQLRMLFEVYDIRRSTYIEVEHVRRLLDHVYGSPHSKAIDHALAWLFRVSSREDEMDAEEFIARLTPVVDYRGTAAAAQAEPLLQWFRVLCTRILEEPHPAVVALEQRYNPERDLNKVVTKYKLSP----------GLTDL----LCRRHALICRRSSANALDVQEWLSVVGYLIPEALARRVFQSFAQSGGLAWTVADLIRFLCACVLDSRQEHVSMMFQLFDVDRDGLLSETEVAQMLE 1153
            MGL  SK +  P +E + ++      +L  A+ RI     G +  +   +F R  L E+ P  PK L E +F AFG   +G +  ++ +C +A++ RG+  ++LR +FE+Y    +  ++ +    LL    G      +  ++  LF +S   D++ +++F                        W R          HP  + L  ++  ++     +T Y  +P          GL +L    L +R+  +   +     D++ ++ +V   + ++LA+ +F +F ++        ++   +  C      E  +  F++FDVDRDG LSE E+  M++
Sbjct:    1 MGLRESKISFFPYEEVQRRVNEDELKRLRLAFKRIA----GASGVMAKSSFFREVLGESVP--PK-LAEQMFIAFGGGSKG-IYFKDLLCGLALLTRGSLMDKLRFIFEIYSSDGNHVLQDDMESLLLASEGGK-----VPESIRQLFALS---DKVTSQDFC----------------------DWLR---------RHPDSITLS-KWLVKQGNGLQLTDYGETPTFYQTLAKFTGLQELDIIELEKRYWYLKSGTKTGKFDLETFMPLVSSCVSDSLAKALFNAFDENQDGHIDFREIACGISTCCRGPVAERFAFTFKIFDVDRDGRLSEDEIRTMIK 294          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig190.5590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5KLB3_9PHAE1.930e-20379.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR49_ECTSI1.050e-18872.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YVN1_9STRA1.250e-8346.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1C481_9STRA3.160e-2430.09Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2HM96_9DINO1.310e-936.04Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A6L2PZ56_COPFO3.380e-924.00Ubiquitinyl hydrolase 1 n=1 Tax=Coptotermes formos... [more]
A0A1B6M1M9_9HEMI1.710e-824.41Ubiquitinyl hydrolase 1 n=5 Tax=Cicadellinae TaxID... [more]
A0A067QR02_ZOONE1.740e-824.36Ubiquitinyl hydrolase 1 n=7 Tax=Blattodea TaxID=85... [more]
A0A812TTM2_9DINO2.560e-822.06Calmodulin n=1 Tax=Symbiodinium sp. CCMP2592 TaxID... [more]
A0A7D9DS77_PARCT4.250e-822.51Ubiquitin carboxyl-terminal hydrolase 32 (Fragment... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig190contigL-elsbetiae_contig190:10070..18830 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score593.6
Seed ortholog evalue9.3e-167
Seed eggNOG ortholog2880.D8LR49
KEGG koko:K11837
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquitinyl hydrolase activity
EggNOG OGsCOG5560@1,KOG1870@2759
EC3.4.19.12
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Exons9
Model size1777
Cds size1602
