mRNA_L-elsbetiae_contig1884.5529.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1884.5529.1
Unique NamemRNA_L-elsbetiae_contig1884.5529.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1884.5529.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 3.470e-35
Identity = 146/414 (35.27%), Postives = 196/414 (47.34%), Query Frame = 1
Query:    1 LVAGASPNGSRRLVQRPLVLAAAGDRQASRDLVRFLIEKGADPDAGIRS---CDDGRDSSTLMAEGTRPLHCAVRXXXXXXXXXXXXXXXXXXXADIAGDTPLMVAARV--SAGGGPGLDAASSAAMMVWELLAAGADPRLADSLGRVALHFAVEQGHTDAIRELLLSDAPAATLNWVTEPRPLFAGAPRPPGLTPLCVAAAHGKADAVHLLLSAGAVEPKSPIEKLGKKHPILAAVEGCHEESLRILLLSDEGLAAICCGHSLADVFHFLLASAVSGKGGGFQRARMIHVILSVEGEERRSYWATLSGTHLPNMPMLHWAFLGANIPAMSVLLAAGAHEEVVDDEGKTVDVLLDKSV--LRQDDYRIKAAHRMVKRGPAFRARSWAWRVDA-----GFT-PAAPTTAQSGPLG 1203
            L AGAS +GS  L  RP++ AAA       DL   LI++ A+ D G  +   C DG +   ++ +G R LH A+                    A+  G TPLM+   +  SA G          A+M  E               + AL FA  +  TD I ++LL  AP  TLN  T           P GLTPL  AA  GK  AV  LLSAGA +P +  EK     P++AAV   H+E +R+LL +D G+ AI       DV    + +A S + G   RA ++ ++LS EG ER  +WA          P+LH A    NI A  VLLAAGA E   +++G+    ++  +   L++D  +  A  RM+ RGPA+RARSWAW   A     G T  AA TTA  G  G
Sbjct:  138 LAAGASVDGSSELDWRPIIAAAASGSVGMADL---LIKRQANVDLGSLNDLRCSDGLE---VLGKGVRALHVAINHYHVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARG-------EQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTDLI-DILLQKAPT-TLNRAT-----------PDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEK--DMCPLVAAVRENHQEVVRVLL-TDRGMEAI----DGPDVIPRAVGAAASARKG---RASIVRMLLSAEGHEREGHWARC---RYKEDPVLHCAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLARGPAYRARSWAWPATARAYTAGHTCAAAATTAAPGACG 512          
BLAST of mRNA_L-elsbetiae_contig1884.5529.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 4.480e-35
Identity = 145/411 (35.28%), Postives = 198/411 (48.18%), Query Frame = 1
Query:    1 LVAGASPNGSRRLVQRPLVLAAAGDRQASRDLVRFLIEKGADPDAGIRS---CDDGRDSSTLMAEGTRPLHCAVRXXXXXXXXXXXXXXXXXXXADIAGDTPLMVAARV--SAGGGPGLDAASSAAMMVWELLAAGADPRLADSLGRVALHFAVEQGHTDAIRELLLSDAPAATLNWVTEPRPLFAGAPRPPGLTPLCVAAAHGKADAVHLLLSAGAVEPKSPIEKLGKKHPILAAVEGCHEESLRILLLSDEGLAAICCGHSLADVFHFLLASAVSGKGGGFQRARMIHVILSVEGEERRSYWATLSGTHLPNMPMLHWAFLGANIPAMSVLLAAGAHEEVVDDEGKTVDVLLDKSV--LRQDDYRIKAAHRMVKRGPAFRARSWAWRVDA-----GFT-PAAPTTAQSG 1194
            L AGAS +GS  L  RP++ AAA  +    +L   LI++ AD D G  +   C DG +   ++ +G R LH A+                    A+  G TPLM+   +  SA G          A+M  E               + AL FA  +  T+ I ++LL  AP  TLN  T           P GLTPL  AA  GK  AV  LLSAGA +P +  EK     P++AAV   H+E +R+LL +D G+ AI      ADV    + +A S + G   RA ++ ++LS EG ER  +WA          P+LH A    NI A  VLLAAGA E   +++G+    ++  +   L++D  +  A  RM++RGPA+RARSWAW   A     G T  AA TTA  G
