mRNA_L-elsbetiae_contig18832.5526.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18832.5526.1 vs. uniprot
Match: A0A6H5JA57_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA57_9PHAE) HSP 1 Score: 307 bits (787), Expect = 3.460e-100 Identity = 155/171 (90.64%), Postives = 161/171 (94.15%), Query Frame = 1 Query: 13 EQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRQNHKMPYPIKDISQARILELIASDRITPVFAVSNVNGMGLPLLRAFVARLRRNKARNDDATMQV 525 +QVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTK+DICPPTVLKQTRQALAKYLRQN KMPYPIKD+ A E IASDRITPVFAVSNV GMGLPLLRAFVARLRRNK+RNDD +M + Sbjct: 168 KQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKDVDAAA--ESIASDRITPVFAVSNVTGMGLPLLRAFVARLRRNKSRNDDPSMPI 336
BLAST of mRNA_L-elsbetiae_contig18832.5526.1 vs. uniprot
Match: A0A836C8C3_9STRA (Elongation factor Tu GTP binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C3_9STRA) HSP 1 Score: 247 bits (630), Expect = 7.660e-78 Identity = 124/166 (74.70%), Postives = 143/166 (86.14%), Query Frame = 1 Query: 4 AANEQVVPTAR-SHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRQNHKMPYPIKDISQARIL-ELIASDRITPVFAVSNVNGMGLPLLRAFVARLRRNK 495 A +QVVPT++ SH+ RWAEVV +S+R++TLIDLCGHE+YLKTTVFGLTGLMPD+C+LVVG+NMGVQ MTKEHISIACAL+IP+AV VTK+DICP VLKQTRQ LAKYLRQNHKMPYP+KD +Q IASDRITPVFAVSNV G GL LLR FV++LRR K Sbjct: 56 AEGDQVVPTSKKSHVARWAEVVQNSERNITLIDLCGHERYLKTTVFGLTGLMPDYCILVVGSNMGVQVMTKEHISIACALRIPLAVCVTKVDICPVPVLKQTRQTLAKYLRQNHKMPYPVKDEAQVETAASSIASDRITPVFAVSNVTGHGLDLLRLFVSKLRRQK 221
BLAST of mRNA_L-elsbetiae_contig18832.5526.1 vs. uniprot
Match: A0A7S2WNE9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNE9_9STRA) HSP 1 Score: 248 bits (632), Expect = 1.060e-76 Identity = 121/161 (75.16%), Postives = 139/161 (86.34%), Query Frame = 1 Query: 13 EQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRQNHKMPYPIKDISQA-RILELIASDRITPVFAVSNVNGMGLPLLRAFVARLRRN 492 EQVVP AR H QRW E+V +SDR+++LIDLCGHE+YLKTTVFGLTG+MPDF LLVVGANMGVQRMT+EHISIACALQ+PIAVVVTK+DICP VLKQTRQ LAKYLR N KMPYP+K + Q + +ASDRITPVFA+S+V G GL LL+AF+ARLRRN Sbjct: 102 EQVVPQARHHHQRWTEIVENSDRAISLIDLCGHERYLKTTVFGLTGMMPDFALLVVGANMGVQRMTREHISIACALQLPIAVVVTKVDICPQPVLKQTRQDLAKYLRSNRKMPYPVKQLDQVDAAADAVASDRITPVFAISSVTGQGLELLKAFLARLRRN 262
BLAST of mRNA_L-elsbetiae_contig18832.5526.1 vs. uniprot
Match: A0A7S2BKI3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKI3_9STRA) HSP 1 Score: 240 bits (613), Expect = 3.890e-74 Identity = 117/161 (72.67%), Postives = 137/161 (85.09%), Query Frame = 1 Query: 13 EQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRQNHKMPYPIKDISQARIL-ELIASDRITPVFAVSNVNGMGLPLLRAFVARLRRN 492 EQVVP AR H QRWAEVV+ SDR++TLIDLCGHEKYLKTTVFGLTG+MPD LLVVGANMGVQ MTKEH++IACALQ+PIAVVVTK+DICP +LKQTRQ++AK LRQN KMPYP+KD SQ + + SDR+TPVFA+S+V GMGL LL+ F+ +L RN Sbjct: 145 EQVVPQARQHNQRWAEVVDQSDRAITLIDLCGHEKYLKTTVFGLTGMMPDLALLVVGANMGVQIMTKEHVAIACALQLPIAVVVTKVDICPQPILKQTRQSIAKCLRQNRKMPYPVKDSSQVEAAAQAVISDRVTPVFAISSVTGMGLKLLKDFLGKLSRN 305
