prot_L-elsbetiae_contig10574.555.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10574.555.1
Unique Nameprot_L-elsbetiae_contig10574.555.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length181
Homology
BLAST of mRNA_L-elsbetiae_contig10574.555.1 vs. uniprot
Match: A0A6H5JWJ6_9PHAE (BRISC and BRCA1-A complex member 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ6_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 5.800e-31
Identity = 58/76 (76.32%), Postives = 64/76 (84.21%), Query Frame = 0
Query:   26 GATSQVRPVVRAVVLFGRSYTCPLVPPGGAEKPALLSHRRFCLDCLYVHRPPAEEGVICQDVFDSIAALETSAGGG 101
            GA SQVRPVVRA+VL+GRSY CPLVPP GAEK  LLSH RF LDCLY HR P+EEGVIC ++FDSIA +ETS GGG
Sbjct:  235 GAMSQVRPVVRALVLYGRSYICPLVPPTGAEKHGLLSHWRFFLDCLYFHRKPSEEGVICGEIFDSIATMETSGGGG 310          
BLAST of mRNA_L-elsbetiae_contig10574.555.1 vs. uniprot
Match: D7G9C7_ECTSI (BRISC and BRCA1-A complex member 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9C7_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 1.210e-30
Identity = 57/76 (75.00%), Postives = 65/76 (85.53%), Query Frame = 0
Query:   26 GATSQVRPVVRAVVLFGRSYTCPLVPPGGAEKPALLSHRRFCLDCLYVHRPPAEEGVICQDVFDSIAALETSAGGG 101
            GA SQVRPVVRA+VL+GRS+TCP+VPP GAEK  LLSH RF LDCLY HR P++EGVIC +VFDSIA +ETS GGG
Sbjct:  221 GAISQVRPVVRALVLYGRSFTCPVVPPTGAEKHGLLSHWRFFLDCLYFHRKPSDEGVICGEVFDSIATMETSGGGG 296          
BLAST of mRNA_L-elsbetiae_contig10574.555.1 vs. uniprot
Match: A0A7S3US84_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3US84_HETAK)

HSP 1 Score: 78.2 bits (191), Expect = 4.570e-14
Identity = 42/106 (39.62%), Postives = 65/106 (61.32%), Query Frame = 0
Query:   36 RAVVLFGRSYTCP-LVPPGGAEKPALLSHRRFCLDCLYVHRPPAEEGVICQDVFDSIAALETSAGGG-SFFLACGHSLRHFHSNLAALLAHPAQRDFQAVFFDKLD 139
            RAVV +GRS+  P +V    A++  LL    F  D LY+H+ P+EEGVICQ+++DS+  +E+      S+F+    S++  + ++  LL HPAQRD Q  F  K++
Sbjct:   75 RAVVFYGRSHARPDVVLDAPAQR--LLDAPGFFFDLLYIHKRPSEEGVICQEIYDSLVKIESQVPTKQSYFMETSTSIQRLYMHMCMLLTHPAQRDLQENFVAKVE 178          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10574.555.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JWJ6_9PHAE5.800e-3176.32BRISC and BRCA1-A complex member 1 n=1 Tax=Ectocar... [more]
D7G9C7_ECTSI1.210e-3075.00BRISC and BRCA1-A complex member 1 n=1 Tax=Ectocar... [more]
A0A7S3US84_HETAK4.570e-1439.62Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026126BRISC and BRCA1-A complex member 1PANTHERPTHR15660UNCHARACTERIZEDcoord: 33..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10574contigL-elsbetiae_contig10574:2948..6739 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10574.555.1mRNA_L-elsbetiae_contig10574.555.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10574 1883..6739 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10574.555.1 ID=prot_L-elsbetiae_contig10574.555.1|Name=mRNA_L-elsbetiae_contig10574.555.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=181bp
MHIQRNRGGGSSNNNAPLGGGGAGAGATSQVRPVVRAVVLFGRSYTCPLV
PPGGAEKPALLSHRRFCLDCLYVHRPPAEEGVICQDVFDSIAALETSAGG
GSFFLACGHSLRHFHSNLAALLAHPAQRDFQAVFFDKLDVPGGSATGEGT
VARADSNTTTGGGGGGLGSGGNRSANGSLS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026126BABAM1