mRNA_L-elsbetiae_contig18875.5542.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig18875.5542.1
Unique NamemRNA_L-elsbetiae_contig18875.5542.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig18875.5542.1 vs. uniprot
Match: D7FYQ9_ECTSI (Phosphopyruvate hydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYQ9_ECTSI)

HSP 1 Score: 449 bits (1154), Expect = 7.670e-156
Identity = 221/231 (95.67%), Postives = 225/231 (97.40%), Query Frame = 1 
Query:    1 AVRVVSQVYHELKSVIKDKYGQDACNVGDEGGFAPNIQSNLEGIELLMAAIKKAGYEDKVVVGMDVASSEFLMPDGRYDLDFKNKGGDQQLTGEELGQLYKDLAAKYPIVSIEDPFDQDDWANYAPFTAAVGDSVQVVGDDLLVTNPSRIVEAGEKKACNALLLKVNQIGSVTESIKAVKMSKQLGWGVMTSHRSGETEDNYIADIAVGLCTGQIKTGAPCRSERLAKYNQ 693
            A+ +  +VYHELKSVIK KYGQDACNVGDEGGFAPNIQSNLEGIELLMAAIKKAGYEDKVVVGMDVASSEFLMPDGRYDLDFKNKGGDQQLTGEELGQLYKDLAAKYPIVSIEDPFDQDDWANYAPFTAAVGD+VQVVGDDLLVTNPSRI EAGEKKACNALLLKVNQIGSVTESIKAV MSKQLGWGVMTSHRSGETEDNYIADIAVGLCTGQIKTGAPCRSERLAKYNQ
Sbjct:  199 AMSIGCEVYHELKSVIKGKYGQDACNVGDEGGFAPNIQSNLEGIELLMAAIKKAGYEDKVVVGMDVASSEFLMPDGRYDLDFKNKGGDQQLTGEELGQLYKDLAAKYPIVSIEDPFDQDDWANYAPFTAAVGDAVQVVGDDLLVTNPSRITEAGEKKACNALLLKVNQIGSVTESIKAVTMSKQLGWGVMTSHRSGETEDNYIADIAVGLCTGQIKTGAPCRSERLAKYNQ 429
[Close]
BLAST of mRNA_L-elsbetiae_contig18875.5542.1 vs. uniprot
Match: A0A835Z9Q8_9STRA (Phosphopyruvate hydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q8_9STRA)

HSP 1 Score: 409 bits (1052), Expect = 2.210e-140
Identity = 201/231 (87.01%), Postives = 213/231 (92.21%), Query Frame = 1 
Query:    1 AVRVVSQVYHELKSVIKDKYGQDACNVGDEGGFAPNIQSNLEGIELLMAAIKKAGYEDKVVVGMDVASSEFLMPDGRYDLDFKNKGGDQQLTGEELGQLYKDLAAKYPIVSIEDPFDQDDWANYAPFTAAVGDSVQVVGDDLLVTNPSRIVEAGEKKACNALLLKVNQIGSVTESIKAVKMSKQLGWGVMTSHRSGETEDNYIADIAVGLCTGQIKTGAPCRSERLAKYNQ 693
            A+++  +VYH LKSVIK KYGQDACNVGDEGGFAPNIQSN+EGIELLM AIKKAGYE +VVVGMDVASSEFLM DGRY+LDFKN GG QQLTGEELG++YKDL AKYPIVSIEDPFDQDDWANY PFT AVG SVQVVGDDLLVTNP RI EAGEKKACNALLLKVNQIG+V+ESI AVKMSKQ GWGVMTSHRSGETED YIAD+AVGLCTGQIKTGAPCRSERLAKYNQ
Sbjct:  197 AMQIGCEVYHNLKSVIKAKYGQDACNVGDEGGFAPNIQSNIEGIELLMQAIKKAGYEKEVVVGMDVASSEFLMDDGRYNLDFKNPGGKQQLTGEELGEMYKDLCAKYPIVSIEDPFDQDDWANYVPFTRAVGRSVQVVGDDLLVTNPKRIEEAGEKKACNALLLKVNQIGTVSESIMAVKMSKQNGWGVMTSHRSGETEDCYIADLAVGLCTGQIKTGAPCRSERLAKYNQ 427
[Close]
BLAST of mRNA_L-elsbetiae_contig18875.5542.1 vs. uniprot
