mRNA_L-elsbetiae_contig1894.5564.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1894.5564.1 vs. uniprot
Match: D7G2E9_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E9_ECTSI) HSP 1 Score: 566 bits (1459), Expect = 4.710e-184 Identity = 302/422 (71.56%), Postives = 356/422 (84.36%), Query Frame = 3 Query: 108 AETIEGLRKALSAE-RGVQDKLHPGQRDEKHGEGSWSLTAVLGRRLRSFRRRFNGMRDLVEAAAGNHPEIRPEEAADRLKTLLDNNQKELRRQVANANGLLAKWAAQASAEERRLEARLSEMRDAQRAILSDVVTTAEARLQRAALEAQIDAVRRDWSDRQAVLRDQLGKRQQDIAQKMRAVTSDSKILAKIYDEFLMRQRKEMHTTNANEDTFRRALELILEDTEEGGWERVVSSKKGSLSVQRKFIGRNSGGSKFACIRAWCTMEVPAEAIAELFESSERVKEYNKWFLEGQDLELLDDDTKVVWASSPAPLPFVKPRDFVTVVNVRRLGDGSIVVVNRGYRHPAAPPSNDYVRGEVILAANVIKPDSKSRNRTHFTMLTQVDPGGIAPAWIVNQISARDPVDFLQRVEAAAGRSGAATK 1370 AET EGLR+AL AE R VQ D + G W +GRR S +G+RD+VEAAAGN PEI EEAA+RL+ +L+ NQ+EL VA ANGLLAKWAAQA+AEERRLEARLS+MR+ Q A +S+VVTTAE L+RAAL+ QI VR +W +RQAVLR+QL +RQQDIA++MRAVT DSKI+AK+YDEFLM ++ ++ T+ ANED+FRRALELILEDTEEGGWERVVS++ G+LSV+RKFIG+NSGGSKFACIRAWC+M+VPAEAIAE+ ESSERVKEYNKWFLEG+DLELLD++TKVVWASSP+PLPFVKPRDFVTVV+VRRL DGSI+VVNRGY+HP APPS +YVRGEVILAANVI+PD K RNRT FT+LTQVDPGGIAPAWIVN+ISA DPVDFL+RVE AAGRS +A + Sbjct: 131 AETNEGLREALLAETRSVQAPP-----DRRRFRGGW--IGSIGRRFGSG---IDGVRDIVEAAAGNQPEIHAEEAAERLRGMLERNQRELSWHVARANGLLAKWAAQAAAEERRLEARLSKMREGQMAAVSEVVTTAEGHLRRAALDKQIQGVREEWFERQAVLREQLTRRQQDIAERMRAVTIDSKIMAKLYDEFLMGKKAKIDTSVANEDSFRRALELILEDTEEGGWERVVSTRNGALSVERKFIGKNSGGSKFACIRAWCSMDVPAEAIAEMMESSERVKEYNKWFLEGRDLELLDENTKVVWASSPSPLPFVKPRDFVTVVHVRRLEDGSIIVVNRGYKHPEAPPSTEYVRGEVILAANVIRPDPKDRNRTQFTLLTQVDPGGIAPAWIVNKISAHDPVDFLERVETAAGRSESAKR 542
BLAST of mRNA_L-elsbetiae_contig1894.5564.1 vs. uniprot
Match: A0A6H5KPT5_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPT5_9PHAE) HSP 1 Score: 557 bits (1435), Expect = 1.380e-180 Identity = 313/470 (66.60%), Postives = 367/470 (78.09%), Query Frame = 3 Query: 3 RCRAHVISFLRE--SLPSSVGGGAQARACH------AEEASSQAETIEGLRKALSAERGVQDKLHPGQRDEKHGEGSWSLTAVLGRRLRSFRRRF----NGMRDLVEAAAGNHPEIRPEEAADRLKTLLDNNQKELRRQVANANGLLAKWAAQASAEERRLEARLSEMRDAQRAILSDVVTTAEARLQRAALEAQIDAVRRDWSDRQAVLRDQLGKRQQDIAQKMRAVTSDSKILAKIYDEFLMRQRKEMHTTNANEDTFRRALELILEDTEEGGWERVVSSKKGSLSVQRKFIGRNSGGSKFACIRAWCTMEVPAEAIAELFESSERVKEYNKWFLEGQDLELLDDDTKVVWASSPAPLPFVKPRDFVTVVNVRRLGDGSIVVVNRGYRHPAAPPSNDYVRGEVILAANVIKPDSKSRNRTHFTMLTQVDPGGIAPAWIVNQISARDPVDFLQRVEAAAGRSGAATKIP 