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig190.5590.1prot_L-elsbetiae_contig190.5590.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig190 10070..18655 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815790.133885-CDS-L-elsbetiae_contig190:10069..105621622815790.133885-CDS-L-elsbetiae_contig190:10069..10562Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 10070..10562 -
1691683104.388154-CDS-L-elsbetiae_contig190:10069..105621691683104.388154-CDS-L-elsbetiae_contig190:10069..10562Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 10070..10562 -
1622815790.145166-CDS-L-elsbetiae_contig190:11008..111991622815790.145166-CDS-L-elsbetiae_contig190:11008..11199Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 11009..11199 -
1691683104.3997388-CDS-L-elsbetiae_contig190:11008..111991691683104.3997388-CDS-L-elsbetiae_contig190:11008..11199Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 11009..11199 -
1622815790.15672-CDS-L-elsbetiae_contig190:11627..117951622815790.15672-CDS-L-elsbetiae_contig190:11627..11795Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 11628..11795 -
1691683104.4123003-CDS-L-elsbetiae_contig190:11627..117951691683104.4123003-CDS-L-elsbetiae_contig190:11627..11795Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 11628..11795 -
1622815790.1677973-CDS-L-elsbetiae_contig190:12439..125411622815790.1677973-CDS-L-elsbetiae_contig190:12439..12541Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 12440..12541 -
1691683104.4233193-CDS-L-elsbetiae_contig190:12439..125411691683104.4233193-CDS-L-elsbetiae_contig190:12439..12541Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 12440..12541 -
1622815790.1857939-CDS-L-elsbetiae_contig190:13552..137511622815790.1857939-CDS-L-elsbetiae_contig190:13552..13751Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 13553..13751 -
1691683104.4349325-CDS-L-elsbetiae_contig190:13552..137511691683104.4349325-CDS-L-elsbetiae_contig190:13552..13751Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 13553..13751 -
1622815790.1961112-CDS-L-elsbetiae_contig190:14237..143651622815790.1961112-CDS-L-elsbetiae_contig190:14237..14365Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 14238..14365 -
1691683104.4474506-CDS-L-elsbetiae_contig190:14237..143651691683104.4474506-CDS-L-elsbetiae_contig190:14237..14365Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 14238..14365 -
1622815790.2083464-CDS-L-elsbetiae_contig190:15229..153671622815790.2083464-CDS-L-elsbetiae_contig190:15229..15367Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 15230..15367 -
