mRNA_L-elsbetiae_contig1877.5496.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1877.5496.1
Unique NamemRNA_L-elsbetiae_contig1877.5496.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1877.5496.1 vs. uniprot
Match: D8LL63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL63_ECTSI)

HSP 1 Score: 681 bits (1756), Expect = 2.910e-244
Identity = 342/394 (86.80%), Postives = 367/394 (93.15%), Query Frame = 1
Query:    4 ARNKSKALAMLTGGKVPKEGSGLEVVVGDIRDKSSLTPSLFKDVVAVVSCTAAIVRPKEGDGPDRAKYFQGITFYEPEVADVPKETEFEGVSNLVEAVSRYSDVKGKTLYACLPSFQEGWRQWGALDDVVMGGVSESGLRVVPGAGEP-LSNSDGAPAAAAAVFAGEVKTSNSGGFVSVRTRNASPPLDLSAYDGLRLRVKGDGNRYKFSIYDSPGWNSKAWCDSFDTVEGEWMDVDIPFNTLTYNFRTESVKDPPAFSPSTISSFQLMLSKFELDGKLNPNFSAGPFELAISSIKAVST-VAEENQNSRFVHLSSAGVTRPGRPDLDIDAEPPAVRMNDMLSYLLTYKLKGEDVVRESGIPSTIIRPCALTEEPNGAPMIVAQGDNIKGKISR 1179
            ARNKSKALAMLTGGK  K GSGL+VVV DI DKSSLTPSLFKDV AVVSCTAAIVRPKEGDGPDRAKYFQGITFYEPEVADVPKETEFEG+ NLVEA SRYSD+KGKTL+ACLPSFQEGWRQWGALDDVVMGGVSESGL VVPGAGE  +S+S G+PAAAA VF+GEVKTSNSGGFVS+RTRNASPPLDLS YD LRLRVKGDGNRYKFSIYDSPGWNSKAWCD+FDTV+GEW+DVDIPF TL YNFRTES+KDPP FSP++I+SFQLMLSKFELDGKLNPNFSAGPFEL I+SIKAVS   +EE QNSRFVHLSSAGVTRPGRPDLD+D EPPAVRMN+MLS+LLTYKLKGEDV+R+SGIP+TIIRPCALTEEP GAPMIV QGD +KGKISR
Sbjct:    2 ARNKSKALAMLTGGKETKGGSGLDVVVADIADKSSLTPSLFKDVAAVVSCTAAIVRPKEGDGPDRAKYFQGITFYEPEVADVPKETEFEGIYNLVEAASRYSDMKGKTLFACLPSFQEGWRQWGALDDVVMGGVSESGLGVVPGAGETDVSSSSGSPAAAA-VFSGEVKTSNSGGFVSIRTRNASPPLDLSEYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWIDVDIPFTTLKYNFRTESIKDPPPFSPNSINSFQLMLSKFELDGKLNPNFSAGPFELTIASIKAVSIETSEEMQNSRFVHLSSAGVTRPGRPDLDMDTEPPAVRMNEMLSHLLTYKLKGEDVIRDSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISR 394          
BLAST of mRNA_L-elsbetiae_contig1877.5496.1 vs. uniprot
Match: A0A6H5KMW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMW5_9PHAE)

HSP 1 Score: 678 bits (1749), Expect = 3.150e-240
Identity = 341/393 (86.77%), Postives = 358/393 (91.09%), Query Frame = 1
Query:    4 ARNKSKALAMLTGGKVPKEGSGLEVVVGDIRDKSSLTPSLFKDVVAVVSCTAAIVRPKEGDGPDRAKYFQGITFYEPEVADVPKETEFEGVSNLVEAVSRYSDVKGKTLYACLPSFQEGWRQWGALDDVVMGGVSESGLRVVPGAGEPLSNSDGAPAAAAAVFAGEVKTSNSGGFVSVRTRNASPPLDLSAYDGLRLRVKGDGNRYKFSIYDSPGWNSKAWCDSFDTVEGEWMDVDIPFNTLTYNFRTESVKDPPAFSPSTISSFQLMLSKFELDGKLNPNFSAGPFELAISSIKAVST-VAEENQNSRFVHLSSAGVTRPGRPDLDIDAEPPAVRMNDMLSYLLTYKLKGEDVVRESGIPSTIIRPCALTEEPNGAPMIVAQGDNIKGKISR 1179
            ARNKSKALAMLT GK  K GSGL+VVV +I DKSSLTPSLFKDV AVVSCTAAIVRPKEGDGPDRAKYF GITFYEPEVADVPKETEFEG+ NLVEA SRYSD+KGKTL+ACLPSFQE WRQWGALDDVVMGGVSESGLRVVPGAGE  + S     AAAAVF+GEVKTSNSGGFVS+RTRNASPPLDLSAYD LRLRVKGDGNRYKFSIYDSPGWNSKAWCD+FDTV+GEWMDVDIPF+TL YNFRTESVKDPP FSP +I SFQLMLSKFELDGKLNPNFSAGPFEL  SSIKAVS   AEE QNSR VHLSSAGVTRPGRPDLDID EPPAVRMN+MLSYLLTYKLKGEDV+R+SGIP+TIIRPCALTEEP GAPMIV QGD +KGKISR
Sbjct:  185 ARNKSKALAMLTEGKETKGGSGLDVVVANIIDKSSLTPSLFKDVAAVVSCTAAIVRPKEGDGPDRAKYFNGITFYEPEVADVPKETEFEGICNLVEAASRYSDIKGKTLFACLPSFQEEWRQWGALDDVVMGGVSESGLRVVPGAGETDAKSSSGSPAAAAVFSGEVKTSNSGGFVSIRTRNASPPLDLSAYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWMDVDIPFSTLKYNFRTESVKDPPPFSPDSIHSFQLMLSKFELDGKLNPNFSAGPFELTTSSIKAVSIETAEERQNSRLVHLSSAGVTRPGRPDLDIDTEPPAVRMNEMLSYLLTYKLKGEDVIRDSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISR 577          
