mRNA_L-elsbetiae_contig189.5552.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig189.5552.1 vs. uniprot
Match: D7FIT4_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIT4_ECTSI) HSP 1 Score: 446 bits (1146), Expect = 1.330e-139 Identity = 229/271 (84.50%), Postives = 240/271 (88.56%), Query Frame = 1 Query: 2530 LEFNMAAIDLSDMKRFLMSPCPRAAGVVQCYIRRNKTRANKIFPEYTLFMKEGDRFLMCSKKRPNNATSNYLVSMRAGDLDRHSTNFLGKLRANFVGTEFQVFDDGYSPKEQTGTFGGGWGSGNHGSGSG------ATNRPMREELGCVMYASNVLGSRGPRKMQVAVPAVSEAGVVSKWSELDGG------GSGSKAIERVKNRDYDGSLYMVNKPPRWNDQVGAYVLNFYGRVTMASVKNFQLVSTEDFDRIILQFGRVARDEFTMDFQ 3306 +EFNMAA+DLSDMKRFL+SPCPRAAGVVQCYIRRNKTRANKIFPEY+LF+KEGDRFLMCSKKRPNNATSNYLVSMRAGDLDR+STNFLGKLRANFVGTEFQVFDDGYSPKE G GGGWGS A N +REELGCVMYASNVLGSRGPRKMQVA+PAV+EAG V KWS L+GG G GSKAIERVKNRDYDGSLYMVNKPPRWNDQVGAYVLNFYGRVTMASVKNFQLVSTEDFDRIILQFGRVAR+EFTMDFQ Sbjct: 1 MEFNMAALDLSDMKRFLLSPCPRAAGVVQCYIRRNKTRANKIFPEYSLFLKEGDRFLMCSKKRPNNATSNYLVSMRAGDLDRNSTNFLGKLRANFVGTEFQVFDDGYSPKELGG--GGGWGSXXXXXXXXXXXXXXAKNMSLREELGCVMYASNVLGSRGPRKMQVAIPAVNEAGEVCKWSGLEGGRGSQTAGGGSKAIERVKNRDYDGSLYMVNKPPRWNDQVGAYVLNFYGRVTMASVKNFQLVSTEDFDRIILQFGRVAREEFTMDFQ 269
BLAST of mRNA_L-elsbetiae_contig189.5552.1 vs. uniprot
Match: A0A6H5JKE0_9PHAE (Tub domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKE0_9PHAE) HSP 1 Score: 336 bits (862), Expect = 6.400e-102 Identity = 176/217 (81.11%), Postives = 184/217 (84.79%), Query Frame = 1 Query: 2701 MCSKKRPNNATSNYLVSMRAGDLDRHSTNFLGKLRANFVGTEFQVFDDGYSPKEQTGTFGGGWGSGNHGSGSG------ATNRPMREELGCVMYASNVLGSRGPRKMQVAVPAVSEAGVVSKWSELDGG------GSGSKAIERVKNRDYDGSLYMVNKPPRWNDQVGAYVLNFYGRVTMASVKNFQLVSTEDFDRIILQFGRVARDEFTMDFQVYS 3315 MCSKKRPNNATSNYLVSMRAGDLDR+STNFLGKLRANFVGTEFQVFDDGYSPKE G GGGWG A N +REELGCVMYASNVLGSRGPRKMQVA+PAV+EAG V KWS L+GG G GSKAIERVKNRDYDGSLYMVNKPPRWNDQVGAYVLNFYGRVTMASVKNFQLVSTEDFDRIILQFGRVAR+EFTMDFQ ++ Sbjct: 1 MCSKKRPNNATSNYLVSMRAGDLDRNSTNFLGKLRANFVGTEFQVFDDGYSPKELGG--GGGWGXXXXXXXXXXXXXXXAKNMSLREELGCVMYASNVLGSRGPRKMQVAIPAVNEAGEVCKWSGLEGGRGSQAAGGGSKAIERVKNRDYDGSLYMVNKPPRWNDQVGAYVLNFYGRVTMASVKNFQLVSTEDFDRIILQFGRVAREEFTMDFQAFA 215
BLAST of mRNA_L-elsbetiae_contig189.5552.1 vs. uniprot