Sbjct:  130 LAAGASVDGSSELDWRPIIAAAASCKVGMAEL---LIKRKADVDLGSLNDLRCSDGLE---VLGKGVRALHVAINHYNVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARG-------EQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLI-DILLQKAPT-TLNRAT-----------PDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEK--DMCPLVAAVRENHQEVVRVLL-TDRGMKAI----GGADVIPRAVGAAASARKG---RASIVRMLLSAEGHEREGHWARC---RYKEDPVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLERGPAYRARSWAWPATARAYTAGHTCAAAATTAAPG 501          
BLAST of mRNA_L-elsbetiae_contig1884.5529.1 vs. uniprot
Match: D8LSK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK4_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 1.360e-26
Identity = 134/416 (32.21%), Postives = 190/416 (45.67%), Query Frame = 1
Query:    1 LVAGASPNGSRRLVQR--PLVLAAAGDRQASRDLVRFLIEKGADPDAGIRSCDDGRDSST----LMAEGTRPLHCAVRXXXXXXXXXXXXXXXXXXXADIAGD-----TPLMVAARVSAGGGPGLDAASSAAMMVWELLAAGADPRLADSLGRVALHFAVEQGHTDAIRELLLSDAPAATLNWVTEPRPLFAGAPRPPGLTPLCVAAAHGKADAVHLLLSAGAVEPKSPIEKLGKKHPILAAVEGCHEESLRILLLSDEGLAAICCGHSLADVFHFLLASAVSGKGGGFQRARMIHVILSVEGEERRSYWATLSGTHLPNMPMLHWAFLGANIPAMSVLLAAGAHEEVVDDEG----KTVDVLLDKSVLRQDDYRIKAAHRMVKRGPAFRARSWAWRVDAGFTPAAPTTAQSGPLG 1203
            L AGAS +GS    +   P+V AAA     S  +++FL++KGAD            +SST        G+R +H AV                    AD+ G      TPLM+A RV   G   ++ A        ELL AG D  L D+ GR ALH+A   G+ +A+ + LLS    +TLN  T+            G TPLCVA        V LLLSAGA +    +++     P  +A    +E  LRIL  S+ G+ A+  G   A + + L  +   GK      AR++ ++L+ EG+ER+ +WA      +   P+++ A     +  + VLLAAGA E   D +G    + +   L    L  D     A  R ++RGPA+RARSWAW V       AP    +G  G
Sbjct:   25 LAAGASIDGSPHSGEEFPPVVFAAA---VGSASMIKFLVDKGADI-----------NSSTWRPGAFPSGSRAIHVAVSSGYAGALDALRELIKAG--ADLNGRNYQGCTPLMMACRVDKEGAERVELAR-------ELLKAGVDTTLVDADGRAALHYAAYSGN-EALIQALLSKGSLSTLNLATQD-----------GKTPLCVAVEFVHCGVVSLLLSAGASQ--RGLQEGNYPCPFRSAAALGYESILRILC-SERGMDAV--GGGAAVLPNSLACATRRGK------ARILRLLLAAEGQERQEHWARRR--LVLGRPLVYLAAAYGILANVKVLLAAGADETETDPDGYAAPEVIGGQLPSGTL--DPLEAAAIGRELQRGPAYRARSWAWPVGED----APVAGDAGAAG 386          
BLAST of mRNA_L-elsbetiae_contig1884.5529.1 vs. uniprot
Match: D8LDZ2_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 1.010e-25
Identity = 136/423 (32.15%), Postives = 186/423 (43.97%), Query Frame = 1
Query:    1 LVAGASPNGSRRLVQRPLVLAAAGDRQASRDLVRFLIEKGADPDAGIRSCD---DGRDSSTLMAEGTRPLHCAVRXXXXXXXXXXXXXXXXXXXADIAGDTPLMVAARVSAGGGPGLDAASSAAMMVWELLAAGADPRLADSLGRVALHFAVEQGHTDAIRELLLSDAPAATLNWVTEPRPLFAGAPRPPGLTPLCVAAAHGKADAVHLLLSAGAVE-PKSPIEKLGKKHPILAAVEGCHEESLRILLLSDEGLAAICCGHSLADVFHFLLASAVSGKGGGFQRARMIHVILSVEGEERRSYWATLSGTHLPNMPMLHWAFLGANIPAMSVLLAAGAHEEVVD--DEGKTVDVLLDKSVLRQDDYRIKAAHRMVKRGPAFRARSWAWRVDAGFTPAAPTTAQS-----GPLGVRVFRPRTRKF 1236