BLAST of mRNA_L-elsbetiae_contig1877.5496.1 vs. uniprot
Match: A0A7S2UWN3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWN3_9STRA)

HSP 1 Score: 450 bits (1157), Expect = 7.140e-153
Identity = 225/391 (57.54%), Postives = 277/391 (70.84%), Query Frame = 1
Query:    7 RNKSKALAMLTGGKVPKEGSGLEVVVGDIRDKSSLTPSLFKDVVAVVSCTAAIVRPKEGDGPDRAKYFQGITFYEPEVADVPKETEFEGVSNLVEAVSRYSDVKGKTLYACLPSFQEGWRQWGALDDVVMGGVSESGLRVVPGAGEPLSNSDGAPAAAAAVFAGEVKTSNSGGFVSVRTRNASPPLDLSAYDGLRLRVKGDGNRYKFSIYDSPGWNSKAWCDSFDTVEGEWMDVDIPFNTLTYNFRTESVKDPPAFSPSTISSFQLMLSKFELDGKLNPNFSAGPFELAISSIKAVSTVAEENQNSRFVHLSSAGVTRPGRPDLDIDAEPPAVRMNDMLSYLLTYKLKGEDVVRESGIPSTIIRPCALTEEPNGAPMIVAQGDNIKGKISR 1179
            RNKSKALA L  GK P   S LE+VVGD+    SL  S+F+ V A V C AAIV+P+EGDGPDRAKYFQGI FYEPE+ D P + +F+G  N+VE + ++  V+GK LY   P  Q  WRQ+G+LDDVVMGG+S+S L VVPGAGE  + S       AAVF+GEV T N+GGF SVRTRN  PPLDLS++DG+ +R+KGDGNRYK  + D   W+  +WC SFDT  G+WMDV IPF       R+ S+   P    + I +FQ+ LSKFE DG LNPNF+AG F L + SIKA   V+      R ++LSSAGVTRPGRP + +D EPPAVRMND L  +LT KLKGED +R+SG+P  ++RPCALTEEP GAP++V QGDN+KGKISR
Sbjct:   61 RNKSKALAYLCNGKEPSPDSLLEIVVGDLTKVESLKASIFRGVQAAVLCHAAIVKPQEGDGPDRAKYFQGIQFYEPEMVDKPMDIDFKGTCNIVEGLKKFGSVEGKVLYGSSPGLQNSWRQFGSLDDVVMGGISKSSLSVVPGAGEEATGSR-----IAAVFSGEVSTDNNGGFASVRTRNLDPPLDLSSFDGIEMRLKGDGNRYKLMLRDETRWDGISWCYSFDTEAGKWMDVRIPFKDFIPTLRSNSISGGPQLRTTEIYAFQITLSKFEYDGSLNPNFTAGSFSLVLDSIKAYERVSVP----RVIYLSSAGVTRPGRPGIQLDQEPPAVRMNDALGGILTAKLKGEDCLRDSGLPYCVMRPCALTEEPRGAPLVVEQGDNMKGKISR 442          
BLAST of mRNA_L-elsbetiae_contig1877.5496.1 vs. uniprot
Match: A0A0G4FWF9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FWF9_VITBC)

HSP 1 Score: 450 bits (1158), Expect = 7.480e-153
Identity = 227/393 (57.76%), Postives = 282/393 (71.76%), Query Frame = 1
Query:    7 RNKSKALAMLTGGKVPK-EGSGLEVVVGDIRDKSSLTPSLFKDVVAVVSCTAAIVRPKEGDGPDRAKYFQGITFYEPEVADVPKETEFEGVSNLVEAVSRYSDVKGKTLYACLPSFQEGWRQWGALDDVVMGGVSESGLRVVPGAGEPLSNSDGAPAAAAAVFAGEVKTSNSGGFVSVRTRNASPPLDLSAYDGLRLRVKGDGNRYKFSIYDSPGWNSKAWCDSFDTVEGEWMDVDIPFNTLTYNFRTESVKDPPA-FSPSTISSFQLMLSKFELDGKLNPNFSAGPFELAISSIKAVSTVAEENQNSRFVHLSSAGVTRPGRPDLDIDAEPPAVRMNDMLSYLLTYKLKGEDVVRESGIPSTIIRPCALTEEPNGAPMIVAQGDNIKGKISR 1179
            RNKSK LA L+GGK P  +  GLE+   DI     + P LF+DVVAV+ C+AAIV P+EGD PDR KY+QGI F+EP V D P+E +F GV N+VEA  R++ +    L++  P F + W  WG LDDVVMGGVSES +++ PGA EP +      A  AAVF+GEVKT+N GGFVSVRTR   PPLDLSAY+GLRLR+KGDG+RYK  I D+ GW+S +W   FDTV+ EW+ VD+PF+    NFR    KDP A    + I S QLMLSKFE DG+LNP+F+ G F L + S++A     E  ++ R + +SSAGVTRPGRP LD++ EPPAVRMNDML  +LTYKLKGEDVVR+SG+  ++IRPCALTEEP GAP+ + QGD IKGKISR
Sbjct:   58 RNKSKGLAFLSGGKEPSLKNDGLEIAAADITKPEEIRPHLFRDVVAVIICSAAIVTPREGDTPDREKYYQGIKFFEPMVVDSPEEVDFRGVQNVVEAAQRFASLDTLKLFSAQPGFHDTWEAWGPLDDVVMGGVSESNIKLEPGAAEPNTG-----ATVAAVFSGEVKTANFGGFVSVRTRKFDPPLDLSAYEGLRLRIKGDGSRYKMQIRDNAGWDSPSWGMGFDTVKDEWVTVDLPFSDFVQNFRNMKTKDPSAKLKTNEIYSLQLMLSKFEFDGELNPSFTPGKFRLVVQSMEAYPD--ESAKSPRLIQVSSAGVTRPGRPGLDLEKEPPAVRMNDMLGGILTYKLKGEDVVRDSGVTYSVIRPCALTEEPAGAPLQIGQGDEIKGKISR 443          