Match: W7TR29_9STRA (Phosphopyruvate hydratase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR29_9STRA)

HSP 1 Score: 370 bits (951), Expect = 5.570e-125
Identity = 183/233 (78.54%), Postives = 202/233 (86.70%), Query Frame = 1 
Query:    1 AVRVVSQVYHELKSVIKDKYGQDACNVGDEGGFAPNIQSNLEGIELLMAAIKKAGYEDKVVVGMDVASSEFLMPDGRYDLDFKNKGGD--QQLTGEELGQLYKDLAAKYPIVSIEDPFDQDDWANYAPFTAAVGDSVQVVGDDLLVTNPSRIVEAGEKKACNALLLKVNQIGSVTESIKAVKMSKQLGWGVMTSHRSGETEDNYIADIAVGLCTGQIKTGAPCRSERLAKYNQ 693
            A+ +  +VYH L  VIK KYGQDA NVGDEGGFAPNIQSN EG+ELLM+AI+KAGY +KV +GMDVASSEFL  DG+YDLDFKN  GD  Q LTG +L  +Y +L+ KYPIVSIEDPFDQDDWANY PFTAA+G  VQVVGDDLLVTNP RI EA +KKACNALLLKVNQIGSVTESI+AVK SK+ GWGVMTSHRSGETED+YIAD+AVGLCTGQIKTGAPCRSERLAKYNQ
Sbjct:  201 AMAIGCEVYHHLAKVIKAKYGQDAVNVGDEGGFAPNIQSNTEGVELLMSAIEKAGYLEKVKLGMDVASSEFLTKDGKYDLDFKNPQGDGKQVLTGPQLADMYMELSNKYPIVSIEDPFDQDDWANYTPFTAAIGSKVQVVGDDLLVTNPKRIKEAAQKKACNALLLKVNQIGSVTESIEAVKDSKKNGWGVMTSHRSGETEDSYIADLAVGLCTGQIKTGAPCRSERLAKYNQ 433
[Close]
BLAST of mRNA_L-elsbetiae_contig18875.5542.1 vs. uniprot
Match: A0A7S1U2I2_9STRA (Phosphopyruvate hydratase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2I2_9STRA)

HSP 1 Score: 368 bits (944), Expect = 4.650e-124
Identity = 179/233 (76.82%), Postives = 203/233 (87.12%), Query Frame = 1 
Query:    1 AVRVVSQVYHELKSVIKDKYGQDACNVGDEGGFAPNIQSNLEGIELLMAAIKKAGYEDKVVVGMDVASSEFLMPDGRYDLDFKNKGGD--QQLTGEELGQLYKDLAAKYPIVSIEDPFDQDDWANYAPFTAAVGDSVQVVGDDLLVTNPSRIVEAGEKKACNALLLKVNQIGSVTESIKAVKMSKQLGWGVMTSHRSGETEDNYIADIAVGLCTGQIKTGAPCRSERLAKYNQ 693
            A+++ ++VYH L+ VIK KYG DA NVGDEGGFAP IQSN+EG+ELLM +I KAGY  KV +GMDVASSEF  PDGRYDLDFK K  D  + +TGE+LG LYKDL  ++PI+SIEDPFD+DDW NY+PFTAA+GD VQVVGDDLLVTN ++I EA EKKACNALLLKVNQIGSVTESI+AVKMSK+ GWGVMTSHRSGETEDNYIAD+AVGLCTGQIKTGAPCRSERLAK NQ
Sbjct:  191 AMQIGTEVYHALRGVIKKKYGIDATNVGDEGGFAPGIQSNVEGVELLMESIAKAGYTGKVQIGMDVASSEFHTPDGRYDLDFKTKDNDGSEVITGEQLGDLYKDLCNQFPIISIEDPFDEDDWDNYSPFTAAIGDRVQVVGDDLLVTNVTKIAEAAEKKACNALLLKVNQIGSVTESIEAVKMSKRNGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKLNQ 423
[Close]
BLAST of mRNA_L-elsbetiae_contig18875.5542.1 vs. uniprot
Match: A0A7S2XY39_9STRA (Phosphopyruvate hydratase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY39_9STRA)

HSP 1 Score: 364 bits (935), Expect = 1.480e-122
Identity = 180/227 (79.30%), Postives = 195/227 (85.90%), Query Frame = 1 