            L AGA+ +G+      PL LAA   R    D+++ LI+ GAD D G  S D   DG   +     GT PLH A+                    AD  G TPLM+             A +                         ALH A      D +  LLLS AP+ T+N            P   G+T LC AA+ G   AV  LLSAGA + P      +G    +L AVE  HE+ +R+LL  D G+ A+  G  LA    + L  ++  +       R++ ++L VEGE++R  WA L   H    P LH A    ++ A S+LL AGA E   +  D+G +  V       +++     A  R+++RGPAFRARSWAW  ++   PAA  T  S       L VR+FRP   +F
Sbjct:   26 LKAGANADGTSEAATSPLFLAANRGRI---DILKLLIDNGADLD-GTSSLDKFADGFTGNLPFEGGTTPLHGALAGENLDALRLLLLAGADPNLADGKGCTPLMMTCLKY------FRAKNYVLTAXXXXXXXXXXXXXXXXXXXTALHVAATFNAPDLLG-LLLSRAPS-TVNL-----------PNKKGVTALCYAASEGMEVAVSCLLSAGARDNPSLFANGIGS---LLIAVELGHEQVVRVLL--DRGVQAV--GGELA--MSYALRRSILKRF-----PRILQMLLDVEGEQKRVKWARLR--HTDGTPALHLAAACESLVAASILLQAGADEGTANGLDKGASCCVGAALPANKKNPDTSAAVCRLLERGPAFRARSWAWAAESSEAPAASGTVCSMKGGRATLDVRIFRPTGNQF 409          
BLAST of mRNA_L-elsbetiae_contig1884.5529.1 vs. uniprot
Match: D8LME6_ECTSI (Inversin protein alternative isoform n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME6_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 1.980e-17
Identity = 135/439 (30.75%), Postives = 186/439 (42.37%), Query Frame = 1
Query:    1 LVAGASPNGSRRLVQRPLVLAAAGDRQASRDLVRFLIEKGADPDAGIRSCDDGRDSSTLMAEGTRPLHCAVRXXXXXXXXXXXXXXXXXXXA-DIAGDTPLMVAARVSAGGGPGLDAASSAAMMVWELLAAGADPRLADSLGRVALHFAVEQGHTDAIRELLLSDAPAATLNWVTEPRPLFAGAPRPPGLTPLCVAAAHGKADAVHLLLSAGAVEPKSPIEKLGKKHPILAAVEGCHEESLRILLLSDEGLAAICCGHSLADVFHFLLASAVSGKGGGFQRARMIHVILSVEGEERRSYWAT--------LSGTHLPNMPMLHWAFLGANIPAMSVLLAAGAHEEVVDDEGKTVDVLLDKSVLRQDDYRI--KAAH--RMVKRGPAFRARSWAWR-------VDAGFTPAAPTTAQSGPLGVRVFRPRTRKFLVRLIER 1257
            L AGA+ NGS RL  RPL+ AA   R  +  + + LIEKGA+ +  +         S L   G+  LH AV                    A DI G T L  A  V       LD     AM V ELL  GA        G    HFA  +G    + ELLLS+APA  +N V +    F         TP+  AA+ G+  AV  L+SAGA +      + G     +A   G     +R+LL S E L A        ++ H +  +   G+         + +++SV G+ R  YW+         LS   +  +P L  A     + +  +LL AGA E  + +  K  D+L    +L   + R   KAA   R+++R PAFRARSW W        VDAG  P         PLG ++F P  R F  +  E+
Sbjct:   23 LAAGANVNGSSRLSCRPLICAA---RWGNCKIAKRLIEKGANLELAVTDETGFGGISPLYPVGSNALHAAVSFGVEVGMIRVLLDGGANPDAQDIDGCTALANACSV-------LDPDERLAM-VRELLRGGATAFSKTFKGTSPAHFAASKGDCRLL-ELLLSEAPAM-INHVNDD---FG--------TPMAFAASTGQDKAVSFLVSAGASDEAVLSHERGSL--FMALCRG-FTNVVRVLLSSPEALKA---AGGYDEIRHAMCWAMQQGQ------PESLRLLISVGGKTR--YWSNQLVLVPGRLSDNQV-EVPALQCAVCYQCVESTKLLLEAGADERFLTNH-KPADLLGAVGLLLDAEDRDLQKAAEIVRVLRRAPAFRARSWRWPGATATPPVDAGSDPGDDAAT---PLGAQIFWPAGRNFFTKRFEK 418          
BLAST of mRNA_L-elsbetiae_contig1884.5529.1 vs. uniprot