1691683104.4580126-CDS-L-elsbetiae_contig190:15229..153671691683104.4580126-CDS-L-elsbetiae_contig190:15229..15367Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 15230..15367 -
1622815790.2207317-CDS-L-elsbetiae_contig190:16023..161191622815790.2207317-CDS-L-elsbetiae_contig190:16023..16119Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 16024..16119 -
1691683104.4681373-CDS-L-elsbetiae_contig190:16023..161191691683104.4681373-CDS-L-elsbetiae_contig190:16023..16119Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 16024..16119 -
1622815790.234649-CDS-L-elsbetiae_contig190:18568..186551622815790.234649-CDS-L-elsbetiae_contig190:18568..18655Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 18569..18655 -
1691683104.478231-CDS-L-elsbetiae_contig190:18568..186551691683104.478231-CDS-L-elsbetiae_contig190:18568..18655Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig190 18569..18655 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815790.2513947-UTR-L-elsbetiae_contig190:18655..188301622815790.2513947-UTR-L-elsbetiae_contig190:18655..18830Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig190 18656..18830 -
1691683104.487715-UTR-L-elsbetiae_contig190:18655..188301691683104.487715-UTR-L-elsbetiae_contig190:18655..18830Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig190 18656..18830 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig190.5590.1

>prot_L-elsbetiae_contig190.5590.1 ID=prot_L-elsbetiae_contig190.5590.1|Name=mRNA_L-elsbetiae_contig190.5590.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=534bp
MGLTSSKTIIPIKEAEMKLGPVLRMKLDKAYHRITESGVGEARALDAKAF
QRNFLEAFPLMPKILVESLFDAFGASRRGAVSLEEFVCAVAVMHRGTAPE
QLRMLFEVYDIRRSTYIEVEHVRRLLDHVYGSPHSKAIDHALAWLFRVSS
REDEMDAEEFIARLTPVVDYRGTAAAAQAEPLLQWFRVLCTRILEEPHPA
VVALEQRYNPERDLNKVVTKYKLSPGLTDLLCRRHALICRRSSANALDVQ
EWLSVVGYLIPEALARRVFQSFAQSGGLAWTVADLIRFLCACVLDSRQEH
VSMMFQLFDVDRDGLLSETEVAQMLEHLAAYHAHRASGVGVGGVGGGVGG
GGGAGSSHHHQAQHNRGQHRHHHHHHHHHHPDMAKLTLGLRKLGYEDLES
IAVLDKQHVTNATNTSNTRDSGSAGGSGVEVGESSSSGGGGGGGGNDDGG
STTKVVARRLLREMRATSERYVAVPAASAASAAAAAAAAAADAGTGVSAT
NHGGGGSSRSDSGSVERSKQKEHSSSGSGGSSMR
back to top

mRNA from alignment at L-elsbetiae_contig190:10070..18830-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig190.5590.1 ID=mRNA_L-elsbetiae_contig190.5590.1|Name=mRNA_L-elsbetiae_contig190.5590.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8761bp|location=Sequence derived from alignment at L-elsbetiae_contig190:10070..18830- (Laminarionema elsbetiae ELsaHSoW15)