Query:   19 QVYHELKSVIKDKYGQDACNVGDEGGFAPNIQSNLEGIELLMAAIKKAGYEDKVVVGMDVASSEFLMPDGRYDLDFK--NKGGDQQLTGEELGQLYKDLAAKYPIVSIEDPFDQDDWANYAPFTAAVGDSVQVVGDDLLVTNPSRIVEAGEKKACNALLLKVNQIGSVTESIKAVKMSKQLGWGVMTSHRSGETEDNYIADIAVGLCTGQIKTGAPCRSERLAKYNQ 693
            +VYH LK VIK KYGQDA NVGDEGGFAPNIQSN+EG+ELLM AI KAG+E KV +GMDVASSEFL  DG YDLDFK  N  G Q+++G EL  +YK L A +PIVSIEDPFDQDDWANYA F A  GD VQ+VGDDLLVTNP+RI EA EKKACNALLLKVNQIGSVTESI+AVKMSKQ GWGVM SHRSGETED+YIAD+AVGLCTGQIKTGAPCRSERLAK NQ
Sbjct:  207 EVYHNLKKVIKTKYGQDATNVGDEGGFAPNIQSNIEGVELLMEAIAKAGHEGKVKIGMDVASSEFLCKDGTYDLDFKTENNDGSQKISGPELANMYKKLMADFPIVSIEDPFDQDDWANYAAFQAECGDQVQIVGDDLLVTNPARIAEATEKKACNALLLKVNQIGSVTESIEAVKMSKQNGWGVMASHRSGETEDSYIADLAVGLCTGQIKTGAPCRSERLAKLNQ 433
[Close]
BLAST of mRNA_L-elsbetiae_contig18875.5542.1 vs. uniprot
Match: A0A7R9YBD1_9STRA (Phosphopyruvate hydratase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBD1_9STRA)

HSP 1 Score: 363 bits (931), Expect = 9.280e-122
Identity = 178/233 (76.39%), Postives = 199/233 (85.41%), Query Frame = 1 
Query:    1 AVRVVSQVYHELKSVIKDKYGQDACNVGDEGGFAPNIQSNLEGIELLMAAIKKAGYEDKVVVGMDVASSEFLMPDGRYDLDFKNKGGD--QQLTGEELGQLYKDLAAKYPIVSIEDPFDQDDWANYAPFTAAVGDSVQVVGDDLLVTNPSRIVEAGEKKACNALLLKVNQIGSVTESIKAVKMSKQLGWGVMTSHRSGETEDNYIADIAVGLCTGQIKTGAPCRSERLAKYNQ 693
            A+++  +VYH LK VIK KYGQDA NVGDEGGFAP IQSN+EG++LLM +I KAGY   V +GMDVASSEFL  DGRYDLDFK +  D  + +TGE+LG+LYKDL +++PIVSIEDPFDQDDW NY PFT A+G  VQVVGDDLLVTN  RI EA +KKACNALLLKVNQIGSV+ESI AVKMSKQ GWGVMTSHRSGETEDNYIAD+AVGLCTGQIKTGAPCRSERLAK NQ
Sbjct:  215 AMQMGCEVYHTLKGVIKAKYGQDATNVGDEGGFAPGIQSNIEGVDLLMESISKAGYSGLVEIGMDVASSEFLTKDGRYDLDFKTQPNDGAEVITGEQLGELYKDLCSQFPIVSIEDPFDQDDWDNYVPFTEAIGSKVQVVGDDLLVTNVKRIQEAADKKACNALLLKVNQIGSVSESINAVKMSKQNGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKLNQ 447
[Close]
BLAST of mRNA_L-elsbetiae_contig18875.5542.1 vs. uniprot
Match: H3GAG9_PHYRM (Phosphopyruvate hydratase n=24 Tax=Peronosporaceae TaxID=4777 RepID=H3GAG9_PHYRM)

HSP 1 Score: 360 bits (925), Expect = 6.420e-121
Identity = 171/225 (76.00%), Postives = 197/225 (87.56%), Query Frame = 1 
Query:   19 QVYHELKSVIKDKYGQDACNVGDEGGFAPNIQSNLEGIELLMAAIKKAGYEDKVVVGMDVASSEFLMPDGRYDLDFKNKGGDQQLTGEELGQLYKDLAAKYPIVSIEDPFDQDDWANYAPFTAAVGDSVQVVGDDLLVTNPSRIVEAGEKKACNALLLKVNQIGSVTESIKAVKMSKQLGWGVMTSHRSGETEDNYIADIAVGLCTGQIKTGAPCRSERLAKYNQ 693