BLAST of mRNA_L-elsbetiae_contig18832.5526.1 vs. uniprot
Match: A0A7R9UAM3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAM3_9STRA) HSP 1 Score: 235 bits (599), Expect = 1.390e-71 Identity = 116/161 (72.05%), Postives = 136/161 (84.47%), Query Frame = 1 Query: 13 EQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRQNHKMPYPIKDISQARIL-ELIASDRITPVFAVSNVNGMGLPLLRAFVARLRRN 492 EQVV TAR H QRWA+VV +DRSVTLIDLCGHEKYLKTTVFGLTG+ PDFC++VVGANMGVQRMT+EHISIACAL IP+ V VTKIDI P VLKQTR+ LAK+LR KMPYP+K+ SQ + +ASDRITPVFA+S+V G+GLPLLR FV+++RR+ Sbjct: 212 EQVVATARQHSQRWAQVVKEADRSVTLIDLCGHEKYLKTTVFGLTGMCPDFCIVVVGANMGVQRMTREHISIACALSIPLVVCVTKIDIAPQPVLKQTRRTLAKFLRACGKMPYPVKESSQVEAAAQSVASDRITPVFAISSVTGLGLPLLREFVSKIRRS 372
BLAST of mRNA_L-elsbetiae_contig18832.5526.1 vs. uniprot
Match: A0A6V2X5T2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2X5T2_HETAK) HSP 1 Score: 227 bits (579), Expect = 1.460e-69 Identity = 112/165 (67.88%), Postives = 137/165 (83.03%), Query Frame = 1 Query: 10 NEQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRQNHKMPYPIKDISQARIL-ELIASDRITPVFAVSNVNGMGLPLLRAFVARLRRNKAR 501 NEQVVPT R L+RWAEVV +S+RS+TLIDLCGHE+YLKTTVFGLTG++PDF ++VVG NMGVQ MT+EHISIA AL IP+AV VTK+DI P VLKQTRQ LAK+LR++ K+PYP++D QA + I SDR+TPVFA+SNV G GL LLR F+++LRRNK + Sbjct: 118 NEQVVPTERQALKRWAEVVRNSERSLTLIDLCGHERYLKTTVFGLTGMLPDFTVVVVGGNMGVQLMTREHISIAAALAIPMAVAVTKVDIAPVPVLKQTRQTLAKFLRKHGKLPYPVRDADQAAAAADSICSDRVTPVFAISNVTGQGLDLLRLFLSKLRRNKCK 282
BLAST of mRNA_L-elsbetiae_contig18832.5526.1 vs. uniprot
Match: A0A7S3K4J1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4J1_9STRA) HSP 1 Score: 226 bits (576), Expect = 2.090e-68 Identity = 111/159 (69.81%), Postives = 135/159 (84.91%), Query Frame = 1 Query: 16 QVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRQNHKMPYPIKDISQARIL-ELIASDRITPVFAVSNVNGMGLPLLRAFVARLRR 489 Q+VPTAR H QRWAEVV SD+SVTLIDLCGHE+YLKTTVFGLT + PD+ LLVVGANMGVQRMTKEH++IACAL IPIAVV+TKID+CP VLKQTRQ LA+ LRQ+ +MP P+KD +Q + E I + RI PVF+VSNV+G+G+PLLR F++++RR Sbjct: 152 QIVPTARHHSQRWAEVVAGSDKSVTLIDLCGHERYLKTTVFGLTAMYPDYALLVVGANMGVQRMTKEHVAIACALSIPIAVVITKIDMCPQPVLKQTRQTLARCLRQHQRMPLPVKDDAQVIVAAESIQNGRIAPVFSVSNVSGLGVPLLRNFLSKIRR 310
BLAST of mRNA_L-elsbetiae_contig18832.5526.1 vs. uniprot
Match: A0A812UTX0_SYMMI (GTPBP1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UTX0_SYMMI) HSP 1 Score: 221 bits (562), Expect = 1.260e-67 Identity = 106/165 (64.24%), Postives = 134/165 (81.21%), Query Frame = 1 Query: 10 NEQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRQNHKMPYPIKDISQARILEL-IASDRITPVFAVSNVNGMGLPLLRAFVARLRRNKAR 501 N QVVPTAR+H+QRW E+ S+R++TLIDLCGHEKYLKTT+FGLTGLMPDF L+VG+NMGVQ MT+EHISI+CAL +P+ V V+K+DICPP VL+ TR+ LAK LR KMP+P+KD+ A I IAS+RITPVF +SNV G G+ LL+AF++RL+R+ R Sbjct: 57 NTQVVPTARNHIQRWVEINERSERTLTLIDLCGHEKYLKTTLFGLTGLMPDFAFLIVGSNMGVQMMTREHISISCALNLPMFVAVSKVDICPPNVLQNTRRTLAKILRSYGKMPHPVKDMDSAVIAAAAIASNRITPVFTISNVTGQGVDLLKAFLSRLKRSPMR 221