1376 RCR S ++E S+P G A H A A +QAET EGLR+AL AE Q P D + G W +RS RRF +GMRD+VE AAG+ EI EEAA+RL+ +L NQ+EL VA ANGLLAKWAAQA+AEERRLEARLS+MR+ Q ++ VVTTAE L+RAAL+ QI VR +W +RQAVLR+QL KRQQD+A++MRAVT DSKILAK+YDE LMR++ ++ + ANED+FRRALELILED EEGGWERVVS++ G+LSV+RKFIG+N+GGSKFACIRAWC+M+VPAEA+AEL ESSERVKEYNKWFLEG+DLELLD++TKVVWASSP+PLPFVKPRDFVTVVNVRRL DGSIVVVNRGYRHP APPS +YVRGEVILAANVI+PD K RNRT FT+LTQVDPGGIAPAWIVN+ISA DPVDFL+RVE AAGRS +A + P Sbjct: 71 RCRTRTFSSVQELMSIP-----GRNRMADHVGRPETALSARTQAETNEGLREALLAE--TQSVQPPP--DRRRFRGGW---------IRSIGRRFGSGIDGMRDIVETAAGSQLEIHAEEAAERLRGMLKRNQRELSWHVARANGLLAKWAAQAAAEERRLEARLSKMREGQ---MAAVVTTAEGHLRRAALDKQIKGVREEWFERQAVLREQLTKRQQDMAERMRAVTIDSKILAKLYDELLMRKKAKIDASVANEDSFRRALELILEDAEEGGWERVVSTRNGALSVERKFIGKNAGGSKFACIRAWCSMDVPAEAVAELMESSERVKEYNKWFLEGRDLELLDENTKVVWASSPSPLPFVKPRDFVTVVNVRRLEDGSIVVVNRGYRHPEAPPSTEYVRGEVILAANVIRPDPKDRNRTQFTLLTQVDPGGIAPAWIVNKISAHDPVDFLERVETAAGRSESAKRSP 519
BLAST of mRNA_L-elsbetiae_contig1894.5564.1 vs. uniprot
Match: D8LAW9_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW9_ECTSI) HSP 1 Score: 147 bits (372), Expect = 9.760e-34 Identity = 89/234 (38.03%), Postives = 131/234 (55.98%), Query Frame = 3 Query: 753 ALELILEDTEEGGWERVVSSKKGSLSVQRKFIGR-----------------NSGGSKFACIRAWCTMEVPAEAIAELFESSERVKEYNKWFLEGQDLELLDDDTKVVWASSPAPLPFVKPRDFVTVVNVRRLGDGSIVVVNRGYRHPAAPPSNDYVRGEVILAANVIKPDSKSRNRTHFTMLTQVDPGGIAP----AWIVNQISARDPVDFLQRVEAAAGRSGAATKIPTLDVA 1391 ++E +L E GWERV +K + V RKF+ +KFAC++A T++ A + +LF +ERV EYN E +DLE L DDTKV WA +P PF K RDFVT V+ R L DG+++V+NR HPAA YVR E+++A N+++P+ + ++T F +T ++PGGIA A IVN++ A+ PV+ L +E RS + +P + A Sbjct: 254 SVEAVLAVIESDGWERVT--EKSGVVVVRKFVXXXXXXXXXXXXXXRGIVDEGAAAKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPF-KARDFVTAVHYRTLEDGTMMVLNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALE----RSANSAPVPKEEAA 480
BLAST of mRNA_L-elsbetiae_contig1894.5564.1 vs. uniprot