            +VYH+LKSVIK KYGQDA NVGDEGGFAPNIQSN EG+ELLM AI +AGY+ K+ +GMDVASSEFL  +G+YDLDFK +G    LTGEELGQLYKDLA ++PI+SIEDPFDQDDW +Y+ FTA +G+ VQ+VGDDLL TNP RI  A +KKACNALLLKVNQIGSVTES+ AV ++++ GWGVMTSHRSGETED+YIAD+AVGL TGQIKTGAPCRSERLAKYNQ
Sbjct:  219 EVYHQLKSVIKKKYGQDATNVGDEGGFAPNIQSNREGVELLMTAIGRAGYDGKIGIGMDVASSEFLTKEGKYDLDFKTEGSTDLLTGEELGQLYKDLAKEFPIISIEDPFDQDDWTHYSSFTAGIGEKVQIVGDDLLCTNPKRIATALDKKACNALLLKVNQIGSVTESVDAVALAQKNGWGVMTSHRSGETEDSYIADLAVGLATGQIKTGAPCRSERLAKYNQ 443
[Close]
BLAST of mRNA_L-elsbetiae_contig18875.5542.1 vs. uniprot
Match: M4BIX8_HYAAE (Phosphopyruvate hydratase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BIX8_HYAAE)

HSP 1 Score: 360 bits (924), Expect = 6.850e-121
Identity = 173/225 (76.89%), Postives = 196/225 (87.11%), Query Frame = 1 
Query:   19 QVYHELKSVIKDKYGQDACNVGDEGGFAPNIQSNLEGIELLMAAIKKAGYEDKVVVGMDVASSEFLMPDGRYDLDFKNKGGDQQLTGEELGQLYKDLAAKYPIVSIEDPFDQDDWANYAPFTAAVGDSVQVVGDDLLVTNPSRIVEAGEKKACNALLLKVNQIGSVTESIKAVKMSKQLGWGVMTSHRSGETEDNYIADIAVGLCTGQIKTGAPCRSERLAKYNQ 693
            +VYH LK+VIK KYGQDA NVGDEGGFAPNIQSN EG+ELLM AI +AGY+ K+ +GMDVASSEFL  DG+YDLDFK++     L+GEELGQLYKDLA ++PIVSIEDPFDQDDW +Y+ FT A+GD VQVVGDDLL TNP RI  A +KKACNALLLKVNQIGSVTESI AV ++++ GWGVMTSHRSGETED+YIAD+AVGL TGQIKTGAPCRSERLAKYNQ
Sbjct:  210 EVYHHLKTVIKQKYGQDATNVGDEGGFAPNIQSNREGVELLMTAINRAGYDGKIGIGMDVASSEFLTKDGKYDLDFKSENSTDLLSGEELGQLYKDLATEFPIVSIEDPFDQDDWTHYSAFTNAIGDKVQVVGDDLLCTNPKRIATALDKKACNALLLKVNQIGSVTESIDAVALAQKNGWGVMTSHRSGETEDSYIADLAVGLATGQIKTGAPCRSERLAKYNQ 434
[Close]
BLAST of mRNA_L-elsbetiae_contig18875.5542.1 vs. uniprot
Match: A0A7S3LZG5_9STRA (Phosphopyruvate hydratase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZG5_9STRA)

HSP 1 Score: 359 bits (921), Expect = 1.890e-120
Identity = 178/233 (76.39%), Postives = 199/233 (85.41%), Query Frame = 1 
Query:    1 AVRVVSQVYHELKSVIKDKYGQDACNVGDEGGFAPNIQSNLEGIELLMAAIKKAGYEDKVVVGMDVASSEFLMPDGRYDLDFKNKGGDQQL--TGEELGQLYKDLAAKYPIVSIEDPFDQDDWANYAPFTAAVGDSVQVVGDDLLVTNPSRIVEAGEKKACNALLLKVNQIGSVTESIKAVKMSKQLGWGVMTSHRSGETEDNYIADIAVGLCTGQIKTGAPCRSERLAKYNQ 693
            A+ +  +VYH LKSVIK KYGQDACNVGDEGGFAP+IQSN EG++LL+ AIK+AGYE +V +GMDVA+SEFL  DG+YDLDFK+   D  +  TG EL   + DL  KYPIVS+EDPFDQDDWANYA FT A+G +VQVVGDDLLVTN SRI EA EKKACNALLLKVNQIGSVTESI AVK++K  GWGVMTSHRSGETEDNYIAD+AVGLCTGQIKTGAPCRSERLAKYNQ