Match: A0A7S2XZ24_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ24_9STRA) HSP 1 Score: 305 bits (780), Expect = 6.240e-90 Identity = 155/262 (59.16%), Postives = 198/262 (75.57%), Query Frame = 1 Query: 2533 EFNMAAIDLSDMKRFLMSPCPRAAGVVQCYIRRNKTRANKIFPEYTLFMKEG---DRFLMCSKKRPNNATSNYLVSMRAGDLDRHSTNFLGKLRANFVGTEFQVFDDGYSPKEQTGTFGGGWGSGNHGSGSGATNRPMREELGCVMYASNVLGSRGPRKMQVAVPAVSEAG-VVSKWSELDGGGSGSKAIERVKNRDYDGSLYMVNKPPRWNDQVGAYVLNFYGRVTMASVKNFQLVSTEDFDRIILQFGRVARDEFTMDFQ 3306 EFN A+DLSDM++FLMSP P+AAG+VQC I+RNK+ NK+FPEY +FMK+ +RFL+CSKKRP N TSNYL+SM+ GDL+R TNFLGKLRANFVGTEFQ++DDG +P++ + G G G+ R ELG V+YASN+LGSRGPRKMQVAVP V E G V+ + D + ++ VKN D++ +Y++NKPPRWND+VGAYVLNF GRVTMASVKNFQL+ ++ + ++LQFGRVA+D+FTMDFQ Sbjct: 27 EFNPEALDLSDMRKFLMSPAPQAAGIVQCSIKRNKSGTNKLFPEYEVFMKDASGVERFLLCSKKRPGNKTSNYLISMKQGDLNRSGTNFLGKLRANFVGTEFQIYDDGLNPRDLEPEY--------LGEGQGS-----RHELGVVLYASNMLGSRGPRKMQVAVPMVDEDGNVLQPRTPKD-----DEMLQMVKNDDFNNLIYLINKPPRWNDEVGAYVLNFNGRVTMASVKNFQLIEQDNPECVLLQFGRVAKDKFTMDFQ 270
BLAST of mRNA_L-elsbetiae_contig189.5552.1 vs. uniprot
Match: A0A835YWG7_9STRA (Tub domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWG7_9STRA) HSP 1 Score: 296 bits (758), Expect = 1.960e-87 Identity = 151/252 (59.92%), Postives = 185/252 (73.41%), Query Frame = 1 Query: 2566 MKRFLMSPCPRAAGVVQCYIRRNKTRANKIFPEYTLFMKEGDRFLMCSKKRPNNATSNYLVSMRAGDLDRHSTNFLGKLRANFVGTEFQVFDDGYSPKEQTGTFGGGWGSGNHGSGSGATNRPMREELGCVMYASNVLGSRGPRKMQVAVPAVSEAGVVSKWSELDGGGSGSKAIER-----VKNRDYDGSLYMVNKPPRWNDQVGAYVLNFYGRVTMASVKNFQLVSTEDFDRIILQFGRVARDEFTMDFQ 3306 MK FL SPCPRAAGVVQCYIRRNK K+FPEY +++ +GD+FLMCSK+RPNN TSNY++SMRAGDL+R S N+LGKLRANF+GTEFQ+FD G +P++ +GN G A R ELG V+YASNVLGSRGPRKMQVA+P + E G ++ G G+ E +KN + + Y++NKPPRWNDQV AYVLNF GRVTMASVKNFQLV+ +D + ++LQFGRVA+DEFTMDFQ Sbjct: 1 MKGFLTSPCPRAAGVVQCYIRRNKAGTAKLFPEYHVYLADGDKFLMCSKRRPNNKTSNYIISMRAGDLNRGSPNYLGKLRANFIGTEFQIFDHGANPRDLL--------AGNFGHPEQA-----RSELGVVLYASNVLGSRGPRKMQVAIPKIREDGTPLALAKGTGAGAKGTMPEEDMMMHLKNHNCETLCYLINKPPRWNDQVSAYVLNFNGRVTMASVKNFQLVTPDDHETVVLQFGRVAKDEFTMDFQ 239
BLAST of mRNA_L-elsbetiae_contig189.5552.1 vs. uniprot
Match: F0XZM0_AURAN (Tub domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZM0_AURAN) HSP 1 Score: 288 bits (738), Expect = 7.770e-85 Identity = 151/261 (57.85%), Postives = 182/261 (69.73%), Query Frame = 1 Query: 2563 