GAGGCAACGGTCTAGTGGGCACAAGGATAAGGCAAACATTCGCTTTGCTG AGCGTGTGTCTTAGCTAGCCGCCCATCCGAAGTTGCTCTGACGAGGAAGG GTTGCCAAGGTGCGAGGATCTTGTTTGTTGCATCTCGCGGGCCTCTCGAC TGCCTTGTCTGGGCCGGCGGGAAGTATGGGACTCACGAGCTCGAAGACGA TCATACCCATCAAGGAGGCTGAGATGAAGCTTGGTCCGGTCTTGCGGATG AAACTGGATAAGGTGCGGGTGCATAGAGGTTTGTTTAAGAGGGTGCAGTT TGTTTTATTGCGCAGAGCTGTCTCTCCTCTACTTCTACTGCACGCCGACC TTCTGCATCTCAGACTACTTCAAAACAGAGCCTCCACGCTGCGAGAGATG AAGAGATAAGGCAGCACGAGAAAGGTCCAACAGCGGCGGGCGTTTATGGC ACATGCCCCGTTTGCATTGTTGTCGCTGTTTTTCAGGCACACAAACAGCA GCAGTGTTGTCCGTTTTTCTTATGTACCCGCGTCCACACTTCACAGCAGT GCTCCATTGGTGTCCTGCTTTGCTCTTCAAACACTACACAACACGGTGCA CGTATGCGCAACCGGAATGAGCACGGTTACCAAAAAAGCGGGGCGGGTAG AAACCACTAGCTATTTTCCCGTTGAACTTATGTAGGCCTCTTCAGACGTC ATGGGTCGAATATATTTGCCGGTATGCCGGTGGTATATGCACGCACATGG CCCGTTTCTTTGATGATTCCTCCGCCAATTTCTCGACAGACTAACGGGTG GACTTACGTACATGGATCGTTGCCCGCGGGTGTGTGTCCCTATCGCGACC CCGAACGCCCTCTGACTAGTCCCAGAGAAGAGGGGCGTCCTTCCCGTGCG CTCTGTGTGCGGTTTCCTTTTATTAAGGCACAAAGATTCCAGAACCTGCC ATTATTTTACAGTTTAAATAGATCTGTCTAAAAAATAATATTCCAATCGA CCAACGAGGAGACCCCGCACCGTCTGCCGAACAGGCGACCAGGGCACACA ACCGGCCTCATGTGTGGCGTGGTTTAGGATTTGCGGCTTTTCCGGACAAA CCTATAGAACGGACCTTCAGTCTGCATTCCAGTACAATAGTGTGCTATGT TATGGTAACCGACGCGGCGCTTTTGGGTCGCCTGTGCGATGAGTTTGTTT TGTTTGCAGTCCATATGCACAAAGATGAGAGAGGTATCGTAGCCGTCAGC GAGTACTTTTCATTTGTTTATTTTCGTATGTCGATGAGCACACCAGGGAA TTAATGCCAAACGATCAGCATTCACAGTAGTGAAAGTACTGAGAGGGAGG GCTTGGGTTGAGGGTTTCCCCTACCAAAAATGGCCCCTTTACCCACTCTC GGCTGATCGTGTAATCCTCGAGTCTTTAACTTGTGTTGTTGGGGCTTTGC GGCCTCCTCTACTCTTGGTGTGTCTCCGTTGCTCGTTGCTTTAGCATTCC ACTTGCGTCGAGTTGTATGCTGGAGGAGATGTTGCGGTTGGGCAGTTGCA GGCTGGGGGGACCGTGTAGATATATTTGGTTCCGGAAGGTACCGATCGTG TAGGGTGTCCTGTGTGACGGCCGCCTAGGCCTGCCCTCTCTGCCTGTCCT TGTTCACCTCTCTTTCTGAGCAGCAAGCAACAGACAACTTTTACCATCAA TTCTGCTTGTGAACGTTCTCTTCGACCACAAGTTACCGGACTTGTGTATA CTCCACACCGGAGTCTTACTGCGAACTCGGTATAGATCGCGCTACATACC TCAGAAATGAGATCCTTCCGCCCCCCGGTACACCTCTCACGGCCTTTCAG GGATTACACGCATGTCTACATCCCCAAGGATTTGCCCTTGCACGGTCTAC TTCATCCTACATAGGAGAACGCATTTGACATACACACACACAAAGCTCTC GACCCCGCGGTACCTACGCTTTCGAGCCCGTGTCTTCCTCTCCCGAGCCC GGGAGGAGTATACCGAAGGTGACACAAGATACCACACCCCCTGGACATAT TTTCAAAGCTCGATTCCTCCCCAGCAAGAAAAATGCCAGTGCCCAAAGGG GTGGCGTTGGGAAGATCTAGTCGAGGGCTGTCCGGAAATGTGCCGTTTGG TGATGGCACCCTCTTCGTTACCGAGTAATGGAGCTCTCAAATTCGATCCA GGGGGTGTGGTATCCTGTGTCACCTACGGTAGGCAAGAGGTGTATAAGCA AAACAGCAATGGGCGTCGAGAGCGCGCGAAAATATGTATGTACCTGCGCA TCTGGGTTCGGGGTAGCTTACATAACATCCCTCTTCGAGACCCTGGGTAT AGTATTCATATGCAGTCTTGTGTTATCCGTGCCGGGCCGGTTATAGGTGT GTGAAACAGATTGTCTTTGCACGCTAAACGTGTGCCTTCCGTTGCGCTTG TTGCATGTTGGACCGCCTACGCCGGCAATTAAGCTTAGCTAGGAAAATAC TCCTAACCCTAACCCTAACCCTAACCCCAACCACCGATCCCCCTTTCCCG