prot_L-elsbetiae_contig1886.5537.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1886.5537.1
Unique Name	prot_L-elsbetiae_contig1886.5537.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	295

Homology

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BLAST of mRNA_L-elsbetiae_contig1886.5537.1 vs. uniprot
Match: D8LR38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR38_ECTSI)

HSP 1 Score: 392 bits (1006), Expect = 4.700e-121
Identity = 215/299 (71.91%), Postives = 240/299 (80.27%), Query Frame = 0

Query:    1 MVATANAKLRDATEQLRDVLLHRLRSEARIADMEKRLAVVKANRQKYAEDHARLTHEIDLFYYTKRDSQVVTPIGWATVNSYREEDQMLSVTLPFCRPLARMWIPVEKVWQLDRAGQQAETVGMEAEDVQCRLLFRNERVTIARECGRMLTEEQATREMMREEADIADEKRLAAKIVAQAKVAAPRLATMSAISEHRNRWVAYKVQKAVEQRERDIAKWATKTEGGADDDSLDTTTKPRKVKGALERALMASRFRTEFVDIYIETYVKNAE---LRVAKVPDTRVPDE--FLRADISHL 294
            +VATANAKLRDAT+QLRDVLLHRLRSEARI  MEKRLAVVK NR KYAEDHARLTHEI+LFYYTKRDSQVVTPIGWATVNSYREEDQML VTLPFCRP ARMWIPVEKVWQ+DRAGQQAE+VGMEAED+ CRLL+R ERVT+ RE G +LTEE  TREMMREEA+IADEKRLAAK+VAQAKV  PRLATMSAISEHRNRWVAYKVQKAVEQRE+DIAKW  KT+GG D+DSL++  KPRK+     +    +      +  Y+  +VK+     LR       R  DE   +  D SH+
Sbjct: 1710 LVATANAKLRDATDQLRDVLLHRLRSEARIEAMEKRLAVVKENRHKYAEDHARLTHEIELFYYTKRDSQVVTPIGWATVNSYREEDQMLIVTLPFCRPSARMWIPVEKVWQMDRAGQQAESVGMEAEDIHCRLLYRTERVTMTRERGNVLTEELKTREMMREEAEIADEKRLAAKMVAQAKVTGPRLATMSAISEHRNRWVAYKVQKAVEQREKDIAKWNAKTKGGDDEDSLESNPKPRKMLELRAKDRAEATILDHIIGTYLSEFVKDVAQETLRAGLQAKRRAEDETGLVFPDPSHM 2008

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1886.5537.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1886.5537.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LR38_ECTSI	4.700e-121	71.91	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 150..172
None	No IPR available	COILS	Coil	Coil	coord: 30..50

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1886	contig	L-elsbetiae_contig1886:1228..3607 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1886.5537.1	mRNA_L-elsbetiae_contig1886.5537.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1886 1228..3613 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1886.5537.1 ID=prot_L-elsbetiae_contig1886.5537.1|Name=mRNA_L-elsbetiae_contig1886.5537.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=295bp
MVATANAKLRDATEQLRDVLLHRLRSEARIADMEKRLAVVKANRQKYAED
HARLTHEIDLFYYTKRDSQVVTPIGWATVNSYREEDQMLSVTLPFCRPLA
RMWIPVEKVWQLDRAGQQAETVGMEAEDVQCRLLFRNERVTIARECGRML
TEEQATREMMREEADIADEKRLAAKIVAQAKVAAPRLATMSAISEHRNRW
VAYKVQKAVEQRERDIAKWATKTEGGADDDSLDTTTKPRKVKGALERALM
ASRFRTEFVDIYIETYVKNAELRVAKVPDTRVPDEFLRADISHLF