Sbjct:  199 AMTMGCEVYHTLKSVIKKKYGQDACNVGDEGGFAPSIQSNYEGVDLLVEAIKQAGYEKEVKIGMDVAASEFLTKDGKYDLDFKSTKNDGSMVQTGPELAATFIDLCNKYPIVSVEDPFDQDDWANYAAFTKAIGKNVQVVGDDLLVTNVSRIGEAVEKKACNALLLKVNQIGSVTESIAAVKLAKSNGWGVMTSHRSGETEDNYIADLAVGLCTGQIKTGAPCRSERLAKYNQ 431
[Close]
BLAST of mRNA_L-elsbetiae_contig18875.5542.1 vs. uniprot
Match: A0A662WU36_9STRA (Phosphopyruvate hydratase n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A662WU36_9STRA)

HSP 1 Score: 356 bits (914), Expect = 2.100e-119
Identity = 170/231 (73.59%), Postives = 199/231 (86.15%), Query Frame = 1 
Query:    1 AVRVVSQVYHELKSVIKDKYGQDACNVGDEGGFAPNIQSNLEGIELLMAAIKKAGYEDKVVVGMDVASSEFLMPDGRYDLDFKNKGGDQQLTGEELGQLYKDLAAKYPIVSIEDPFDQDDWANYAPFTAAVGDSVQVVGDDLLVTNPSRIVEAGEKKACNALLLKVNQIGSVTESIKAVKMSKQLGWGVMTSHRSGETEDNYIADIAVGLCTGQIKTGAPCRSERLAKYNQ 693
            A+ +  +VYH+LKSVIK KYGQDA NVGDEGGFAPNIQSN EG+ELLM AI +AGY+ K+ +GMDVASSEF   +G+YDLDFK +G    LTGEELGQLY+DLA ++PI+SIEDPFDQDDWA+Y+ FT ++G+ VQ+VGDDLL TNP RI  A EK ACNALLLKVNQIGSVTES+ AV ++++ GWGVMTSHRSGETED+YIAD+AVGL TGQIKTGAPCRSERLAKYNQ
Sbjct:  202 AMAMGCEVYHQLKSVIKKKYGQDATNVGDEGGFAPNIQSNREGVELLMTAIGRAGYDGKIGIGMDVASSEFYTAEGKYDLDFKTEGATDLLTGEELGQLYQDLAKEFPIISIEDPFDQDDWAHYSAFTKSIGEKVQIVGDDLLCTNPKRIATALEKSACNALLLKVNQIGSVTESVDAVALAQKNGWGVMTSHRSGETEDSYIADLAVGLSTGQIKTGAPCRSERLAKYNQ 432
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18875.5542.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYQ9_ECTSI7.670e-15695.67Phosphopyruvate hydratase n=1 Tax=Ectocarpus silic... [more]
A0A835Z9Q8_9STRA2.210e-14087.01Phosphopyruvate hydratase n=1 Tax=Tribonema minus ... [more]
W7TR29_9STRA5.570e-12578.54Phosphopyruvate hydratase n=2 Tax=Monodopsidaceae ... [more]
A0A7S1U2I2_9STRA4.650e-12476.82Phosphopyruvate hydratase n=1 Tax=Phaeomonas parva... [more]
A0A7S2XY39_9STRA1.480e-12279.30Phosphopyruvate hydratase n=1 Tax=Fibrocapsa japon... [more]
A0A7R9YBD1_9STRA9.280e-12276.39Phosphopyruvate hydratase n=1 Tax=Pinguiococcus py... [more]
H3GAG9_PHYRM6.420e-12176.00Phosphopyruvate hydratase n=24 Tax=Peronosporaceae... [more]
M4BIX8_HYAAE6.850e-12176.89Phosphopyruvate hydratase n=1 Tax=Hyaloperonospora... [more]
A0A7S3LZG5_9STRA1.890e-12076.39Phosphopyruvate hydratase n=1 Tax=Spumella elongat... [more]