Match: A0A6U4ZLH7_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4ZLH7_HEMAN) HSP 1 Score: 139 bits (349), Expect = 5.520e-33 Identity = 88/223 (39.46%), Postives = 124/223 (55.61%), Query Frame = 3 Query: 783 EGGWERV-----VSSKKGSLSVQRKFIGRNSG-GSKFACIRAWCTMEVPAEAIAELFESSERVKEYNKWFLEGQDLELLDDDTKVVWASSPAPLPFVKPRDFVTVVNVRRLGDGSIVVVNRGYRHPAAPPSNDYVRGEVILAANVIKPDSKSRNRTHFTMLTQVDPGGIAPA----WIVNQISARDPVDFLQRVEAAAGRSGAATKIPT----LDVA-DHADE 1406 EG WE++ ++ K LS GR G SKF C++A ++ + LF + RV+EYN++ + +DLE + TKV W++S PF K RDFVT V+ R L D +++VVNR HPAAP ++ Y+R E++L NV+KP +T FTMLT V+PGG+A I+N +A P+ F+Q + A R A PT LD A DHA E Sbjct: 2 EGAWEKICETDGINVMKTRLSSDTLIGGRPVGEASKFLCVKAEAVLDASPAQVYTLFVDNTRVREYNEFCKQIRDLEYKNSTTKVTWSASARIGPF-KERDFVTRVHYRTLPDQTLLVVNRAEDHPAAPQTDRYLRMEIVLGGNVMKPVPSDPEKTMFTMLTHVNPGGVAGTRMGTMIMNSAAANGPISFVQGLRDALKRDAAGIPPPTWPEPLDEAQDHAQE 223
BLAST of mRNA_L-elsbetiae_contig1894.5564.1 vs. uniprot
Match: A0A6H5JSI0_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI0_9PHAE) HSP 1 Score: 139 bits (350), Expect = 2.250e-31 Identity = 78/179 (43.58%), Postives = 113/179 (63.13%), Query Frame = 3 Query: 867 SKFACIRAWCTMEVPAEAIAELFESSERVKEYNKWFLEGQDLELLDDDTKVVWASSPAPLPFVKPRDFVTVVNVRRLGDGSIVVVNRGYRHPAAPPSNDYVRGEVILAANVIKPDSKSRNRTHFTMLTQVDPGGIAP----AWIVNQISARDPVDFLQRVEAAAGRSGAATKIPTLDVA 1391 +KFAC++A T++ A + +LF +ERV EYN E +DLE L DDTKV WA +P PF K RDFVT V+ R L DG+++VVNR HPAA YVR E+++A N+++P+ + ++T F +T ++PGGIA A IVN++ A+ PV+ L +E RS + +P +VA Sbjct: 242 AKFACVKAMGTLDARASDLYKLFLDNERVHEYNDNCKEVRDLERLSDDTKVSWACTPRYRPF-KARDFVTAVHYRTLEDGTMMVVNRPVEHPAARRGKKYVRAEILIATNIMRPNREDPSKTDFISVTHINPGGIADSRIGAKIVNKLCAKAPVNLLVALE----RSANSAPVPREEVA 415
BLAST of mRNA_L-elsbetiae_contig1894.5564.1 vs. uniprot
Match: A0A482SK02_9ARCH (START domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SK02_9ARCH) HSP 1 Score: 129 bits (325), Expect = 2.370e-31 Identity = 64/118 (54.24%), Postives = 86/118 (72.88%), Query Frame = 3 Query: 948 RVKEYNKWFLEGQDLELLDDDTKVVWASSPAPLPFVKPRDFVTVVNVRRLGDGSIVVVNRGYRHPAAPPSNDYVRGEVILAANVIKPDSKSRNRTHFTMLTQVDPGGIAPAWIVNQIS 1301 RVKEYN F EG+DLE++ ++TKVVWASS PF KPRDF TVV+ R+L DG++VV+NR +HP AP ++ +VRG VIL AN+I+P +++ TM+ QVDPGG P I+N +S Sbjct: 7 RVKEYNTLFDEGRDLEVVAENTKVVWASSIPIFPF-KPRDFCTVVHTRKLKDGTMVVLNRATKHPDAPTTSKFVRGAVILGANIIQPVKGHKDQCRLTMIAQVDPGGFTPPVIINHVS 123