BLAST of mRNA_L-elsbetiae_contig1877.5496.1 vs. uniprot
Match: W7TT61_9STRA (Nadh:ubiquinone oxidoreductase complex i intermediate-associated protein 30 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TT61_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 1.070e-138
Identity = 219/398 (55.03%), Postives = 276/398 (69.35%), Query Frame = 1
Query:    4 ARNKSKALAMLTGGKVPKEGSGLEVVVGDIRDKSSLTPSLFKDVVAVVSCTAAIVRPKEGDGPDRAKYFQGITFYEPEVADVPKETEFEGVSNLVEAVSRYSDVKG-KTLYACLPSFQEGWRQWGALDDVVMGGVSESGLRVVPGAGEPLSNSDGAPAAAAAVFAGEVKTSN---SGGFVSVRTRNASPPLDLSAYDGLRLRVKGDGNRYKFSIYDSPGWNSKAWCDSFDTVEGEWMDVDIPFNTLTYNFRTESVK--DPPAFSPSTISSFQLMLSKFELDGKLNPNFSAGPFELAISSIKAVSTVAEENQNSRFVHLSSAGVTRPGRPDLDIDAEPPAVRMNDMLSYLLTYKLKGEDVVRESGIPSTIIRPCALTEEPNGAPMIVAQGDNIKGKISR 1179
            ARN+ KALAML GG+ P+ G+ LE+V  DIRD ++LTP L + V AV+ CTAAIV+PK GD  DRAKY+QGI FYEPE  D P+ET+F GV N++ A S+Y+DVKG K LY C P+F + W+ + +LDDVVMGG S+S   +VPGAGE  + ++ +P+  A VF G V T     SGGF SVRTRN  PPLDL+ Y+GLRLRV GDGN YK  + DS  W+  +W     T  GEW D+D+PF +L    RT S+      AF    I + Q+MLSKF  DG++NP +  GPF+L I SI+A    +   +  RFVH+SSAGV RPGRP + ++ EPPAVRMNDML  +LTYKLKGE+ +R SG+P TIIRPCALTEEP   P+ V  GD IKGK+SR
Sbjct:  145 ARNEQKALAMLNGGQKPEPGALLEIVNADIRDPAALTPELMEGVTAVIGCTAAIVQPKSGDSEDRAKYYQGIVFYEPETLDSPEETDFVGVKNVLAAASKYADVKGCKKLYNCAPAFIDRWQDFASLDDVVMGGTSDSKFTLVPGAGE--AGNEDSPSRIAGVFEGMVTTERGFASGGFTSVRTRNLEPPLDLTGYEGLRLRVLGDGNTYKIILRDSDQWDGPSWSTMVPTQAGEWADLDVPFTSLIPVARTRSIPADQRQAFRLDQIFAIQIMLSKFAYDGEVNPTYKDGPFKLVIQSIEAYMGPSAP-RTPRFVHISSAGVERPGRPGVVLEEEPPAVRMNDMLGGILTYKLKGEEAIRASGLPYTIIRPCALTEEPANMPLEVDVGDTIKGKVSR 539          
BLAST of mRNA_L-elsbetiae_contig1877.5496.1 vs. uniprot
Match: K8YQM7_NANGC (Nadh:ubiquinone oxidoreductase complex i intermediate-associated protein 30 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YQM7_NANGC)

HSP 1 Score: 417 bits (1072), Expect = 6.370e-134
Identity = 219/398 (55.03%), Postives = 276/398 (69.35%), Query Frame = 1
Query:    4 ARNKSKALAMLTGGKVPKEGSGLEVVVGDIRDKSSLTPSLFKDVVAVVSCTAAIVRPKEGDGPDRAKYFQGITFYEPEVADVPKETEFEGVSNLVEAVSRYSDVKG-KTLYACLPSFQEGWRQWGALDDVVMGGVSESGLRVVPGAGEPLSNSDGAPAAAAAVFAGEVKTSN---SGGFVSVRTRNASPPLDLSAYDGLRLRVKGDGNRYKFSIYDSPGWNSKAWCDSFDTVEGEWMDVDIPFNTLTYNFRTESVK--DPPAFSPSTISSFQLMLSKFELDGKLNPNFSAGPFELAISSIKAVSTVAEENQNSRFVHLSSAGVTRPGRPDLDIDAEPPAVRMNDMLSYLLTYKLKGEDVVRESGIPSTIIRPCALTEEPNGAPMIVAQGDNIKGKISR 1179
            ARN+ KALAML GG+ P+ G+ LE+V  DIRD ++LTP L + V AV+ CTAAIV+PK GD  DRAKY+QGI FYEPE  D P+ET+F GV N++ A S+Y+DVKG K LY C P+F + W+ + +LDDVVMGG S+S   +VPGAGE  + ++ +P+  A VF G V T     SGGF SVRTRN  PPLDL+ Y+GLRLRV GDGN YK  + DS  W+  +W     T  GEW D+D+PF +L    RT S+      AF    I + Q+MLSKF  DG++NP +  GPF+L I SI+A    +   +  RFVH+SSAGV RPGRP + ++ EPPAVRMNDML  +LTYKLKGE+ +R SG+P TIIRPCALTEEP   P+ V  GD IKGK+SR