Match: D8LMB2_ECTSI (Ankyrin repeat-containing protein 10_01 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB2_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 4.540e-15
Identity = 104/306 (33.99%), Postives = 144/306 (47.06%), Query Frame = 1
Query:  298 LMVAARVSAGGGPGLDAASSAAMMVWELLAAGADPRLADSLGRVALHFAVEQGHTDAIRELLLSDAPAATLNWVTEPRPLFAGAPRPPGLTPLCVAAAHGKADAVHLLLSAGAVEPKSPIEK-LGKKHPILAAVEGCHEESLRILLLSDEGLAAICCGHSLADVFHFLLASAVSGKGGGFQRARMIHVILSVEGEERRSYWAT-----------LSGTHLPNM-------PMLHWAFLGANIPAMSVLLAAGAHEEVVDDEGK-TVDVLLDKSVLRQDDYRI----KAAHRMVKRGPAFRARSWAW 1143
            +MVA   S+G    L+       M+  LL AGA P L   LG +A+HFA  +  T  + ELLLS AP+ TLN                G +PL  AA  G+   + LLLSAGA +      K +   H  +   +G    S+R LL  + GL A+    ++A       A AVS   G      ++ ++L+VEG E++  WA            L G   P M       P+LH+A    +IPA+ +LL+AGA  E  D +GK  VD +     L  DD R      A  +M+++GPAFR RS AW
Sbjct:    1 MMVACESSSGTSTKLE-------MLHSLLRAGAAPALEIELGALAIHFAAARCETQVV-ELLLSKAPS-TLNNADNH-----------GYSPLGAAALQGRESTLSLLLSAGASDRIVWATKGVSALHEAIGIGKG---NSVRFLL--ENGLEAVGGLPAIAG------AMAVSVWYGYID---ILEMLLNVEGGEKQEVWANQHVYFAHDGSLLRGVPGPTMATKFEWLPILHYAAKYCSIPALRILLSAGADTETCDLKGKLAVDHI---GSLLPDDKRNGSMEAAVQQMLQKGPAFRVRSRAW 269          
BLAST of mRNA_L-elsbetiae_contig1884.5529.1 vs. uniprot
Match: D8LME7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME7_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 1.710e-9
Identity = 71/205 (34.63%), Postives = 100/205 (48.78%), Query Frame = 1
Query:  367 MVWELLAAGADPRLADSLGRVALHFAVEQGHTDAIRELLLSDAPAATLNWVTEPRPLFAGAPRPPGLTPLCVAAAHGKADAVHLLLSAGAVEPKSPIEKLGKKHPILAAVEGCHEESLRILLLSDEGLAAICCGHSLADVFHFLLASAVSGKGGGFQRARMIHVILSVEGEERRSYWA-TLSGTHLPNMPMLHWAFLGANIPAMS 978
            +V ELL  GA+P L       ALH A ++GHT+    LL   A  ATLN V E            GLTPL  A + G+  AV  LLS GA + +  + +  +   +  AV   H+  L +LL   +GL A+    S+ D     +  AV+       R R ++++LSVEGEERR++WA T          MLH+A    ++ A S
Sbjct:   68 IVRELLKWGANPNLRGGPYGSALHTAAKEGHTNLFTTLLA--AAPATLNLVNEQ-----------GLTPLGTATSFGRHKAVTCLLSLGASDRQ--VFQETRSGSLQEAVVAGHDTLLSLLL--GKGLEAVGGLDSIPDA----MGCAVTKS-----RTRTLNLLLSVEGEERRTFWARTRVSDDYSGKCMLHFAAEFTSLSARS 246          
BLAST of mRNA_L-elsbetiae_contig1884.5529.1 vs. uniprot
Match: D8LMA9_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA9_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.310e-8
Identity = 100/358 (27.93%), Postives = 144/358 (40.22%), Query Frame = 1
Query:   10 GASPNGSRRLVQRPLVLAAAGDRQASRDLVRFLIEKGADPDAGIRSCDDGR---DSSTLMAEGTRPLHCAVRXXXXXXXXXXXXXXXXXXXADIAGDTPLMVAARVSAGGGPGLDAASSAAMMVWELLAAGADPRLADSLGRVALHFAVEQGHTDA-IRELLLSDAPAATLNWVTEPRPLFAGAPRPPGLTPLCVAAAHGKADAVHLLLSAGAVEPKSPIEKLGKKHPILAAVEGCHEESLRILLLSDEGLAAICCGHSLADVFHFLLASAVSGKGGGFQRARMIHVILSVEGEERRSYWA------------------TLSGTHLPNMPMLHWAFLGANIPAMSVLLAAGAHEEVVD 1017
