mRNA_L-elsbetiae_contig18861.5539.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18861.5539.1 vs. uniprot
Match: D8LD05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD05_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 2.190e-20 Identity = 49/73 (67.12%), Postives = 56/73 (76.71%), Query Frame = 1 Query: 7 QVLGPGFGSFYGTFVPMAKEIISCAAAAPAGVPPGSPLSEDTDTDLLRGKAMEAIALMGQAVGLEVFREDAHQ 225 QVLGP FGSFYGTFVP+AKEII A A P G + + D D +RGKA+EAIALMGQAVGL++FREDAHQ Sbjct: 186 QVLGPEFGSFYGTFVPLAKEIIF-AGATPTGPAAAAAATPSEDMDAVRGKAVEAIALMGQAVGLDLFREDAHQ 257
BLAST of mRNA_L-elsbetiae_contig18861.5539.1 vs. uniprot
Match: D7FNE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE2_ECTSI) HSP 1 Score: 63.5 bits (153), Expect = 5.880e-10 Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 1 Query: 133 DTDLLRGKAMEAIALMGQAVGLEVFREDAHQ 225 DTDLLRGKAMEAIALMGQAVGLEVFREDAHQ Sbjct: 525 DTDLLRGKAMEAIALMGQAVGLEVFREDAHQ 555
BLAST of mRNA_L-elsbetiae_contig18861.5539.1 vs. uniprot
Match: A0A7S3PRL9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PRL9_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 1.700e-8 Identity = 30/75 (40.00%), Postives = 42/75 (56.00%), Query Frame = 1 Query: 1 LSQVLGPGFGSFYGTFVPMAKEIISCAAAAPAGVPPGSPLSEDTDTDLLRGKAMEAIALMGQAVGLEVFREDAHQ 225 L+QV+G FG +Y F+P+AK +++ G + T+ LRGKAM+ + LMGQAV E F DA Q Sbjct: 31 LAQVIGASFGMYYDHFMPLAKSLVAAKDLPNTG---------EEGTETLRGKAMDCVGLMGQAVAKEKFEPDAKQ 96
BLAST of mRNA_L-elsbetiae_contig18861.5539.1 vs. uniprot
Match: A0A5D6XWI5_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWI5_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 3.050e-7 Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 1 Query: 1 LSQVLGPGFGSFYGTFVPMAKEIISCAAAAPAGVPPGSPLSEDTDTDLLRGKAMEAIALMGQAVGLEVFREDAHQASE 234 +++V+G F FY F+P+AK+++ A+ A + LLRGKAME+IAL+GQAVG E F DA + E Sbjct: 519 VAKVIGADFARFYDIFIPLAKDVLVHASGA--------------EFALLRGKAMESIALIGQAVGKERFAGDAKEVME 582
BLAST of mRNA_L-elsbetiae_contig18861.5539.1 vs. uniprot
Match: A0A8K1FGX3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FGX3_PYTOL) HSP 1 Score: 55.1 bits (131), Expect = 5.700e-7 Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 1 Query: 1 LSQVLGPGFGSFYGTFVPMAKEIISCAAAAPAGVPPGSPLSEDTDTDLLRGKAMEAIALMGQAVGLEVFREDAHQASE 234 +++V+G F +Y F+P+AK+++ A+ A G LLRGKAME+IAL+GQAVG E F DA Q E Sbjct: 518 VAKVIGEEFDRYYEIFMPLAKDVLVNASGAEYG--------------LLRGKAMESIALIGQAVGKERFVADAKQVME 581
BLAST of mRNA_L-elsbetiae_contig18861.5539.1 vs. uniprot
Match: A0A2D4CEF5_PYTIN (Importin-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEF5_PYTIN) HSP 1 Score: 53.9 bits (128), Expect = 1.430e-6 Identity = 32/78 (41.03%), Postives = 44/78 (56.41%), Query Frame = 1 Query: 1 LSQVLGPGFGSFYGTFVPMAKEIISCAAAAPAGVPPGSPLSEDTDTDLLRGKAMEAIALMGQAVGLEVFREDAHQASE 234 +++V+G F FY F+P+A +++ A A + LLRGKAME+IAL+GQAVG E F EDA E Sbjct: 518 VAKVIGADFERFYSIFMPLAMDVLKNAQGA--------------EYALLRGKAMESIALIGQAVGKERFAEDAKAVME 581
BLAST of mRNA_L-elsbetiae_contig18861.5539.1 vs. uniprot