Sbjct:  145 ARNEQKALAMLNGGQKPEPGALLEIVNADIRDPAALTPELMEGVTAVIGCTAAIVQPKSGDSEDRAKYYQGIVFYEPETLDSPEETDFVGVKNVLAAASKYADVKGCKKLYNCAPAFIDRWQDFASLDDVVMGGTSDSKFTLVPGAGE--AGNEDSPSRIAGVFEGMVTTERGFASGGFTSVRTRNLEPPLDLTGYEGLRLRVLGDGNTYKIILRDSDQWDGPSWSTMVPTQAGEWADLDVPFTSLIPVARTRSIPADQRQAFRLDQIFAIQIMLSKFAYDGEVNPTYKDGPFKLVIQSIEAYMGPSAP-RTPRFVHISSAGVERPGRPGVVLEEEPPAVRMNDMLGGILTYKLKGEEAIRASGLPYTIIRPCALTEEPANMPLEVDVGDTIKGKVSR 539          
BLAST of mRNA_L-elsbetiae_contig1877.5496.1 vs. uniprot
Match: A0A6H1TX18_9CYAN (NAD(P)H-binding protein n=2 Tax=Oxynema TaxID=1492710 RepID=A0A6H1TX18_9CYAN)

HSP 1 Score: 380 bits (975), Expect = 2.000e-125
Identity = 197/377 (52.25%), Postives = 250/377 (66.31%), Query Frame = 1
Query:   61 GSGLEVVVGDIRDKSSLTPSLFKDVVAVVSCTAAIVRPKEGDGPDRAKYFQGITFYEPEVADVPKETEFEGVSNLVEAVSR----YSDVKGKTLYACLPSFQEGWRQWGALDDVVMGGVSESGLRVVPGAGEPLSNSDGAPAAAAAVFAGEVKTSNSGGFVSVRTRNASPPLDLSAYDGLRLRVKGDGNRYKFSIYDSPGWNSKAWCDSFDTVEGEWMDVDIPFNTLTYNFRTESVKDPPAFSPSTISSFQLMLSKFELDGKLNPNFSAGPFELAISSIKAVSTVAEENQNSRFVHLSSAGVTRPGRPDLDIDAEPPAVRMNDMLSYLLTYKLKGEDVVRESGIPSTIIRPCALTEEPNGAPMIVAQGDNIKGKISR 1179
            G  +E+V GD+    +L+  L  DV  V+ C+   V+PKEGD P+R KY+QGI FY PEV DVP+  E++G+ +LV+A  R    + +   K L+      Q+    WG LDD+VMGGVSES +R+V                  A+F G V TSNSGGFVS+RTRN  PPLDLSAY G+ LRVKGDG RYKF + +   W+S+++C SFDTV   W  V IPF+ L   FR ++V + P F P TI S QLMLSKFE DG+LNP F  G F+L + SI A        +  +FVH+SSAGVTRPGRPDL+++ EPPAVRMND L  +LT+KL+GEDV+R SGIP TI+RPCALTEEP G  +I  +GDNIKGK+SR
Sbjct:   93 GDRVEMVEGDLLLPETLSDRLMHDVSTVICCSGTKVQPKEGDTPNREKYYQGIKFYMPEVIDVPELVEYKGIRHLVDATRRQLNQWGNSSNKMLFDFRKVTQDLKETWGVLDDIVMGGVSESNVRIVENT---------------ALFTGNVSTSNSGGFVSIRTRNFDPPLDLSAYQGIDLRVKGDGKRYKFILRNESQWDSRSYCYSFDTVSNIWFTVRIPFSDLIPVFRAKTVNNAPPFDPKTIYSIQLMLSKFEYDGELNPKFEPGFFQLQVESISAYGA----QEKPQFVHVSSAGVTRPGRPDLNLEEEPPAVRMNDQLGGILTWKLRGEDVIRASGIPYTIVRPCALTEEPGGKDLIFDRGDNIKGKVSR 450          
BLAST of mRNA_L-elsbetiae_contig1877.5496.1 vs. uniprot
Match: A0A067JBE8_JATCU (Uncharacterized protein n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067JBE8_JATCU)

HSP 1 Score: 379 bits (973), Expect = 2.200e-125
Identity = 203/394 (51.52%), Postives = 264/394 (67.01%), Query Frame = 1
Query:    7 RNKSKALAMLTGGKVPKEGSGLEVVVGDIRDKSSLTPSLFKDVVAVVSCTAAIVRPKEGDGPDRAKYFQGITFYEPEV-ADVPKETEFEGVSNLVEAVSRYSDVK-GKTLYACLP-SFQEGWRQWGALDDVVMGGVSESGLRVVPGAGEPLSNSDGAPAAAAAVFAGEVKTSNSGGFVSVRTRNASPPLDLSAYDGLRLRVKGDGNRYKFSIYDSPGWNSKAWCDSFDTVEGEWMDVDIPFNTLTYNFRTESVKDPPAFSPSTISSFQLMLSKFELDGKLNPNFSAGPFELAISSIKAVSTVAEENQNSRFVHLSSAGVTRPGRPDLDIDAEPPAVRMNDMLSYLLTYKLKGEDVVRESGIPSTIIRPCALTEEPNGAPMIVAQGDNIKGKISR 1179
            RN  KA  +L        GS ++++VGDI  +S+L P  FK V  V++  + IV PKEGD P+RAKY QGI F+EPE+  D P+  E+ G+ NL+ AV     ++ GK ++ C   SF++    WGALDDVVMGGVSES  ++    GE     +G P     +F G + T+N+GGF S+RTRN S P DLSAYDGL LR+KGDG RYK  +  S  W++  +  SFDTVEG+W  + +PF++L   FR  ++ D P F PS I S QLM SKFE DGKLNP F+ GPF+L +SSIKA     ++    RFVH+SSAGVTRP RP LD+  +PPAVR+N  L ++LT+KLKGED++RESG+P  I+RPCALTEEP GA +I  QGDNI GK+SR