            GAS +     V RP+ +A         D+++ L+  GAD +A   S  DG    +       G   L+ A                      D  G TP+MV     +         S+   M+  LL AGAD  + + LG +A+H A   G  DA +  LLLS AP+ TLN  T             GLTPL  AA  G    + LL S GA +   P    G      A + G    S+R LL  + GL A+     L  +   +  S   G   G +      ++L+V GE+++ +WA                  +++       P+LH+A    +IPA+ VLL+AGA  E  D
Sbjct:    5 GASVHDFGDAVVRPIAVATD---YGLIDIIKALVATGADTEAPCWSDKDGAWKGNPEWSYRNGFTALYIAPAVGNAGALLVLLQLGANPNATDSDGGTPIMVTCGTGS-------VTSTKLTMMRSLLKAGADLAVENELGGLAIHIAA--GRCDAQVVALLLSMAPS-TLNNATHN-----------GLTPLAAAAEKGNESTMSLLFSEGASD-SLPWATTGITALHKAVIVGMGT-SVRFLL--ENGLDAV---GGLPGIAEAIRISVWFGCIDGLE------MLLNVHGEKKQEFWAKHYVFGVQDDSLLGSVPFSITAILCEWYPILHYAAKHYSIPALHVLLSAGAIPETCD 325          
BLAST of mRNA_L-elsbetiae_contig1884.5529.1 vs. uniprot
Match: D8LMA6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA6_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 4.050e-8
Identity = 107/411 (26.03%), Postives = 148/411 (36.01%), Query Frame = 1
Query:    1 LVAGASPNGSRRLVQRPLVLAAAGDRQASRDLVRFLIEKGADPDAGIRSC--DDGRDSSTL----MAEGTRPLHCAVRXXXXXXXXXXXXXXXXXXXADIAGDTPLMVAARVSAGGGPGLDAASSAAMMVWELLAAGADPRLADSLGRVALHFAVEQGHTDAIRELLLSDAPAATLNWVTEPRPLFAGAPRPPGLTPLCVAAAHGKADAVHLLLSAGAVEPKSPIEKLGKKHPILAAVEGCHEESLRILLLSDEGLAAICCGHSLADVFHFLLASAVSGKGGGFQRARMIHVILSVEGEERRSYWAT-------------------LSGTHLP-----NMPMLHWAFLGANIPAMSVLLAAGAHEEVVDDEGKTVDVLLDKSVLRQDDYRIKAAHRMVKRGPAFRARSWAW 1143
            L AGAS   SR     P+ +AAA        +++ L+  GA+ +A   S    DG    T        G   LH A                     +D  G TP+M+A +      P   +  + A M+  LL AGAD  L D  G +A+HFA     T  + ELLLS AP+ TLN  T             G TPL    A                                                   G  A+    ++AD      A   S + G      M+ ++L+VEG+E++  WA                       TH         P+LH A     IPA+ VLL+AGA     D +GK  +  +      ++     A   ++ +GPAFRARSWAW
Sbjct:   27 LAAGASLRASREENIHPMAVAAA---HGHVHIIKALVRSGAEIEATCTSRVKSDGYCCETNPNWPYLNGFTALHIAAILGKVRAMLVLLQLGANPNSSDTRGVTPVMMACQGVRCCRP---STPNQAEMLNSLLKAGADVELEDGTGLLAIHFAASHCETQVV-ELLLSKAPS-TLNHATHK-----------GFTPL----AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGFEAVGGKPAIAD------AMRTSVQYGHID---MLTILLNVEGDEKQEVWANQFVYCSHETVDVGLAPARDFPSTHAIMAIAFGCPLLHTAAKYCAIPAIRVLLSAGALAGKADYQGKVAEDAIGVYHHERNGSVEAAVRALLLKGPAFRARSWAW 405          
BLAST of mRNA_L-elsbetiae_contig1884.5529.1 vs. uniprot
Match: A0A6H5K2Z0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Z0_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 3.360e-5
Identity = 82/334 (24.55%), Postives = 126/334 (37.72%), Query Frame = 1