BLAST of mRNA_L-elsbetiae_contig1894.5564.1 vs. uniprot
Match: L1J651_GUITC (START domain-containing protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1J651_GUITC) HSP 1 Score: 134 bits (338), Expect = 7.030e-30 Identity = 76/195 (38.97%), Postives = 110/195 (56.41%), Query Frame = 3 Query: 789 GWERVVSSKKGSLSVQRKFIGRNSGGSKFACIRAWCTMEVPAEAIAELFESSERVKEYNKWFLEGQDLELLDDDTKVVWASSPAPLPFVKPRDFVTVVNVRRLGDGSIVVVNRGYRHPAAPPSNDYVRGEVILAANVIKPDSKSRNRTHFTMLTQVDPGGIAP----AWIVNQISARDPVDFLQRVEAAAGRSGA 1361 GWE V+ + G +++ + GG KF C++A ++ A I EL + S RV EYN+ + +DL L DTKV WA+S PF KPRDFVT V+ +L DG+ V+++R DYVR EV+LA NV++P N+T FT + ++PGG A A I N+I PV F++++E G+ GA Sbjct: 223 GWEHVLH-QDGVDVYRKRIVDLYQGGEKFYCVKAVGVIDAKAADIYELLKDSARVDEYNEECAQVRDLSALSSDTKVTWAASKTYFPF-KPRDFVTRVHNTQLNDGTYVIMSRSEDVDFTDGGADYVRTEVLLAGNVMRPCPDDPNKTEFTTIAHINPGGAADTPLGAQITNRICIHGPVSFIRKIETVCGKGGA 415
BLAST of mRNA_L-elsbetiae_contig1894.5564.1 vs. uniprot
Match: D8LLJ0_ECTSI (START domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ0_ECTSI) HSP 1 Score: 137 bits (344), Expect = 1.220e-29 Identity = 75/174 (43.10%), Postives = 108/174 (62.07%), Query Frame = 3 Query: 846 IGRNSGGSK---FACIRAWCTMEVPAEAIAELFESSERVKEYNKWFLEGQDLELLDDDTKVVWASSPAPLPFVKPRDFVTVVNVRRLGDGSIVVVNRGYRHPAAPPSNDYVRGEVILAANVIKPDSKSRNRTHFTMLTQVDPGGIAP----AWIVNQISARDPVDFLQRVEAAA 1346 +G +SG SK FAC++A + VP E + LF + RV EYN+ E +DLE+L D+K+ WA+S PF K RDF T+V+ R L DG++ V++ HPAAP ++ YVR E++LA N ++P +RT F M+T V+PGG A A +VN + PV F++R+E AA Sbjct: 389 VGDDSGKSKPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPF-KARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAA 561
BLAST of mRNA_L-elsbetiae_contig1894.5564.1 vs. uniprot
Match: A0A7S2V5A8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5A8_9STRA) HSP 1 Score: 131 bits (330), Expect = 5.770e-29 Identity = 80/204 (39.22%), Postives = 120/204 (58.82%), Query Frame = 3 Query: 786 GGWERVVSSKKGSLSVQRKFIGRNS----------GGS---KFACIRAWCTMEVPAEAIAELFESSERVKEYNKWFLEGQDLELLDDDTKVVWASSPAPLPFVKPRDFVTVVNVRRLGDGSIVVVNRGYRHPAAPPSNDYVRGEVILAANVIKPDSKSRNRTHFTMLTQVDPGGIA----PAWIVNQISARDPVDFLQRVEAAA 1346 G W+++ S + ++ +RK G + GG+ KFA I+A T++ P E + +LF + RV EYN E +DLE + TKV W++S PF K RDF T+V+ L DG+ +V+ + HP AP ++ YVR EVI+A + ++ D K N+T FT +TQV+PGGIA A IVN +S + P+ F+++VE AA Sbjct: 178 GDWDQITSGEGVTVFARRKQGGARARAVSAAHGGEGGAVNDKFAVIKAVGTIDAPIEEVHKLFVDNSRVGEYNDHCHEIKDLEWVGPRTKVTWSASGKYGPF-KARDFCTLVHFATLADGTQAIVSVPFNHPQAPATSRYVRSEVIMAGHFMRRDPKDPNKTAFTTITQVNPGGIAGSAGAAKIVNSLSTQGPITFVKKVELAA 380