Sbjct:   36 RNAEKARKLL--------GSNIDLIVGDITKESTLVPEYFKGVRKVINAASVIVGPKEGDTPERAKYSQGIKFFEPEIKGDSPEMVEYIGMKNLINAVKENVGLRNGKLIFGCEDNSFKD--LPWGALDDVVMGGVSESAFQIDTTGGE-----NGGPTG---IFKGVLSTANNGGFTSIRTRNFSVPEDLSAYDGLELRLKGDGRRYKLIVRTSRDWDTVGYTASFDTVEGQWQSIRLPFSSLRPIFRARTMPDAPPFDPSNIISLQLMFSKFEYDGKLNPTFAEGPFQLPVSSIKAF---IKDPITPRFVHVSSAGVTRPDRPGLDLSKQPPAVRLNKELGFILTFKLKGEDLIRESGMPYAIVRPCALTEEPAGADLIFDQGDNITGKVSR 408          
BLAST of mRNA_L-elsbetiae_contig1877.5496.1 vs. uniprot
Match: A0A1U7Z5M1_NELNU (uncharacterized protein LOC104586544 n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7Z5M1_NELNU)

HSP 1 Score: 380 bits (977), Expect = 2.420e-124
Identity = 208/396 (52.53%), Postives = 263/396 (66.41%), Query Frame = 1
Query:    7 RNKSKALAMLTGGKVPKEGSGLEVVVGDIRDKSSLTPSLFKDVVAVVSCTAAIVRPKEGDGPDRAKYFQGITFYEPEV-ADVPKETEFEGVSNLVEAVSRYSDVK-GKTLYACLPSFQEGWRQ---WGALDDVVMGGVSESGLRVVPGAGEPLSNSDGAPAAAAAVFAGEVKTSNSGGFVSVRTRNASPPLDLSAYDGLRLRVKGDGNRYKFSIYDSPGWNSKAWCDSFDTVEGEWMDVDIPFNTLTYNFRTESVKDPPAFSPSTISSFQLMLSKFELDGKLNPNFSAGPFELAISSIKAVSTVAEENQNSRFVHLSSAGVTRPGRPDLDIDAEPPAVRMNDMLSYLLTYKLKGEDVVRESGIPSTIIRPCALTEEPNGAPMIVAQGDNIKGKISR 1179
            RN+ KA  ML        G  ++++VGDI  +S+L P  FK V  V++  + IV PKEGD PDRAKY QGI F+EPE+  D P+  E+ G+ NL+ AV +   ++ GK L+     F++   +   WGALDDVVMGGVSES  ++ P   E     +G P     +F G V T N+GGF S+RTRN S P DLS YDGL LR+KGDG RYK  +  SP W++  +  SFDTV+G+W  + +PF++L   FR  +V D P F PS I S QLM SKFE DGKLNP F  GPFEL +SSI+A     ++    RFVH+SSAGVTRP RP LD+  +PPAVR+N  L ++LT+KLKGED++RESGIP TIIRPCALTEEP GA +I  QGDNI GKISR
Sbjct:  160 RNEEKAKRML--------GPDVDLIVGDITKESTLVPEHFKGVKKVINAVSVIVGPKEGDTPDRAKYSQGIKFFEPEIKGDSPEMVEYLGMKNLLNAVKKSIGLRNGKLLFG----FEDNLSKELPWGALDDVVMGGVSESAFQIYPTGSE-----NGGPTG---LFKGVVSTKNNGGFTSIRTRNFSVPEDLSEYDGLELRLKGDGRRYKLIVRISPDWDTVGYTASFDTVKGQWQSIRLPFSSLRPIFRARTVLDAPPFDPSKIVSLQLMFSKFEYDGKLNPTFVEGPFELPVSSIRAY---IQDRITPRFVHVSSAGVTRPDRPGLDLSKQPPAVRLNKELGFILTFKLKGEDLIRESGIPYTIIRPCALTEEPAGADLIFDQGDNITGKISR 532          
BLAST of mRNA_L-elsbetiae_contig1877.5496.1 vs. uniprot
Match: UPI001686BF08 (CIA30 family protein n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001686BF08)

HSP 1 Score: 376 bits (966), Expect = 4.420e-124
Identity = 199/375 (53.07%), Postives = 247/375 (65.87%), Query Frame = 1
Query:   61 GSGLEVVVGDIRDKSSLTPSLFKDVVAVVSCTAAIVRPKEGDGPDRAKYFQGITFYEPEVADVPKETEFEGVSNLVEAVSRYSDVKG--KTLYACLPSFQEGWRQWGALDDVVMGGVSESGLRVVPGAGEPLSNSDGAPAAAAAVFAGEVKTSNSGGFVSVRTRNASPPLDLSAYDGLRLRVKGDGNRYKFSIYDSPGWNSKAWCDSFDTVEGEWMDVDIPFNTLTYNFRTESVKDPPAFSPSTISSFQLMLSKFELDGKLNPNFSAGPFELAISSIKAVSTVAEENQNSRFVHLSSAGVTRPGRPDLDIDAEPPAVRMNDMLSYLLTYKLKGEDVVRESGIPSTIIRPCALTEEPNGAPMIVAQGDNIKGKISR 1179
            G+ +E+V GDI    SLTP++F+DV AVV CT   V+PKEGD P R KY+QGI FY PEV DVP+  E++G+ NLV A   +    G  K ++      Q+    WGALDD+VMGGVSES +R+V                  A F+G V T+NSGGF SVRT+N  PPL+L+ Y G+ LR+KGDG RYKF I     W+   +  SFDTV   W+ V IPF  L   FR ++VKD      S I+SFQLMLSKFE DG+LNP F AG F+L + SIKA        +  +FVH+SSAGVTRPGRP L+++ EPPAVRMND L  +LT+KL+GED +R SGIP TIIRPCALTEEP G  +I  QGDNI+GK+SR