BLAST of mRNA_L-elsbetiae_contig18832.5526.1 vs. uniprot
Match: W7TYD2_9STRA (Gtp-binding protein 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYD2_9STRA) HSP 1 Score: 223 bits (568), Expect = 6.110e-67 Identity = 108/160 (67.50%), Postives = 134/160 (83.75%), Query Frame = 1 Query: 13 EQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRQNHKMPYPIKDISQARIL-ELIASDRITPVFAVSNVNGMGLPLLRAFVARLRR 489 EQV+P R+ RW E+V S R+VTLIDLCGHE+YLKTT+FGLTGL+PDF LL+VG+NMGV MT+EHI+IACAL IP+AVV+TKIDI P VLKQTRQ LA+YLR+N+K+PYPIKD++Q + +ASDR+TPVFA+S+V G G+ LLRAFV+RLRR Sbjct: 150 EQVLPQGRNQTHRWQEIVRSSGRTVTLIDLCGHERYLKTTIFGLTGLLPDFALLLVGSNMGVTVMTREHIAIACALSIPLAVVLTKIDIAPEPVLKQTRQTLARYLRKNNKLPYPIKDMTQVEAAADSLASDRVTPVFAISSVTGQGMDLLRAFVSRLRR 309
BLAST of mRNA_L-elsbetiae_contig18832.5526.1 vs. uniprot
Match: A0A7S3HE85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HE85_9STRA) HSP 1 Score: 217 bits (552), Expect = 3.400e-66 Identity = 106/163 (65.03%), Postives = 132/163 (80.98%), Query Frame = 1 Query: 16 QVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKIDICPPTVLKQTRQALAKYLRQNHKMPYPIKDISQARIL-ELIASDRITPVFAVSNVNGMGLPLLRAFVARLRRNKAR 501 QV T+R+H RWAEV+ SD SVTLIDLCGHEKYLKTT+FGLTGLMPD+C+LVVG+NMGVQ MT+EHISIACAL +P+ V VTK+DICP +LK TR ALAK LR + KMP+P+KD++ + + + SDRITPVF +S+V G G+ LL+AFVA +RR+ AR Sbjct: 127 QVYGTSRNHAHRWAEVMEKSDHSVTLIDLCGHEKYLKTTLFGLTGLMPDYCMLVVGSNMGVQVMTREHISIACALNLPMFVAVTKVDICPENILKTTRTALAKLLRAHGKMPFPVKDLAGVQTAADSLCSDRITPVFTLSSVTGQGVDLLKAFVATVRRSPAR 289 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18832.5526.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18832.5526.1 >prot_L-elsbetiae_contig18832.5526.1 ID=prot_L-elsbetiae_contig18832.5526.1|Name=mRNA_L-elsbetiae_contig18832.5526.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=175bp MAANEQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGback to top mRNA from alignment at L-elsbetiae_contig18832:270..2509- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18832.5526.1 ID=mRNA_L-elsbetiae_contig18832.5526.1|Name=mRNA_L-elsbetiae_contig18832.5526.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2240bp|location=Sequence derived from alignment at L-elsbetiae_contig18832:270..2509- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18832:270..2509- >mRNA_L-elsbetiae_contig18832.5526.1 ID=mRNA_L-elsbetiae_contig18832.5526.1|Name=mRNA_L-elsbetiae_contig18832.5526.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1050bp|location=Sequence derived from alignment at L-elsbetiae_contig18832:270..2509- (Laminarionema elsbetiae ELsaHSoW15)back to top |