BLAST of mRNA_L-elsbetiae_contig1894.5564.1 vs. uniprot
Match: A0A6H5J623_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J623_9PHAE) HSP 1 Score: 134 bits (337), Expect = 1.400e-28 Identity = 73/174 (41.95%), Postives = 107/174 (61.49%), Query Frame = 3 Query: 846 IGRNSGGSK---FACIRAWCTMEVPAEAIAELFESSERVKEYNKWFLEGQDLELLDDDTKVVWASSPAPLPFVKPRDFVTVVNVRRLGDGSIVVVNRGYRHPAAPPSNDYVRGEVILAANVIKPDSKSRNRTHFTMLTQVDPGGIAP----AWIVNQISARDPVDFLQRVEAAA 1346 +G +SG + FAC++A + VP E + LF + RV EYN+ E +DLE+L D+K+ WA+S PF K RDF T+V+ R L DG++ V++ HPAAP ++ YVR E++LA N ++P +RT F M+T V+PGG A A +VN + PV F++R+E AA Sbjct: 355 VGEDSGKFRPPQFACVKASAILSVPPEVVYLLFADNSRVGEYNEHCREVKDLEVLSQDSKITWAASGRMGPF-KARDFCTLVHFRTLSDGTLAQVSKPVEHPAAPRTSRYVRSEILLAGNFMRPVPGDPSRTEFLMVTHVNPGGAAETRAGAMLVNSLCTSSPVTFIRRLEVAA 527 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1894.5564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1894.5564.1 >prot_L-elsbetiae_contig1894.5564.1 ID=prot_L-elsbetiae_contig1894.5564.1|Name=mRNA_L-elsbetiae_contig1894.5564.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=380bp MRDLVEAAAGNHPEIRPEEAADRLKTLLDNNQKELRRQVANANGLLAKWAback to top mRNA from alignment at L-elsbetiae_contig1894:1397..16238- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1894.5564.1 ID=mRNA_L-elsbetiae_contig1894.5564.1|Name=mRNA_L-elsbetiae_contig1894.5564.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=14842bp|location=Sequence derived from alignment at L-elsbetiae_contig1894:1397..16238- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1894:1397..16238- >mRNA_L-elsbetiae_contig1894.5564.1 ID=mRNA_L-elsbetiae_contig1894.5564.1|Name=mRNA_L-elsbetiae_contig1894.5564.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2280bp|location=Sequence derived from alignment at L-elsbetiae_contig1894:1397..16238- (Laminarionema elsbetiae ELsaHSoW15)back to top |