prot_L-elsbetiae_contig1895.5566.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1895.5566.1
Unique Nameprot_L-elsbetiae_contig1895.5566.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length278
Homology
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BLAST of mRNA_L-elsbetiae_contig1895.5566.1 vs. uniprot
Match: D7FTH3_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTH3_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 6.890e-6
Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 0 
Query:    1 MLDVMSKRCTHHGCTKHPSYGTVGGKA-ECCRDHTKDGMVN 40
            M+D++SKRC H GC KHPS+G  G K  E C  H+++GMVN
Sbjct:    1 MIDLVSKRCGHPGCMKHPSHGKDGSKRPEICAQHSQEGMVN 41
[Close]
BLAST of mRNA_L-elsbetiae_contig1895.5566.1 vs. uniprot
Match: D8LMB1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB1_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 1.030e-5
Identity = 20/38 (52.63%), Postives = 30/38 (78.95%), Query Frame = 0 
Query:   97 MADVKNKRCASPGCTKQPSYGEENTGTRKFCARHAEEG 134
            M DV N+RC  PGCTK+PS+G++ +  ++FCA+HA +G
Sbjct:    1 MVDVVNRRCRHPGCTKRPSFGQDGSKKQEFCAQHAHQG 38
[Close]
BLAST of mRNA_L-elsbetiae_contig1895.5566.1 vs. uniprot
Match: D7FUJ6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ6_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 1.130e-5
Identity = 25/40 (62.50%), Postives = 27/40 (67.50%), Query Frame = 0 
Query:    1 MLDVMSKRCTHHGCTKHPSYGTVGGK-AECCRDHTKDGMV 39
            M+DV+SKRC H GCTK PSYG  G K AE C  H   GMV
Sbjct:    1 MVDVVSKRCGHPGCTKRPSYGNDGSKKAELCAQHALQGMV 40
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1895.5566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FTH3_ECTSI6.890e-656.10EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LMB1_ECTSI1.030e-552.63EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FUJ6_ECTSI1.130e-562.50EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1895contigL-elsbetiae_contig1895:19422..20967 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1895.5566.1mRNA_L-elsbetiae_contig1895.5566.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1895 19422..21011 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1895.5566.1 ID=prot_L-elsbetiae_contig1895.5566.1|Name=mRNA_L-elsbetiae_contig1895.5566.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=278bp
MLDVMSKRCTHHGCTKHPSYGTVGGKAECCRDHTKDGMVNVVSKRCTHHG
CTKIPSYGKAGGKAEYCRDHASCTKRPSYGTAGGKVEYCRDHAEDGMADV
KNKRCASPGCTKQPSYGEENTGTRKFCARHAEEGTILLSGRSRGDSKKSG
RDDAGARDSGTASRAGSGETRSSPASAPTPVEPSSRGSRESNERARRGAC
AGHLRPVRVKREGADNRVLGDENSAACPESDTAALKTEDMEVPSKVEPAE
AAGRAIVARTRRRKTAGGAGARLLTSR*
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