A0A662WU36_9STRA2.100e-11973.59Phosphopyruvate hydratase n=2 Tax=Peronosporaceae ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18875contigL-elsbetiae_contig18875:234..2423 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score447.2
Seed ortholog evalue4.6e-123
Seed eggNOG ortholog2880.D7FYQ9
Preferred nameENO1
KEGG rclassRC00349
KEGG koko:K01689
KEGG ReactionR00658
KEGG Pathwayko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066
KEGG ModuleM00001,M00002,M00003,M00346,M00394
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphopyruvate hydratase activity
EggNOG OGsCOG0148@1,KOG2670@2759
EC4.2.1.11
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019,ko04147
Ec32 ortholog descriptionenolase
Ec32 orthologEc-26_004120.1
Exons3
Model size693
Cds size693
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18875.5542.1prot_L-elsbetiae_contig18875.5542.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig18875 234..2423 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815785.1979005-CDS-L-elsbetiae_contig18875:233..4101622815785.1979005-CDS-L-elsbetiae_contig18875:233..410Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18875 234..410 +
1691683100.9651065-CDS-L-elsbetiae_contig18875:233..4101691683100.9651065-CDS-L-elsbetiae_contig18875:233..410Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18875 234..410 +
1622815785.2130108-CDS-L-elsbetiae_contig18875:1157..14751622815785.2130108-CDS-L-elsbetiae_contig18875:1157..1475Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18875 1158..1475 +
1691683100.9772055-CDS-L-elsbetiae_contig18875:1157..14751691683100.9772055-CDS-L-elsbetiae_contig18875:1157..1475Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18875 1158..1475 +
1622815785.2225318-CDS-L-elsbetiae_contig18875:2225..24231622815785.2225318-CDS-L-elsbetiae_contig18875:2225..2423Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18875 2226..2423 +
1691683100.986318-CDS-L-elsbetiae_contig18875:2225..24231691683100.986318-CDS-L-elsbetiae_contig18875:2225..2423Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18875 2226..2423 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig18875.5542.1

>prot_L-elsbetiae_contig18875.5542.1 ID=prot_L-elsbetiae_contig18875.5542.1|Name=mRNA_L-elsbetiae_contig18875.5542.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=231bp