DMKRFLMSPCPRAAGVVQCYIRRNKTRANKIFPEYTLFMKEGDRFLMCSKKRPNNATSNYLVSMRAGDLDRHSTNFLGKLRANFVGTEFQVFDDGYSPK------EQTGTFGGGWGSGNHGSGSGATNRPMREELGCVMYASNVLGSRGPRKMQVAVPAVSEAGVVSKWSELDGG----GSGSKAIERVKNRDYDGS---LYMVNKPPRWNDQVGAYVLNFYGRVTMASVKNFQLVSTEDFDRIILQFGRVARDEFTMDFQ 3306 DM+ FL +P PR AG+VQCYI+RN++ NK+FPEY++FMKEGDRF+MCSKKRPNN TSNYL+SM DL R+S N++GKLRANF GTEFQ+FD G++PK E+ G MR ELG ++Y SNVLGSRGPRKMQV++PAV EA DG G G + ++K +Y +YM+NKPPRWNDQVGAYVLNF GRVTMASVKNFQLV +D D I+LQFGRV +DEFTMDFQ Sbjct: 1 DMRLFLTTPTPRRAGIVQCYIKRNRSGTNKLFPEYSVFMKEGDRFMMCSKKRPNNKTSNYLISMGENDLKRNSHNYIGKLRANFAGTEFQIFDAGWNPKGFEPDLEEEGA-------------------QMRHELGAIIYTSNVLGSRGPRKMQVSIPAVDEA--------ADGADKPRGMGD-ILSKMKAHEYGAGTSLVYMINKPPRWNDQVGAYVLNFNGRVTMASVKNFQLVQPDDQDAILLQFGRVGKDEFTMDFQ 233
BLAST of mRNA_L-elsbetiae_contig189.5552.1 vs. uniprot
Match: A0A7S2VW98_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VW98_9STRA) HSP 1 Score: 281 bits (720), Expect = 1.970e-80 Identity = 147/264 (55.68%), Postives = 185/264 (70.08%), Query Frame = 1 Query: 2527 ELEFNMAAIDLSD-MKRFLMSPCPRAAGVVQCYIRRNKTRANKIFPEYTLFMKEGDRFLMCSKKRPNNATSNYLVSMRAGDLDRHSTNFLGKLRANFVGTEFQVFDDGYSPKEQTGTFGGGWGSGNHGSGSGATNRPMREELGCVMYASNVLGSRGPRKMQVAVPAVSEAGVVSKWSELDGGGSGSKAIERVKNRDYDGS---LYMVNKPPRWNDQVGAYVLNFYGRVTMASVKNFQLVSTEDFDRIILQFGRVARDEFTMDFQ 3306 E F+ A +DL + MK+FL SPCP+ AG+VQCYI+RNK+ NK+ P Y++++KEGDRFLM SKKR N TSNYL+SM GD +++S N++GK+RANF+GTEFQ++D+G + + GG G +REELGC++YASNVLGSRGPRKMQV + VSE + W + + + KNRD G + ++NKPPRWNDQVGAYVLNF GRVTMASVKNFQLV D D IILQFGRVA+DEFT DFQ Sbjct: 133 ERPFDFAELDLDNRMKKFLKSPCPKRAGIVQCYIKRNKSGTNKLHPVYSVYLKEGDRFLMTSKKRAKNTTSNYLISMELGDHNKNSANYIGKVRANFLGTEFQIYDNGINYNDS-----GGMGE-------------IREELGCILYASNVLGSRGPRKMQVCINKVSEDKGMYVWKPTN---KDEEMLNVFKNRDEYGMKNIISLINKPPRWNDQVGAYVLNFNGRVTMASVKNFQLVDQLDHDNIILQFGRVAKDEFTCDFQ 375
BLAST of mRNA_L-elsbetiae_contig189.5552.1 vs. uniprot
Match: A0A812T167_SYMMI (Tulp1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812T167_SYMMI) HSP 1 Score: 274 bits (701), Expect = 5.330e-80 Identity = 137/242 (56.61%), Postives = 170/242 (70.25%), Query Frame = 1 Query: 2581 MSPCPRAAGVVQCYIRRNKTRANKIFPEYTLFMKEGDRFLMCSKKRPNNATSNYLVSMRAGDLDRHSTNFLGKLRANFVGTEFQVFDDGYSPKEQTGTFGGGWGSGNHGSGSGATNRPMREELGCVMYASNVLGSRGPRKMQVAVPAVSEAGVVSKWSELDGGGSGSKAIERVKNRDYDGSLYMVNKPPRWNDQVGAYVLNFYGRVTMASVKNFQLVSTEDFDRIILQFGRVARDEFTMDFQ 3306 M P PR AG+VQC I RNK NK+FP Y+L++K+ DRFLMCSKKR +N TSNYL+S