Query:  367 MVWELLAAGADPRLADSLGRVALHFAVEQGHTDAIRELLLSDAPAATLNWVTEPRPLFAGAPRPPGLTPLCVAAAHGKADAVHLLLSAGAVEPKSPIEKLGKKHPILAAVEGCHEESLRILLLSDEGLAAICCGHSLADVFHFLLASAVSGKGGGFQRARMIHVILSVEGEERRSYWAT-------LSGTHLPNMPMLH----WAFLGAN--------------IPAMSVLLAAGAHEEVVDDEGKTVDVLLDKSVLRQDDYRIK---AAHRMVKRGPAFRARSWAW---------RVDAGFTPAAPTTAQSGPLGVRVFRPRTRKFLVRLIER 1257
            M+  LL AGAD    D  G +A+H A   G T  ++ LLLS AP+ TL   T             GLTPL  A                                                     GL A+     +AD    +L+S +      ++R  ++ ++L+VEG+E++  WA        L    L  +P+       AFL                 IPA+ VLL+AGA  E  D +G+     +  ++L  D+  +     A +++ + PAF ARSWAW         R      P+  T     P+G ++F     K + + ++R
Sbjct:  330 MLNSLLKAGADLAFEDENGSLAIHIAAGHGETQVVK-LLLSMAPS-TLKHATHA-----------GLTPLAAAXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGLEAVGGKLVIADA---MLSSVM------YKRVDILKILLNVEGDEKQEVWANQSVNCYALENERLGEVPVHEIPKACAFLATRFGGPLPYAAAMYCFIPALRVLLSAGALAEKADPKGQLAKDKIG-NLLSDDERNVDKEAVALKLLLKEPAFSARSWAWPHTMKAALGRASRNVHPSPSTPVPKTPMGAQMFNQMDEKLVSKSVDR 636          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1884.5529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5JSC7_9PHAE3.470e-3535.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSK8_ECTSI4.480e-3535.28Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LSK4_ECTSI1.360e-2632.21Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LDZ2_ECTSI1.010e-2532.15Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D8LME6_ECTSI1.980e-1730.75Inversin protein alternative isoform n=1 Tax=Ectoc... [more]
D8LMB2_ECTSI4.540e-1533.99Ankyrin repeat-containing protein 10_01 n=1 Tax=Ec... [more]
D8LME7_ECTSI1.710e-934.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMA9_ECTSI1.310e-827.93Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LMA6_ECTSI4.050e-826.03Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
A0A6H5K2Z0_9PHAE3.360e-524.55Reverse transcriptase domain-containing protein (F... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1884contigL-elsbetiae_contig1884:6351..7610 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score151.0
Seed ortholog evalue1.3e-33
Seed eggNOG ortholog2880.D8LSK8
KEGG koko:K10380
KEGG Pathwayko04624,ko05205,map04624,map05205
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Exons1
Model size1260
Cds size1260
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815784.0542622-CDS-L-elsbetiae_contig1884:6350..76101622815784.0542622-CDS-L-elsbetiae_contig1884:6350..7610Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1884 6351..7610 +
1691683100.159295-CDS-L-elsbetiae_contig1884:6350..76101691683100.159295-CDS-L-elsbetiae_contig1884:6350..7610Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1884 6351..7610 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1884.5529.1prot_L-elsbetiae_contig1884.5529.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1884 6351..7610 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1884.5529.1