GTTTCCATACTCTATCTCATATGTTATCTCATATGTTAGCTGAAGATGAA AAGATGAAACCTGCGTAGACTACTACTGTGCATGTTTCTCTTCTTGCCGC CTCTTTGCCCTCGCGCTGACGACTCCGCGGCTCTGCTCTTGGCCGCACCG GTGCCACACAGGCGTACCACCGCATCACGGAGAGCGGCGTCGGCGAGGCG AGGGCGCTGGACGCCAAGGCGTTCCAGAGGAACTTCCTGGAAGCGTTTCC GTTGATGGTGCGTGCCTGATCTGCTTGCTGCTGTGGCGCCGCTCGTGTGG TTGTTTTAAGGCTGGGGCATGTGTGCAGTCTGTGTCTTGTCTATGTGTGT GTGTTATTCCACGGCTGGTGTTTCTGATCTGAGCTGTTCTACCCTGATCT ACGTATGTATATATATAGGCTATATCCACGAGAATCGATCTGTTGTGGCG CCCGGGTACATGTGCCAAAGTGCGGAGGAATTCGTCCGACGAAACCCCCC ACCTTAAACCCCACCCCCCCCCCCCCCCCCCCGCTTGCGGCGCCCCACCA CACAACCCCAACCGAGCGGGAGTCCTTGCCCCGCCCCCCCCCCCATACCC CCCCCCCCCCCCCCCCCCGCGTTTCCGTTTCCGGTCTAGCCAAACGCCGC CTCCCCCATGGCCCGACTTTCCCACCATCCAACCGTCCTGTAAGCAGTTG CTCAAGTCCATTCTATGCGATGCGATGTCCCGCTCGTTACCATCCCCACG CGATGCCCATGCGCATCCGCATCCGCACGACAACAAACATACATTTGATT ACAATACGTATGCGCTCGCATTCTTCTCTCTTTCGCCCGCTCTGCCCGAC CCTCTCCCCCGTTGGTCGGGGTCTGTTTCTTCCCCCGCGACGCACCGACA CCCGCGTCCCCAGCCAAAGATCCTGGTGGAATCCCTTTTCGACGCCTTCG GGGCATCCCGCCGAGGGGCTGTGTCTCTGGAGGAGTTCGTATGTGCCGTG GCGGTGATGCACAGGGGTACCGCACCCGAGCAGCTCCGCATGCTTTTTGA GGTGCGATGGTGATGTGCAGGGTGGAACCGGGGGTTGCTTGCTTTGGCGG ACTGTTTGTATGGAGGCGTGTGTTTCTGTGGGGGCTTGCGTGCGTGCGCC CACTGTGGCATGATGGCATGATTTTTTATGATCATTCGCCCTCTTTTGCC CCTTTGGAGCCGTTTCGGCTTCGGGTCGGAGAACACCGCCGTGGTCTTTT CTCTCTTGGTTTTGATCGCGCTGATCGTTCAAGCGGTTGGCGAGAGCAAC CGCAGCAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTGTGGTGGGGATTA GTACAAAAGGAATCCATCAGTGCGCGTACGAGTCGTGCTCAAGCAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCAGCGTGGTGGGAATTAGTGCAAGAGG AATCAGTGCGCGCACGAGCCGTGCTTACGATCAGCACCGTAGGCGTATAT AGAGCCAAAATCACTTGATTTTGTCAGAGGAGCATCTTTGTTCAATCGGC TCTCGCTGTTACAGCTATCTTGCCGTTTCCGCACATGCATGAATATACCA GCAGCTTCCCAGCGGCCACCGAGTATCGTGATTTTTTTTCTGCGATAACG GTGCTCTCTGATCCGATGCACCGTAGTATGTAACGTGTCTATACCTTTTT TTTTCCTTTTTTTTTTTTCGGGGGGGGGGGGGGGTACCAACATCGCGGTG CAAGCCCCCCACGGCGAAACCACCCGGAGGGCGGACCCAGGGATGGAGGG CGCCNNNNNNNNNNTCTCTTTTTTCCTTCTCCCCCCCCGGGTTTGTTGTT GCATCTTTTTCCCTTTGGCTTCCGTGTTTGGGTGGTGGGGGGGGGGGGGG GGGCACAACCAACAGGTGTACGACATCCGGCGATCGACGTACATCGAGGT AGAGCACGTGAGAAGGCTGCTCGACCACGTCTACGGCTCGCCGCACTCCA AGGCCATCGATCATGCATTGGCCTGGCTCTTCCGGGTGTCCAGGTAAGCA AAACATGGAAAACGAGGGGGGTGGGTTGGTGGGTGGGTGGGAGAAAGGCC TGTTTAGTCAAGAGGAAACCCACCAATTTTGCATGGACATACGTACGTTC ATACGTTCGTAGCCGAAAGTAGCTGGCTGAGAGAACGGGAATCGCGTGTG TCCGGGGGGTCTGTCTGTCTGTTACTGTTAATTTCGGGGGTTCAAGGATA TCCATCATTTCAGACACCACACCCCTTCTCGATCACAGTTGCCCTCGTGT GCCCCGTTTCGTTATTCACCGCAATCCACGGCCTCTAATACACACACACA CACACGCACCAGCAAACCATATAAATCCTGTTGTTCCGTGCGCTTGCCTT GCTTCGTCTTTGTCCTCCTTCCCTTCACGCGGTGGTGATGTTTCCGGCCG