AVRVVSQVYHELKSVIKDKYGQDACNVGDEGGFAPNIQSNLEGIELLMAA
IKKAGYEDKVVVGMDVASSEFLMPDGRYDLDFKNKGGDQQLTGEELGQLY
KDLAAKYPIVSIEDPFDQDDWANYAPFTAAVGDSVQVVGDDLLVTNPSRI
VEAGEKKACNALLLKVNQIGSVTESIKAVKMSKQLGWGVMTSHRSGETED
NYIADIAVGLCTGQIKTGAPCRSERLAKYNQ
back to top

mRNA from alignment at L-elsbetiae_contig18875:234..2423+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig18875.5542.1 ID=mRNA_L-elsbetiae_contig18875.5542.1|Name=mRNA_L-elsbetiae_contig18875.5542.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2190bp|location=Sequence derived from alignment at L-elsbetiae_contig18875:234..2423+ (Laminarionema elsbetiae ELsaHSoW15)
GCTGTCCGGGTTGTGTCCCAGGTATACCACGAGCTCAAGTCCGTGATCAA
GGACAAGTACGGCCAGGACGCGTGCAACGTGGGGGACGAGGGGGGCTTCG
CGCCCAACATCCAGAGCAACCTCGAGGGGATCGAACTGCTGATGGCGGCG
ATCAAGAAGGCCGGCTACGAGGACAAGGTGAGAGCGCCTCCCAGGAGAAA
GGCCGACGCAGAGAGGGTTGACAGCTGGAGCGGCCGCGGAGGGGGTGGGG
GGGGGGAGTAGAGAAGGCAGGGACAAACGCAACTACGATTTTCCTTCCTC
TCTCCCTCCTTCTTTCTCTGTATCTGTCGTTGAGAGCGTGTAGAGATGTG
GGGGGGGCGTCAGGCAGCCTGTGGAAGTGTGCAGGAGGCCTTGAGTCGAC
CGATGGTTTCAGCTTGTCTTTTCGCTCTACAAATTATCGTGTGTTGTACA
TACAGGGAGGAGGGAAAGCCTTTGGATGGACGGACGGGGATGGGTGGGTT
CCTCCGGTCTCTTTTGAGCTGCCCGCATGTTGCTACATCGCAAATCGCGG
CAAGAGTTTTTTCGCAGAAGGCGATGCGACTTCCGTGGCAGTGTTGCTGC
GCGGCGCGATGACGACGACAAGCAACCCAACACCAACAAATCTGTCCTCC
AGAAACGATGAGCTGGAAACGCCGAACATCAAATATCCCCTCGATAAATA
CGCCCCCCCCCCCCCCCCCCCCGACACCCCGAAGGGAGAGAGGACGGCGC
TCTTATACCCCGAAATACATGCATACATAGTAAAAAAGATTCCAAATGGG
CAGCAAGGCAAGCAAAGCAAGCAAGCAACCCACCCGCCTACCCACCCACC
CACCCCACCCCCTTGCCTCCTCCAAACCACGTGTAACGAAAATATATAAA
TATTAAATATATTTCTATATGCAGGTGGTGGTGGGCATGGACGTGGCCTC
CTCGGAGTTCCTCATGCCCGACGGGCGCTACGACCTCGACTTCAAGAACA
AGGGCGGCGACCAGCAGCTCACCGGCGAGGAGCTGGGGCAGCTGTACAAG
GACCTGGCCGCCAAGTACCCGATCGTGTCGATCGAGGACCCCTTCGACCA
GGACGACTGGGCTAACTACGCGCCCTTCACGGCGGCCGTGGGCGACAGCG
TGCAGGTGGTCGGCGACGACCTGCTGGTGACCAACCCGTCCCGCATCGTC
GAGGCCGGCGAGAAGAAGGCGTGCAACGCGCTCCTCCTCAAGGTGCGTGC
GTGTGCTGTTGTGTACTTGTTGGTGTGCTGTGTTGTTGTTGTTGTTGTTT
CTTCACATTGGCTCGTATAATCGAGATTGCTAACTCCAAAAATCTAGCAA
CTCACGGCCCGTGGTCACAGAAGTGCTAGAGCCATCAGAAGATCCGAAAA
AGGACATACGCAGATCCACCGGGCAAGGGTACACCGTGTGTGTGTGTATT
GGGAGGTTCAAGAACGTCAGTTTTTTTCGTGTCTTGTGTCGGGGGGTATT
TAGATATGCACCATCCCTGAAATCGTGGAGGTGTCTGCTGGAATCTTTGA
TGGGCCGTTTATTTTTTGCGCGCCGGGGGTATTTGAGTGGGCGTTTAGTG
TGTTTTTGGTTGGTTTTGTTGTGGGGTCGAGCATATCATGGAATCTTGTT
GGGTGTGTGTGTGTGTTGGGTGCCACGCCCCGATCGTCTTATTAGATGCG