>prot_L-elsbetiae_contig1884.5529.1 ID=prot_L-elsbetiae_contig1884.5529.1|Name=mRNA_L-elsbetiae_contig1884.5529.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=420bp
LVAGASPNGSRRLVQRPLVLAAAGDRQASRDLVRFLIEKGADPDAGIRSC
DDGRDSSTLMAEGTRPLHCAVRQVSLDTVRILLRAGADPDAADIAGDTPL
MVAARVSAGGGPGLDAASSAAMMVWELLAAGADPRLADSLGRVALHFAVE
QGHTDAIRELLLSDAPAATLNWVTEPRPLFAGAPRPPGLTPLCVAAAHGK
ADAVHLLLSAGAVEPKSPIEKLGKKHPILAAVEGCHEESLRILLLSDEGL
AAICCGHSLADVFHFLLASAVSGKGGGFQRARMIHVILSVEGEERRSYWA
TLSGTHLPNMPMLHWAFLGANIPAMSVLLAAGAHEEVVDDEGKTVDVLLD
KSVLRQDDYRIKAAHRMVKRGPAFRARSWAWRVDAGFTPAAPTTAQSGPL
GVRVFRPRTRKFLVRLIER*
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mRNA from alignment at L-elsbetiae_contig1884:6351..7610+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1884.5529.1 ID=mRNA_L-elsbetiae_contig1884.5529.1|Name=mRNA_L-elsbetiae_contig1884.5529.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1260bp|location=Sequence derived from alignment at L-elsbetiae_contig1884:6351..7610+ (Laminarionema elsbetiae ELsaHSoW15)
CTGGTAGCAGGTGCCAGCCCGAACGGATCCCGCCGCCTGGTTCAGAGGCC TCTCGTGCTGGCCGCCGCCGGAGATCGCCAGGCTTCACGCGATTTGGTCC GGTTCCTCATCGAGAAAGGGGCGGATCCGGACGCGGGCATTCGGAGCTGT GATGACGGGAGAGACAGCAGTACTTTGATGGCAGAGGGGACCAGGCCGCT CCACTGCGCAGTAAGACAGGTTAGTCTCGACACCGTGAGAATCCTCCTCC GGGCAGGTGCCGACCCGGATGCCGCTGACATAGCAGGCGACACTCCGCTC ATGGTGGCCGCCCGCGTGTCGGCAGGGGGCGGGCCGGGGCTAGATGCAGC CTCGTCGGCTGCCATGATGGTGTGGGAGCTTCTTGCGGCGGGGGCTGATC CCCGCTTGGCGGACTCCCTGGGAAGAGTGGCTCTGCACTTCGCGGTAGAG CAGGGGCACACCGACGCGATCAGAGAATTGTTGCTGTCGGATGCGCCGGC CGCGACACTGAACTGGGTTACCGAGCCACGGCCACTGTTTGCAGGCGCGC CCCGCCCGCCGGGCTTAACACCGCTGTGTGTAGCAGCTGCTCACGGCAAG GCAGACGCGGTGCACCTACTATTGTCGGCAGGCGCGGTGGAGCCGAAGTC TCCTATTGAGAAATTGGGCAAAAAGCATCCTATCTTGGCCGCTGTGGAGG GGTGTCACGAGGAGTCGTTGCGCATCCTGTTGTTGTCAGATGAAGGCCTG GCGGCGATCTGCTGTGGCCATTCACTCGCCGATGTATTTCACTTTTTGCT TGCATCTGCAGTTTCCGGCAAGGGGGGCGGATTTCAGAGGGCGAGAATGA TCCACGTGATACTGTCGGTTGAGGGAGAAGAGAGGCGGTCGTACTGGGCA ACGCTCTCGGGTACGCACCTGCCTAATATGCCTATGCTGCACTGGGCCTT TCTGGGCGCTAATATCCCGGCCATGAGTGTACTGCTGGCAGCCGGAGCAC ACGAGGAAGTGGTCGACGATGAGGGGAAGACAGTGGACGTTCTCCTGGAC AAGAGTGTTCTTCGCCAGGATGACTATCGCATAAAGGCTGCTCACCGCAT GGTGAAACGAGGGCCGGCGTTTCGTGCACGATCCTGGGCGTGGCGAGTGG ATGCTGGTTTCACACCCGCAGCGCCCACCACAGCGCAAAGCGGCCCATTG GGTGTCCGGGTCTTCCGGCCAAGAACCAGGAAGTTTCTTGTGAGGCTCAT CGAAAGGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1884:6351..7610+

>mRNA_L-elsbetiae_contig1884.5529.1 ID=mRNA_L-elsbetiae_contig1884.5529.1|Name=mRNA_L-elsbetiae_contig1884.5529.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2520bp|location=Sequence derived from alignment at L-elsbetiae_contig1884:6351..7610+ (Laminarionema elsbetiae ELsaHSoW15)