GCGGCCACCGCCACGGCCACCGCCACCGCCACCGCCGCCGCTGCCACCTA TACCCCCTACGTAACCGTTTTTTTCTCAGCCGCGAGGACGAGATGGATGC GGAGGAATTTATCGCCAGGCTGACGCCCGTCGTTGACTACAGGGGCACCG CGGCTGCAGCACAGGCCGAGCCCCTCCTGCAGTGGTTCCGCGTGCTGTGC ACCCGGATACTGGAGGAGCCGCACCCGGCGGTCGTGGCCCTGGAGCAGAG GTACAACCCGGAGAGGGACCTGAACAAGGTAGGGGGGGGGGGGCGACGTG ACTGGCCGGCGGGCCCGGGGAGAAGGGGAGGGGGCGAGCGTGTGGATGTG CTACAAGTGAAAAATGTGTGTTTGGAGGGGGGGGGGGGGGGGGGGCGTTC TGTCCCGGGGTTTGTAAGTAGGTTGGCGGGATTGTGTGCGTGCCGTGCTG GAGGGCGGTGGGGGGGTGACTGCAGCGGGGGGACCAGATTTTGTGAGATG TGCCACACAACGTGGATGGCTGTGAGTCTTGTAATGTGGGTTCCGCGTCG GACGATGCGCCTGCCGTTTGTTGCTGTCGTTGTGGTTTCTTCACATTTAA AACCGTTCCGATCTCTCCACCCAGTGCCTCCCTGTGTCCGTCCTTCTTCC GATACTTGATGCGGTCAATTCCCGTGGTCACAGGCTAACTCATACCTAAA AAAGGTATACTTCGAAGTACGATAATATAATGGGCCCGAAGGGTCAGCAA AGCGTGTGTGCAACTAGGAACTGTTTATTATGTAGCAGCGGGACGGAGAG GAGGGAGGGGGGAAGGAAGGAGGGGAGAGGAGCGAGCCAGAGGGCGAAGA GGAGAAAACAAGAGTGGGATGGAAGGGCTGGTTTAAAGCAAGAGGATGGA AGTGCGGGTTTGGGCTTGATTCCCGAACGATACGGGTGGCGTGGCGTATT TAGAGGGAAAGATAAGGCGTTGGTTGTTGCTTGGTCGTCCGGCAGCGATC TCCCCTCTCCCACCAGCGGTCGCCTAGTGCTCACCGCCTTTGTTTTTCTC CGCCTTCTTCCCTACCCCCCTCCTCCTCCGCCGCTTGTCTTCGCCCCGGA CTCGCCGACCCCGGCCCTCCTTCTCCCTCTCTCTTTTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTTTCTCTCTC AACCTCAACCTCAATCTCAATCTCAACCTCTCTCTCTCTCTTGTCTCTCT TTTGGCGATGATCGAACGCGTTGGCTCGATGACGAACAGGTCGTGACCAA GTATAAGCTGTCGCCGGGACTGACGGATCTCCTGTGTCGACGGCACGCCC TCATCTGCAGGCGGAGCTCGGCGAACGCGCTCGACGTGCAGGTAGACGGC ACTAGAGGGGGCTTGTGGGGGCGAGAGGGGCGAGGCGAGGCATGCATGCA TGCCTGCGACAGAACGGAATACACAAGGGGCACTACTATTATACTATGAA CGTGTAAAGCCTCAAGTAGCCCAGGGGTGCAGTAGAAAGCAGAGGAGAGG GGTGAGAGAAAAGGCTGTGCGGTGCTGCGTTTGTAGTTAAAACGTTTTTG TAGATTTATTTCCTGTTGCCGCGGAGGGCATGGGAGCGGGTTGCAAGGGC AGGGAGGAGGGAGAGAGTCTCGTGTGGGTGTGGTTGGTGAAGAAATAATC TGAAGAACCTTGCGAGCGTGCACGCGCGTGCACAGCGTTATTCAGCGACA CGTGAGTGGGGATGCGGGAAAAGCGCAGCAAGATCCAAGGCGGTATCACC CCGTTGCGGTACAACAGCTGGTCTTTGGAAAGCACACGTGCGTGCGGGTG GGTGCTTCAGATGTCGCACCTGTATTTCCCCGAGAGCCATCGTTGCCCAT CCACCAGCACTACAATATAAACGGGCCCAACCAATCGCTTACCTACTCCT ATCCGCAGCCCCCCCCCCCCCCCGTACCCGACTCATGCTGTTGTCGTTGT CGTTATTTTATTGCGCATCTACTTGGTTCTTGAAGGAGTGGCTGTCCGTC GTGGGGTACCTTATCCCGGAGGCCCTAGCCCGACGGGTGTTCCAGTCGTT CGCGCAGTCGGGGGGGCTGGCGTGGACGGTGGCGGACCTGATCAGGTTTC TCTGCGCGTGCGTGCTGGACTCGCGGCAGGAGCACGTCTCCATGATGTTT CAGGTGAGAGCTTACATTCACCGTGTTCTTTGTGGTGGATATAATAGCTG AACGCTCTGACTGAGAGAGCTGCTGCAAGGTAAGTTGCTGCAGTTGCTGG TGCTTCTGCTGCTGGTGCTGCTTCTGCTGCTGCCGCCGGCGCTGTGTTGA ACGCGTGGAGGCCGTAGGGCTTCGTTTTGTTGAGGCCGCGCACCGTCGTG TGCTTTGATGTTTTCGGGACTTACCTTCTCTATCCCGTCGCATGTGTCCC