prot_L-elsbetiae_contig189.5552.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig189.5552.1
Unique Nameprot_L-elsbetiae_contig189.5552.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length380
Homology
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BLAST of mRNA_L-elsbetiae_contig189.5552.1 vs. uniprot
Match: D7FIT3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIT3_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 6.050e-32
Identity = 102/171 (59.65%), Postives = 111/171 (64.91%), Query Frame = 0 
Query:  190 SPATGVRSRARVLAQQREIQVRKRRQQALSSGGIRPSDAASLSRGLVSSGPASASPRRAS-----EGASGXXXXXXGAEGHQ--EDGLLGXXXXXXXSEGSYPSFSPSVKQFSAPRQASRRGETGVEGDAYTAFNSNK-------RTSALGLSEFERRRSIGQVELSESDE 346
            S ATGVRSRARVLAQQREIQ RKRRQQALSSGGIR SDAASLSRGLVS G  + S RR S      G  G        +G Q  ED LL        +E  Y SFSPSVKQFSAPRQ        VEGDAYTAFNSN        R S  G+SEFE+RRSIGQ+ LS+S++
Sbjct:   42 SSATGVRSRARVLAQQREIQQRKRRQQALSSGGIRASDAASLSRGLVSGG--AGSHRRPSLNIVDAGDGGGPAHPSSGDGDQGPEDSLL------DGNEEPYNSFSPSVKQFSAPRQ--------VEGDAYTAFNSNDPRHAAAGRMSGGGMSEFEQRRSIGQIGLSDSED 196
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig189.5552.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIT3_ECTSI6.050e-3259.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig189contigL-elsbetiae_contig189:36564..42376 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig189.5552.1mRNA_L-elsbetiae_contig189.5552.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig189 23334..42376 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig189.5552.1 ID=prot_L-elsbetiae_contig189.5552.1|Name=mRNA_L-elsbetiae_contig189.5552.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=380bp
MFMDPSAFEAEDIERELRDAGVEPETTAGGATSEFQRTINGGREDPLRRP
GKSSTAAPPSSGSHFGLHSGGVPEGRRIPDHHQYHQHQPRALAENLGGSS
TRQHKGTRSYGRHSKGGGSWSSAAQGRSQVSPPPSTPPSDNSSSLHGGGS
GASYAFGHGDDGGNRAGDEGTFREGSPEGYTPGGSPASSSPATGVRSRAR
VLAQQREIQVRKRRQQALSSGGIRPSDAASLSRGLVSSGPASASPRRASE
GASGNGGGGGGAEGHQEDGLLGGSHEGHESEGSYPSFSPSVKQFSAPRQA
SRRGETGVEGDAYTAFNSNKRTSALGLSEFERRRSIGQVELSESDEDGEG
ENSLASTNGGGAGRRRRNNNKAAPDMDSR*
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