CTGGTAGCAGGTGCCAGCCCGAACGGATCCCGCCGCCTGGTTCAGAGGCC
TCTCGTGCTGGCCGCCGCCGGAGATCGCCAGGCTTCACGCGATTTGGTCC
GGTTCCTCATCGAGAAAGGGGCGGATCCGGACGCGGGCATTCGGAGCTGT
GATGACGGGAGAGACAGCAGTACTTTGATGGCAGAGGGGACCAGGCCGCT
CCACTGCGCAGTAAGACAGGTTAGTCTCGACACCGTGAGAATCCTCCTCC
GGGCAGGTGCCGACCCGGATGCCGCTGACATAGCAGGCGACACTCCGCTC
ATGGTGGCCGCCCGCGTGTCGGCAGGGGGCGGGCCGGGGCTAGATGCAGC
CTCGTCGGCTGCCATGATGGTGTGGGAGCTTCTTGCGGCGGGGGCTGATC
CCCGCTTGGCGGACTCCCTGGGAAGAGTGGCTCTGCACTTCGCGGTAGAG
CAGGGGCACACCGACGCGATCAGAGAATTGTTGCTGTCGGATGCGCCGGC
CGCGACACTGAACTGGGTTACCGAGCCACGGCCACTGTTTGCAGGCGCGC
CCCGCCCGCCGGGCTTAACACCGCTGTGTGTAGCAGCTGCTCACGGCAAG
GCAGACGCGGTGCACCTACTATTGTCGGCAGGCGCGGTGGAGCCGAAGTC
TCCTATTGAGAAATTGGGCAAAAAGCATCCTATCTTGGCCGCTGTGGAGG
GGTGTCACGAGGAGTCGTTGCGCATCCTGTTGTTGTCAGATGAAGGCCTG
GCGGCGATCTGCTGTGGCCATTCACTCGCCGATGTATTTCACTTTTTGCT
TGCATCTGCAGTTTCCGGCAAGGGGGGCGGATTTCAGAGGGCGAGAATGA
TCCACGTGATACTGTCGGTTGAGGGAGAAGAGAGGCGGTCGTACTGGGCA
ACGCTCTCGGGTACGCACCTGCCTAATATGCCTATGCTGCACTGGGCCTT
TCTGGGCGCTAATATCCCGGCCATGAGTGTACTGCTGGCAGCCGGAGCAC
ACGAGGAAGTGGTCGACGATGAGGGGAAGACAGTGGACGTTCTCCTGGAC
AAGAGTGTTCTTCGCCAGGATGACTATCGCATAAAGGCTGCTCACCGCAT
GGTGAAACGAGGGCCGGCGTTTCGTGCACGATCCTGGGCGTGGCGAGTGG
ATGCTGGTTTCACACCCGCAGCGCCCACCACAGCGCAAAGCGGCCCATTG
GGTGTCCGGGTCTTCCGGCCAAGAACCAGGAAGTTTCTTGTGAGGCTCAT
CGAAAGGTGACTGGTAGCAGGTGCCAGCCCGAACGGATCCCGCCGCCTGG
TTCAGAGGCCTCTCGTGCTGGCCGCCGCCGGAGATCGCCAGGCTTCACGC
GATTTGGTCCGGTTCCTCATCGAGAAAGGGGCGGATCCGGACGCGGGCAT
TCGGAGCTGTGATGACGGGAGAGACAGCAGTACTTTGATGGCAGAGGGGA
CCAGGCCGCTCCACTGCGCAGTAAGACAGGTTAGTCTCGACACCGTGAGA
ATCCTCCTCCGGGCAGGTGCCGACCCGGATGCCGCTGACATAGCAGGCGA
CACTCCGCTCATGGTGGCCGCCCGCGTGTCGGCAGGGGGCGGGCCGGGGC
TAGATGCAGCCTCGTCGGCTGCCATGATGGTGTGGGAGCTTCTTGCGGCG
GGGGCTGATCCCCGCTTGGCGGACTCCCTGGGAAGAGTGGCTCTGCACTT
CGCGGTAGAGCAGGGGCACACCGACGCGATCAGAGAATTGTTGCTGTCGG
ATGCGCCGGCCGCGACACTGAACTGGGTTACCGAGCCACGGCCACTGTTT
GCAGGCGCGCCCCGCCCGCCGGGCTTAACACCGCTGTGTGTAGCAGCTGC
TCACGGCAAGGCAGACGCGGTGCACCTACTATTGTCGGCAGGCGCGGTGG
AGCCGAAGTCTCCTATTGAGAAATTGGGCAAAAAGCATCCTATCTTGGCC
GCTGTGGAGGGGTGTCACGAGGAGTCGTTGCGCATCCTGTTGTTGTCAGA
TGAAGGCCTGGCGGCGATCTGCTGTGGCCATTCACTCGCCGATGTATTTC
ACTTTTTGCTTGCATCTGCAGTTTCCGGCAAGGGGGGCGGATTTCAGAGG
GCGAGAATGATCCACGTGATACTGTCGGTTGAGGGAGAAGAGAGGCGGTC
GTACTGGGCAACGCTCTCGGGTACGCACCTGCCTAATATGCCTATGCTGC
ACTGGGCCTTTCTGGGCGCTAATATCCCGGCCATGAGTGTACTGCTGGCA
GCCGGAGCACACGAGGAAGTGGTCGACGATGAGGGGAAGACAGTGGACGT
TCTCCTGGACAAGAGTGTTCTTCGCCAGGATGACTATCGCATAAAGGCTG
CTCACCGCATGGTGAAACGAGGGCCGGCGTTTCGTGCACGATCCTGGGCG
TGGCGAGTGGATGCTGGTTTCACACCCGCAGCGCCCACCACAGCGCAAAG
CGGCCCATTGGGTGTCCGGGTCTTCCGGCCAAGAACCAGGAAGTTTCTTG
TGAGGCTCATCGAAAGGTGA
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