CTTCTCCCCCTGTGTCGTGGCTGCCCCCCCCCCCGCGTTCACCCGTCGTT CGGCCTCTCTTATTCCCTCGTGGGCGAACGGCGACCTTACTCTCCGGACG CCGACACACAAAAACGAAACATGCAACTGCTCGCACGCGCGCGCGCGCAC ACCGAAATACGGAAATACGCAACATCGCCAGCTGTTCGATGTGGATCGCG ACGGTCTGCTGTCCGAGACGGAGGTTGCGCAGATGCTGGAGCACCTGGCC GCGTATCACGCGCACCGAGCGAGCGGCGTTGGCGTTGGCGGCGTTGGCGG CGGCGTTGGCGGCGGCGGCGGTGCTGGGTCGTCGCACCACCACCAAGCGC AGCACAACCGCGGGCAGCACAGGTATGATGTAGGCACGGCACGACGTGTT CAGTACTTCGGTATAGGTGTATTTATTGTGCGATTCAGGTCATTCTGCGC AGACTGTTTTTTTTCTTCACTCAATGCGGGCCCGGGGCTTGTTATTTTCT CACTTGCATCCGCGGCCACGGAAGTGCATAATAAGTAAACGCTGCCATGC CTAATGGTTCGTACTACTATGTGCGTTTTTTCTGCTGCTTCTTCTCGAGC CGACCTGGGCATCAAAGTCTATGTATGCATACTGTGGTTTCACCTACTCC TGAACAATCGCCACGACTTGTCGCCTGCTTTCTCCCTCCCGGGGTATCTA ATCCTAACCCTAACAACCCATACTGCGGTTTCACCTACTCCTGAACAATC GCCACGACTTGTCGCCCGCTTTCTCCCTCCCGGGGTTATCTCTGGTGCCG TGTTGTTCCATGTAGCAGACATCACCATCACCACCACCATCATCATCACC CAGATATGGCTAAGCTTACCCTCGGCCTCCGAAAGCTTGGCTACGAGGAC CTGGAAAGCATCGCTGTCCTCGACAAGCAGCACGTAACTAACGCTACGAA CACCAGCAACACTAGAGATAGTGGTAGCGCCGGTGGCAGCGGAGTTGAAG TTGGCGAGAGTAGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCAACGAT GACGGCGGTAGCACCACCAAGGTGGTAGCCCGCCGGCTTCTGAGAGAAAT GCGGGCCACCTCTGAGAGATACGTAGCTGTGCCGGCGGCGTCGGCGGCAT CGGCGGCGGCGGCTGCTGCTGCGGCTGCTGCTGACGCTGGCACCGGGGTA TCTGCGACGAACCACGGCGGCGGCGGCAGCAGCCGCAGCGACAGCGGGTC CGTGGAGAGGAGCAAGCAAAAGGAACACAGCAGCAGTGGCAGCGGCGGCA GCAGTATGCGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig190:10070..18830-

>mRNA_L-elsbetiae_contig190.5590.1 ID=mRNA_L-elsbetiae_contig190.5590.1|Name=mRNA_L-elsbetiae_contig190.5590.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3204bp|location=Sequence derived from alignment at L-elsbetiae_contig190:10070..18830- (Laminarionema elsbetiae ELsaHSoW15)
ATGGGACTCACGAGCTCGAAGACGATCATACCCATCAAGGAGGCTGAGAT
GAAGCTTGGTCCGGTCTTGCGGATGAAACTGGATAAGATGGGACTCACGA
GCTCGAAGACGATCATACCCATCAAGGAGGCTGAGATGAAGCTTGGTCCG
GTCTTGCGGATGAAACTGGATAAGGCGTACCACCGCATCACGGAGAGCGG
CGTCGGCGAGGCGAGGGCGCTGGACGCCAAGGCGTTCCAGAGGAACTTCC
TGGAAGCGTTTCCGTTGATGGCGTACCACCGCATCACGGAGAGCGGCGTC
GGCGAGGCGAGGGCGCTGGACGCCAAGGCGTTCCAGAGGAACTTCCTGGA
AGCGTTTCCGTTGATGCCAAAGATCCTGGTGGAATCCCTTTTCGACGCCT
TCGGGGCATCCCGCCGAGGGGCTGTGTCTCTGGAGGAGTTCGTATGTGCC
GTGGCGGTGATGCACAGGGGTACCGCACCCGAGCAGCTCCGCATGCTTTT
TGAGCCAAAGATCCTGGTGGAATCCCTTTTCGACGCCTTCGGGGCATCCC
GCCGAGGGGCTGTGTCTCTGGAGGAGTTCGTATGTGCCGTGGCGGTGATG
CACAGGGGTACCGCACCCGAGCAGCTCCGCATGCTTTTTGAGGTGTACGA
CATCCGGCGATCGACGTACATCGAGGTAGAGCACGTGAGAAGGCTGCTCG
ACCACGTCTACGGCTCGCCGCACTCCAAGGCCATCGATCATGCATTGGCC
