prot_L-elsbetiae_contig18991.5580.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig18991.5580.1
Unique Nameprot_L-elsbetiae_contig18991.5580.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length165
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig18991.5580.1 vs. uniprot
Match: D8LEF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEF4_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 6.210e-5
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 0 
Query:    1 ELTSARDGGSGGLSGGDTTPAESSVLDRTGNSNGRLSLRELRSADEARRFYADERSRARADTA 63
            EL  AR G SG  + GDT     SVL+RT  S+GRLSLRELRSAD++R  Y+DER+R R D A
Sbjct:  107 ELLPARAGVSGIFAEGDT-----SVLERTRYSDGRLSLRELRSADKSRTHYSDERARPRPDDA 164
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18991.5580.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEF4_ECTSI6.210e-558.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18991contigL-elsbetiae_contig18991:1144..2137 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18991.5580.1mRNA_L-elsbetiae_contig18991.5580.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig18991 1143..2137 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig18991.5580.1 ID=prot_L-elsbetiae_contig18991.5580.1|Name=mRNA_L-elsbetiae_contig18991.5580.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=165bp
ELTSARDGGSGGLSGGDTTPAESSVLDRTGNSNGRLSLRELRSADEARRF
YADERSRARADTAVAPSDHHDAASAAAAAAAGGTRASNERAPASTRSSKS
RSGGNSSSSSSSSKSRSGSGNRRGHRRARNGGRAASSDERWVARVAAAGG
GASAGRRGGDAPRGA
back to top