Sbjct:   92 GNAVELVEGDITIPESLTPAVFRDVTAVVCCTGTRVQPKEGDTPTREKYYQGIKFYMPEVVDVPEVVEYQGIENLVRATRTHFQGAGDEKMIFDFTKPSQDIKETWGALDDIVMGGVSESSIRLVDNT---------------AFFSGNVSTANSGGFASVRTKNFEPPLNLAGYAGIDLRIKGDGKRYKFIIRSEVKWDGVGYSYSFDTVYNIWITVRIPFAALIPVFRAKTVKDGEPIDTSNINSFQLMLSKFEYDGELNPKFEAGIFQLQVESIKAYGA----EKFPKFVHISSAGVTRPGRPGLNLEEEPPAVRMNDQLGGILTWKLRGEDSIRFSGIPYTIIRPCALTEEPGGKALIFEQGDNIRGKVSR 447          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1877.5496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL63_ECTSI2.910e-24486.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMW5_9PHAE3.150e-24086.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2UWN3_9STRA7.140e-15357.54Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0G4FWF9_VITBC7.480e-15357.76Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
W7TT61_9STRA1.070e-13855.03Nadh:ubiquinone oxidoreductase complex i intermedi... [more]
K8YQM7_NANGC6.370e-13455.03Nadh:ubiquinone oxidoreductase complex i intermedi... [more]
A0A6H1TX18_9CYAN2.000e-12552.25NAD(P)H-binding protein n=2 Tax=Oxynema TaxID=1492... [more]
A0A067JBE8_JATCU2.200e-12551.52Uncharacterized protein n=2 Tax=Jatropha curcas Ta... [more]
A0A1U7Z5M1_NELNU2.420e-12452.53uncharacterized protein LOC104586544 n=2 Tax=Nelum... [more]
UPI001686BF084.420e-12453.07CIA30 family protein n=2 Tax=unclassified Microcol... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1877contigL-elsbetiae_contig1877:450..9586 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score667.9
Seed ortholog evalue2.8e-189
Seed eggNOG ortholog2880.D8LL63
Hectar predicted targeting categoryother localisation
EggNOG free text desc.divinyl chlorophyllide a 8-vinyl-reductase activity
EggNOG OGsCOG0702@1,KOG1203@2759
COG Functional cat.GM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1179
Cds size1149
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815781.0954652-CDS-L-elsbetiae_contig1877:449..6261622815781.0954652-CDS-L-elsbetiae_contig1877:449..626Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1877 450..626 -
1691683098.1437361-CDS-L-elsbetiae_contig1877:449..6261691683098.1437361-CDS-L-elsbetiae_contig1877:449..626Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1877 450..626 -
1622815781.106168-CDS-L-elsbetiae_contig1877:971..10851622815781.106168-CDS-L-elsbetiae_contig1877:971..1085Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1877 972..1085 -
1691683098.1557436-CDS-L-elsbetiae_contig1877:971..10851691683098.1557436-CDS-L-elsbetiae_contig1877:971..1085Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1877 972..1085 -
1622815781.1157203-CDS-L-elsbetiae_contig1877:2307..24641622815781.1157203-CDS-L-elsbetiae_contig1877:2307..2464Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1877 2308..2464 -
1691683098.1656635-CDS-L-elsbetiae_contig1877:2307..24641691683098.1656635-CDS-L-elsbetiae_contig1877:2307..2464Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1877 2308..2464 -
1622815781.1251705-CDS-L-elsbetiae_contig1877:3142..32411622815781.1251705-CDS-L-elsbetiae_contig1877:3142..3241Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1877 3143..3241 -