Match: F0W5X9_9STRA (Importinlike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W5X9_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 1.460e-6 Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 1 Query: 1 LSQVLGPGFGSFYGTFVPMAKEIISCAAAAPAGVPPGSPLSEDTDTDLLRGKAMEAIALMGQAVGLEVFREDAHQASE 234 +++V+G GF ++Y F+P+AK ++ A+ GS S LLRGK+ME IAL+GQAVG + F DA + E Sbjct: 518 VAKVIGSGFDAYYDIFIPVAKNVLIHAS--------GSEFS------LLRGKSMETIALIGQAVGKDRFLNDAKEVME 581
BLAST of mRNA_L-elsbetiae_contig18861.5539.1 vs. uniprot
Match: A0A024G4G4_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G4G4_9STRA) HSP 1 Score: 53.5 bits (127), Expect = 1.990e-6 Identity = 32/78 (41.03%), Postives = 46/78 (58.97%), Query Frame = 1 Query: 1 LSQVLGPGFGSFYGTFVPMAKEIISCAAAAPAGVPPGSPLSEDTDTDLLRGKAMEAIALMGQAVGLEVFREDAHQASE 234 +++V+G GF ++Y F+P+AK ++ A GS S LLRGK+ME IAL+GQAVG + F DA + E Sbjct: 518 VAKVIGAGFDAYYDIFIPVAKNVLVHAI--------GSEFS------LLRGKSMETIALIGQAVGKDRFLNDAREVME 581
BLAST of mRNA_L-elsbetiae_contig18861.5539.1 vs. uniprot
Match: A0A6G0X6P6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X6P6_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 2.720e-6 Identity = 29/73 (39.73%), Postives = 43/73 (58.90%), Query Frame = 1 Query: 1 LSQVLGPGFGSFYGTFVPMAKEIISCAAAAPAGVPPGSPLSEDTDTDLLRGKAMEAIALMGQAVGLEVFREDA 219 +++V+G F +Y F+P+AK++++ A P LLRGKAME +AL+GQAVG + F EDA Sbjct: 513 VAKVVGDAFVLYYNVFMPVAKQVLTQAHGKPYA--------------LLRGKAMECVALIGQAVGKQAFLEDA 571
BLAST of mRNA_L-elsbetiae_contig18861.5539.1 vs. uniprot
Match: H3GNL8_PHYRM (Uncharacterized protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=H3GNL8_PHYRM) HSP 1 Score: 52.8 bits (125), Expect = 3.720e-6 Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 1 Query: 1 LSQVLGPGFGSFYGTFVPMAKEIISCAAAAPAGVPPGSPLSEDTDTDLLRGKAMEAIALMGQAVGLEVFREDAHQASE 234 +++V+G F FY F+P+AKE+++ A + LLRGK+ME+IAL+GQAVG E F DA + E Sbjct: 518 VAKVIGDEFLRFYDIFIPLAKEVLTNA--------------HGKEYSLLRGKSMESIALIGQAVGKERFVNDAKEIME 581 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18861.5539.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18861.5539.1 >prot_L-elsbetiae_contig18861.5539.1 ID=prot_L-elsbetiae_contig18861.5539.1|Name=mRNA_L-elsbetiae_contig18861.5539.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=78bp LSQVLGPGFGSFYGTFVPMAKEIISCAAAAPAGVPPGSPLSEDTDTDLLRback to top mRNA from alignment at L-elsbetiae_contig18861:1648..1881+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18861.5539.1 ID=mRNA_L-elsbetiae_contig18861.5539.1|Name=mRNA_L-elsbetiae_contig18861.5539.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=234bp|location=Sequence derived from alignment at L-elsbetiae_contig18861:1648..1881+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18861:1648..1881+ >mRNA_L-elsbetiae_contig18861.5539.1 ID=mRNA_L-elsbetiae_contig18861.5539.1|Name=mRNA_L-elsbetiae_contig18861.5539.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=468bp|location=Sequence derived from alignment at L-elsbetiae_contig18861:1648..1881+ (Laminarionema elsbetiae ELsaHSoW15)back to top |