DL R S N+LGKLR+NFVGTEFQV+D+G SP + G G +R ELG VMYA NVLGSRGPRKMQV +P V E+ + W + G S + ++R+K+R++ Y++NKPPRWN+QVGAYVLNF GRVTMASVKNFQLV E+ + +ILQFGRV +D+FTMD Q Sbjct: 1 MRPLPRGAGIVQCTIVRNKAGTNKLFPIYSLYLKDNDRFLMCSKKRAHNKTSNYLISKGENDLSRDSPNYLGKLRSNFVGTEFQVYDNGISPDGEDGGRG----------------TEVRRELGAVMYAPNVLGSRGPRKMQVCIPCVDESNAIVTWRQQRG--SDGEILQRMKDRNFRDLCYLINKPPRWNEQVGAYVLNFSGRVTMASVKNFQLVDPEEQNAVILQFGRVGKDQFTMDMQ 224
BLAST of mRNA_L-elsbetiae_contig189.5552.1 vs. uniprot
Match: A0A7S3ZVG1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVG1_9STRA) HSP 1 Score: 288 bits (737), Expect = 2.910e-79 Identity = 146/258 (56.59%), Postives = 179/258 (69.38%), Query Frame = 1 Query: 2533 EFNMAAIDLSDMKRFLMSPCPRAAGVVQCYIRRNKTRANKIFPEYTLFMKEGDRFLMCSKKRPNNATSNYLVSMRAGDLDRHSTNFLGKLRANFVGTEFQVFDDGYSPKEQTGTFGGGWGSGNHGSGSGATNRPMREELGCVMYASNVLGSRGPRKMQVAVPAVSEAGVVSKWSELDGGGSGSKAIERVKNRDYDGSLYMVNKPPRWNDQVGAYVLNFYGRVTMASVKNFQLVSTEDFDRIILQFGRVARDEFTMDFQ 3306 EF+ +A+DL DM++FL + CPR AGVVQC I+RN++ NK+FPEY ++MKEGDRFLMCSKKRPNN TSNYL+SM GDL R+S N++GKLRANF GTEFQVFD G +P T R ELG V+Y +NVLGSRGPRKMQ AVP + + DG + ++K +D + Y +NKPPRWNDQVGAYVLNF GRVTMASVKNFQLV ++ D ++LQFGRV +DEFTMDF+ Sbjct: 441 EFDASALDLRDMRKFLTTACPRRAGVVQCSIKRNRSGTNKLFPEYAVYMKEGDRFLMCSKKRPNNKTSNYLISMGEGDLKRNSKNYIGKLRANFAGTEFQVFDSGANPSLID------------------TGSSERCELGAVVYTANVLGSRGPRKMQAAVPKL----------DRDGKSRSIDVLAKLKAQDKNDITYTINKPPRWNDQVGAYVLNFNGRVTMASVKNFQLVEPDEQDAVLLQFGRVGKDEFTMDFR 670
BLAST of mRNA_L-elsbetiae_contig189.5552.1 vs. uniprot
Match: A0A7S3Y0Z9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y0Z9_HETAK) HSP 1 Score: 269 bits (687), Expect = 5.460e-78 Identity = 142/249 (57.03%), Postives = 169/249 (67.87%), Query Frame = 1 Query: 2566 MKRFLMSPCPRAAGVVQCYIRRNKTRANKIFPEYTLFMKEGD--RFLMCSKKRPNNATSNYLVSMRAGDLDRHSTNFLGKLRANFVGTEFQVFDDGYSPKEQTGTFGGGWGSGNHGSGSGATNRPMREELGCVMYASNVLGSRGPRKMQVAVPAVSEAGVVSKWSELDGGGSGSKAIERVKNRDYDGSLYMVNKPPRWNDQVGAYVLNFYGRVTMASVKNFQLVSTEDFDRIILQFGRVARDEFTMDFQ 3306 M+RFLM P R AG+VQC I RNK+ NK+FP Y +FMK GD RFL+ KKR N TSNYL+SM+ GDL R S NFLGKLRANFVGTEFQV+DDG +PK+ GA+ R ELG V+YASN+LGSRGPRKMQV VP V G ++ G + VK D +Y++NKPPRWND+VGAYVLNF GRVTMASVKNFQL+ E + ++LQFGRVA+D+FTMDFQ Sbjct: 1 MRRFLMEPVAREAGIVQCSIVRNKSGTNKLFPNYQVFMKYGDQERFLLAGKKRAGNKTSNYLISMQEGDLSRESRNFLGKLRANFVGTEFQVYDDGVNPKDLDAV--------------GASADQARRELGVVLYASNMLGSRGPRKMQVFVPQVDPQGRAREFRPASG--REGDMLGAVKREDLTDLIYLINKPPRWNDEVGAYVLNFNGRVTMASVKNFQLIEGERPEDVLLQFGRVAKDKFTMDFQ 233