1691683098.177168-CDS-L-elsbetiae_contig1877:3142..32411691683098.177168-CDS-L-elsbetiae_contig1877:3142..3241Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1877 3143..3241 -
1622815781.1364222-CDS-L-elsbetiae_contig1877:4894..51361622815781.1364222-CDS-L-elsbetiae_contig1877:4894..5136Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1877 4895..5136 -
1691683098.186978-CDS-L-elsbetiae_contig1877:4894..51361691683098.186978-CDS-L-elsbetiae_contig1877:4894..5136Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1877 4895..5136 -
1622815781.1458242-CDS-L-elsbetiae_contig1877:5779..59321622815781.1458242-CDS-L-elsbetiae_contig1877:5779..5932Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1877 5780..5932 -
1691683098.1960573-CDS-L-elsbetiae_contig1877:5779..59321691683098.1960573-CDS-L-elsbetiae_contig1877:5779..5932Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1877 5780..5932 -
1622815781.1551554-CDS-L-elsbetiae_contig1877:7018..71261622815781.1551554-CDS-L-elsbetiae_contig1877:7018..7126Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1877 7019..7126 -
1691683098.2047443-CDS-L-elsbetiae_contig1877:7018..71261691683098.2047443-CDS-L-elsbetiae_contig1877:7018..7126Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1877 7019..7126 -
1622815781.1722937-CDS-L-elsbetiae_contig1877:9457..95561622815781.1722937-CDS-L-elsbetiae_contig1877:9457..9556Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1877 9458..9556 -
1691683098.2189636-CDS-L-elsbetiae_contig1877:9457..95561691683098.2189636-CDS-L-elsbetiae_contig1877:9457..9556Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1877 9458..9556 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815781.1844387-UTR-L-elsbetiae_contig1877:9556..95861622815781.1844387-UTR-L-elsbetiae_contig1877:9556..9586Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1877 9557..9586 -
1691683098.2319217-UTR-L-elsbetiae_contig1877:9556..95861691683098.2319217-UTR-L-elsbetiae_contig1877:9556..9586Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1877 9557..9586 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1877.5496.1prot_L-elsbetiae_contig1877.5496.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1877 450..9556 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1877.5496.1

>prot_L-elsbetiae_contig1877.5496.1 ID=prot_L-elsbetiae_contig1877.5496.1|Name=mRNA_L-elsbetiae_contig1877.5496.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=383bp
MLTGGKVPKEGSGLEVVVGDIRDKSSLTPSLFKDVVAVVSCTAAIVRPKE
GDGPDRAKYFQGITFYEPEVADVPKETEFEGVSNLVEAVSRYSDVKGKTL
YACLPSFQEGWRQWGALDDVVMGGVSESGLRVVPGAGEPLSNSDGAPAAA
AAVFAGEVKTSNSGGFVSVRTRNASPPLDLSAYDGLRLRVKGDGNRYKFS
IYDSPGWNSKAWCDSFDTVEGEWMDVDIPFNTLTYNFRTESVKDPPAFSP
STISSFQLMLSKFELDGKLNPNFSAGPFELAISSIKAVSTVAEENQNSRF
VHLSSAGVTRPGRPDLDIDAEPPAVRMNDMLSYLLTYKLKGEDVVRESGI
PSTIIRPCALTEEPNGAPMIVAQGDNIKGKISR
back to top

mRNA from alignment at L-elsbetiae_contig1877:450..9586-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1877.5496.1 ID=mRNA_L-elsbetiae_contig1877.5496.1|Name=mRNA_L-elsbetiae_contig1877.5496.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9137bp|location=Sequence derived from alignment at L-elsbetiae_contig1877:450..9586- (Laminarionema elsbetiae ELsaHSoW15)