CCCGCCGCTTCCGGTGCACTTGACGGGGAGGGCATGAGAGATTTCGCTTG
TTTTGAGCATGTGCGGGTGAATTCTGATACTACACCAGTTCGTTCGACCA
CCAGCCCGCCCGCTGGCGCCCGGCTCACGCGCTGGGTTAAATGTACTTCA
GCGACCCTCTTTTGATCCCTTCTCCTGCCGCCCGCCCGTAAACCCGGAAC
CTGCAACAACCACCCCAACCATCATCTTACTTGCACTTTTTTTTGTGTCT
TATTTATGAACTCACCACACAATTGACTAAAAATAAAAACAGGTGAACCA
GATCGGATCCGTCACGGAGTCGATCAAGGCCGTGAAGATGTCCAAGCAGC
TGGGCTGGGGCGTGATGACCTCGCACCGGTCGGGCGAGACGGAGGACAAC
TACATCGCCGACATCGCGGTGGGGCTGTGCACGGGGCAGATCAAGACGGG
TGCACCCTGCCGGTCGGAGCGTCTCGCCAAATACAACCAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig18875:234..2423+

>mRNA_L-elsbetiae_contig18875.5542.1 ID=mRNA_L-elsbetiae_contig18875.5542.1|Name=mRNA_L-elsbetiae_contig18875.5542.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1386bp|location=Sequence derived from alignment at L-elsbetiae_contig18875:234..2423+ (Laminarionema elsbetiae ELsaHSoW15)
GCTGTCCGGGTTGTGTCCCAGGTATACCACGAGCTCAAGTCCGTGATCAA
GGACAAGTACGGCCAGGACGCGTGCAACGTGGGGGACGAGGGGGGCTTCG
CGCCCAACATCCAGAGCAACCTCGAGGGGATCGAACTGCTGATGGCGGCG
ATCAAGAAGGCCGGCTACGAGGACAAGGCTGTCCGGGTTGTGTCCCAGGT
ATACCACGAGCTCAAGTCCGTGATCAAGGACAAGTACGGCCAGGACGCGT
GCAACGTGGGGGACGAGGGGGGCTTCGCGCCCAACATCCAGAGCAACCTC
GAGGGGATCGAACTGCTGATGGCGGCGATCAAGAAGGCCGGCTACGAGGA
CAAGGTGGTGGTGGGCATGGACGTGGCCTCCTCGGAGTTCCTCATGCCCG
ACGGGCGCTACGACCTCGACTTCAAGAACAAGGGCGGCGACCAGCAGCTC
ACCGGCGAGGAGCTGGGGCAGCTGTACAAGGACCTGGCCGCCAAGTACCC
GATCGTGTCGATCGAGGACCCCTTCGACCAGGACGACTGGGCTAACTACG
CGCCCTTCACGGCGGCCGTGGGCGACAGCGTGCAGGTGGTCGGCGACGAC
CTGCTGGTGACCAACCCGTCCCGCATCGTCGAGGCCGGCGAGAAGAAGGC
GTGCAACGCGCTCCTCCTCAAGGTGGTGGTGGGCATGGACGTGGCCTCCT
CGGAGTTCCTCATGCCCGACGGGCGCTACGACCTCGACTTCAAGAACAAG
GGCGGCGACCAGCAGCTCACCGGCGAGGAGCTGGGGCAGCTGTACAAGGA
CCTGGCCGCCAAGTACCCGATCGTGTCGATCGAGGACCCCTTCGACCAGG
ACGACTGGGCTAACTACGCGCCCTTCACGGCGGCCGTGGGCGACAGCGTG
CAGGTGGTCGGCGACGACCTGCTGGTGACCAACCCGTCCCGCATCGTCGA
GGCCGGCGAGAAGAAGGCGTGCAACGCGCTCCTCCTCAAGGTGAACCAGA
TCGGATCCGTCACGGAGTCGATCAAGGCCGTGAAGATGTCCAAGCAGCTG
GGCTGGGGCGTGATGACCTCGCACCGGTCGGGCGAGACGGAGGACAACTA
CATCGCCGACATCGCGGTGGGGCTGTGCACGGGGCAGATCAAGACGGGTG
CACCCTGCCGGTCGGAGCGTCTCGCCAAATACAACCAGGTGAACCAGATC
GGATCCGTCACGGAGTCGATCAAGGCCGTGAAGATGTCCAAGCAGCTGGG
CTGGGGCGTGATGACCTCGCACCGGTCGGGCGAGACGGAGGACAACTACA
TCGCCGACATCGCGGTGGGGCTGTGCACGGGGCAGATCAAGACGGGTGCA
CCCTGCCGGTCGGAGCGTCTCGCCAAATACAACCAG
back to top