BLAST of mRNA_L-elsbetiae_contig189.5552.1 vs. uniprot
Match: A0A485KK64_9STRA (Aste57867_8385 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK64_9STRA) HSP 1 Score: 279 bits (714), Expect = 6.460e-78 Identity = 144/255 (56.47%), Postives = 181/255 (70.98%), Query Frame = 1 Query: 2551 IDLSDMKRFLMSPCPRAAGVVQCYIRRNKTRANKIFPEYTLFMKEGDRFLMCSKKRPNNATSNYLVSMRAGDLDRHST-NFLGKLRANFVGTEFQVFDDGYSPKEQTGTFGGGWGSGNHGSGSGATNRP--MREELGCVMYASNVLGSRGPRKMQVAVPAVSEAGVVSKWSELDGGGSGSKAIERVKNRDYDGSLYMVNKPPRWNDQVGAYVLNFYGRVTMASVKNFQLVSTEDFDRIILQFGRVARDEFTMDFQ 3306 +DL+DMK FL+ P P+A VV+CYI RN+T ANK+FPEY L+MKEGDRFL+ +KKRPNN TSNYL+SM+ GDL R S+ NFLGKLRANF+GTEF ++D G +PK G+ H T P +R+E+G +YA NVLG RGPRKM+V VP V E G W + + + + K +D+ Y++NKPPRWNDQVGAYVLNF GRVTMASVKNFQLV+ ED + +ILQFGRV ++ FTMDF+ Sbjct: 276 LDLTDMKAFLLRPVPKAYDVVECYIERNRTGANKLFPEYCLYMKEGDRFLLTAKKRPNNRTSNYLISMQRGDLSRKSSENFLGKLRANFIGTEFVIYDSGVNPK----------GADQHT----LTVNPASVRQEMGIAVYAKNVLGHRGPRKMKVCVPRVREDGTRVVWRPVT---KDDEMLNKCKEQDHTNLTYLINKPPRWNDQVGAYVLNFNGRVTMASVKNFQLVTPEDQETVILQFGRVGKELFTMDFR 513 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig189.5552.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig189.5552.1 >prot_L-elsbetiae_contig189.5552.1 ID=prot_L-elsbetiae_contig189.5552.1|Name=mRNA_L-elsbetiae_contig189.5552.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=380bp MFMDPSAFEAEDIERELRDAGVEPETTAGGATSEFQRTINGGREDPLRRPback to top mRNA from alignment at L-elsbetiae_contig189:23334..42376- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig189.5552.1 ID=mRNA_L-elsbetiae_contig189.5552.1|Name=mRNA_L-elsbetiae_contig189.5552.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=19043bp|location=Sequence derived from alignment at L-elsbetiae_contig189:23334..42376- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig189:23334..42376- >mRNA_L-elsbetiae_contig189.5552.1 ID=mRNA_L-elsbetiae_contig189.5552.1|Name=mRNA_L-elsbetiae_contig189.5552.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2280bp|location=Sequence derived from alignment at L-elsbetiae_contig189:23334..42376- (Laminarionema elsbetiae ELsaHSoW15)back to top |