TGGCTCTTCCGGGTGTCCAGGTGTACGACATCCGGCGATCGACGTACATC
GAGGTAGAGCACGTGAGAAGGCTGCTCGACCACGTCTACGGCTCGCCGCA
CTCCAAGGCCATCGATCATGCATTGGCCTGGCTCTTCCGGGTGTCCAGCC
GCGAGGACGAGATGGATGCGGAGGAATTTATCGCCAGGCTGACGCCCGTC
GTTGACTACAGGGGCACCGCGGCTGCAGCACAGGCCGAGCCCCTCCTGCA
GTGGTTCCGCGTGCTGTGCACCCGGATACTGGAGGAGCCGCACCCGGCGG
TCGTGGCCCTGGAGCAGAGGTACAACCCGGAGAGGGACCTGAACAAGCCG
CGAGGACGAGATGGATGCGGAGGAATTTATCGCCAGGCTGACGCCCGTCG
TTGACTACAGGGGCACCGCGGCTGCAGCACAGGCCGAGCCCCTCCTGCAG
TGGTTCCGCGTGCTGTGCACCCGGATACTGGAGGAGCCGCACCCGGCGGT
CGTGGCCCTGGAGCAGAGGTACAACCCGGAGAGGGACCTGAACAAGGTCG
TGACCAAGTATAAGCTGTCGCCGGGACTGACGGATCTCCTGTGTCGACGG
CACGCCCTCATCTGCAGGCGGAGCTCGGCGAACGCGCTCGACGTGCAGGT
CGTGACCAAGTATAAGCTGTCGCCGGGACTGACGGATCTCCTGTGTCGAC
GGCACGCCCTCATCTGCAGGCGGAGCTCGGCGAACGCGCTCGACGTGCAG
GAGTGGCTGTCCGTCGTGGGGTACCTTATCCCGGAGGCCCTAGCCCGACG
GGTGTTCCAGTCGTTCGCGCAGTCGGGGGGGCTGGCGTGGACGGTGGCGG
ACCTGATCAGGTTTCTCTGCGCGTGCGTGCTGGACTCGCGGCAGGAGCAC
GTCTCCATGATGTTTCAGGAGTGGCTGTCCGTCGTGGGGTACCTTATCCC
GGAGGCCCTAGCCCGACGGGTGTTCCAGTCGTTCGCGCAGTCGGGGGGGC
TGGCGTGGACGGTGGCGGACCTGATCAGGTTTCTCTGCGCGTGCGTGCTG
GACTCGCGGCAGGAGCACGTCTCCATGATGTTTCAGCTGTTCGATGTGGA
TCGCGACGGTCTGCTGTCCGAGACGGAGGTTGCGCAGATGCTGGAGCACC
TGGCCGCGTATCACGCGCACCGAGCGAGCGGCGTTGGCGTTGGCGGCGTT
GGCGGCGGCGTTGGCGGCGGCGGCGGTGCTGGGTCGTCGCACCACCACCA
AGCGCAGCACAACCGCGGGCAGCACAGCTGTTCGATGTGGATCGCGACGG
TCTGCTGTCCGAGACGGAGGTTGCGCAGATGCTGGAGCACCTGGCCGCGT
ATCACGCGCACCGAGCGAGCGGCGTTGGCGTTGGCGGCGTTGGCGGCGGC
GTTGGCGGCGGCGGCGGTGCTGGGTCGTCGCACCACCACCAAGCGCAGCA
CAACCGCGGGCAGCACAGACATCACCATCACCACCACCATCATCATCACC
CAGATATGGCTAAGCTTACCCTCGGCCTCCGAAAGCTTGGCTACGAGGAC
CTGGAAAGCATCGCTGTCCTCGACAAGCAGCACGTAACTAACGCTACGAA
CACCAGCAACACTAGAGATAGTGGTAGCGCCGGTGGCAGCGGAGTTGAAG
TTGGCGAGAGTAGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCAACGAT
GACGGCGGTAGCACCACCAAGGTGGTAGCCCGCCGGCTTCTGAGAGAAAT
GCGGGCCACCTCTGAGAGATACGTAGCTGTGCCGGCGGCGTCGGCGGCAT
CGGCGGCGGCGGCTGCTGCTGCGGCTGCTGCTGACGCTGGCACCGGGGTA
TCTGCGACGAACCACGGCGGCGGCGGCAGCAGCCGCAGCGACAGCGGGTC
CGTGGAGAGGAGCAAGCAAAAGGAACACAGCAGCAGTGGCAGCGGCGGCA
GCAGTATGCGCACATCACCATCACCACCACCATCATCATCACCCAGATAT
GGCTAAGCTTACCCTCGGCCTCCGAAAGCTTGGCTACGAGGACCTGGAAA
GCATCGCTGTCCTCGACAAGCAGCACGTAACTAACGCTACGAACACCAGC
AACACTAGAGATAGTGGTAGCGCCGGTGGCAGCGGAGTTGAAGTTGGCGA
GAGTAGCAGCAGCGGCGGCGGCGGCGGCGGCGGCGGCAACGATGACGGCG
GTAGCACCACCAAGGTGGTAGCCCGCCGGCTTCTGAGAGAAATGCGGGCC
ACCTCTGAGAGATACGTAGCTGTGCCGGCGGCGTCGGCGGCATCGGCGGC
GGCGGCTGCTGCTGCGGCTGCTGCTGACGCTGGCACCGGGGTATCTGCGA
CGAACCACGGCGGCGGCGGCAGCAGCCGCAGCGACAGCGGGTCCGTGGAG
AGGAGCAAGCAAAAGGAACACAGCAGCAGTGGCAGCGGCGGCAGCAGTAT
GCGC
back to top