CAGGCCCGGAACAAGTCGAAGGCCTTGGCCATGCTGACGGGAGGCAAAGT TCCAAAGGAAGGGTCCGGGCTGGAGGTGGTGGTGGGGGACATCAGGGACA AATCTTCGCTGACGCCCTCGCTCTTCAAGGTCAGACAGGATGCCATGCCG CTTGTTGTAAAAGCGTGTGCTCTTTCGGGGCAGTGAGACAAGATGAGACG TCCTCGTGAAAATGTTATTCAAAGTGGGTAGACAATATGTTGTTGTTCTT GTTGTTCTTGTTGACAGTCTCGTGACAGTCTCGTTGTTGTTGTTGGTCTA GCTGTTGTTCTTGTAGTGGACAGTCTCGTGACAGTCTCGTGACAGTCTCG TTGTTGGTCTTGTTGTTGTTCTTGCCTTCACATTGAAAACCGTCCCGATA TCTCTACCCAGTACCTCCATAGATCTATGTCCGTGCTAGTATGCCGATGT AAGGTGTCCTTTGAGGTTATGTAGACAAAGATAAAATGTGCCAATTTGTT TTTCTTCTTCACATTTATTTCCAGTGTGCTCGATGGACTCTTTGTCACGA GGGCATCTTGCCAGAGTACTGAACCGTGGTCACACAGAAGGGTTCCTTTC CCCAAAGCTGGCCCCCACTTCCCCCTTCTGCGGTGCTTGCCTAAGATTTT TGTCGCGAGAAGGCAATAAAAAATGCTCTTTTCAAGGTTTAAGGACAAGA TAAATGTCAATATGCTTATAAAATGTTATTTTTTAGAGAGGTTGGACAAG GTAAGATTTCAAGTAAAACGTTCCTCACAAGATGAGATGCCAAGTTTAAA ATGTTTTTTTCGGGGTTAGACACGGCGGTAAGATGCCCAAAAACAAGTTT AAATTGTCCCCCCCCCCCACACACACACACACACGGTTCGCTTTGGTCCG TGTCGTTATTTGGGCGGGACTGTCGGTGGGCGCACAGCCGCGATGCAACC GGGCCGCTGTGAGGCAGCTGTTCTTTTTGTGTGTTGTAGGCCGTTCGCTC CCCAACCGTCGTGCATGTCACGTCACCCCGTACTTTACCGATATTCGATG ATACGAGCACCCTTGCCACAAAGTGTCTCTTGTGTGCTGTGCACCCTTGG TAAGTTAGCTGCGGATGCGTTGTAACTCGTGCGTTTTCCTCCCCCATTGT GGTTTTGCCAGCCTGCCGCCCCTCTTGTGGGCCCGAGAAGATGTCTCGAC GCTGCTGTGTTCGGTTCTCTTTTTTAAGTTTTTGGGTAAAATCTCGGAGT CCATCGGCCTAACCCGCTGTCGGACCCCGGCGTTTGCTTTCGTAAAGGTG TAAATATGGAGTCAGCCAGCAGTGGATATTGTGTACCAGGTATTTACACG CTACTTAACATCTTTTTTTTGTAAGCCCCCCCCTCTCTCTCTGCCGTGGG TGTGTTTGCCCGGGTGTGAGCTTGCTTATTTATTCGCGAATGTCAAGCAA TTAGTTGCCTCCCGAGGCTAAACACAGGTGTTGGGCGGTACAAGAAAGCT GCGCTCTTTTCCTCCTTGATGGCAGAACACTTACAGCAGTACCGCGCCAC GACCACTCGGCGCTGTCGCTGTCGCTGCTGCTGCTGCTGCTGCTGCTGCT GCTGCTGCTCTTGCGGCTGTGCAGTATTTCAATTGCAGTATTTGTGTTGG TGTAGGCATCTCCTGTGTTTCGCCGATGACATGGCGAGTAACCTGTTGAG TTGTGTCGTGTCACCAGCTTATCTTAACCTTGGGTATGGGTTACTCAAAC CCAAGACCAGCCCCCCCCCCAAAACATAAAAAGCAAAAAACAAAACACTG CCATCAATGCCACCATTGCGAGACGAGACAGGGATCCGTGTCTTGTCTTG CTGCGCTTACACAACACCTTATGCGGGAGCTTAGCCCGCGACCTAGCACG CTGCCGCCGTCTGCGCCTGGCCCCCATGCGGCTCGCTTCAAATGCCACTG CTGCATGCCGGTAGTTACGGCACGTGTACGCTGGGGACCGTGTGTGCTCG GAGTATTTCACCTCCAAGTTTTCGCTGTGCTATCCCAACGCCGTCTTGTC TTAAATCCTTTCCTAACGCCGTCGTGCATCGATCAAAACCCTTTCCTCTA TCTTGCCCCTGTGCATCAATCAAAACCCTGTCCTATGTAGCGCATCAATT GAGACCCTTTCCTCCTAGCGCTGGCTTGCACCAATCAAAACCCTTTCCTC CCAACGCCGTCTTGCCCCTGCACCAATCAAAACTCTTTCCTCTATCTTGC CCCAGCATCAATCAAAACTCTTTCCTCCTAACGCCGTCTTGCCCCTGCAC CAATCAAAACTCTTTCCTCTATCTTGCCCTAGCATCAATCAAAACCCTTT CCTCCTAACGCCGTGTTGCCCCTGCACAAATCAAAACTGTTTCCTCCTGC AGTAGTAACACCGTGTTGTCCCTACTTAACACCATCAAAAATTCGACTCT TCTTGAGCAGGATGTCGTGGCGGTCGTTTCCTGCACGGCTGCGATAGTGC GGCCCAAAGAGGGTGACGGGCCGGACAGGGCCAAGTACTTCCAGGGCATC ACTTTCTACGAGCCGGAGGTAGGTGCGATCGATGTCATGGCGTCATGGAG GCGAGGTACTGTTGCCGTGGTACGCGGTGACGCGGCGTTGGGCGCTGCCA TTATCTGAGCCGGATGTAGGTGCGATCGATGCCATGATGTCGTGGAGGCG TCATGGTGTTGTCGTGGTACATAATTAGTGATGCGGCGTTGGGCGCTGCC GTTATCTGAGCCGGAGGCAGGTGCGATCGATGTCAAGATGTCGTGGAGGC GTCATGTTGTTGTCGTGGTAGTGATGCGGCGTTGGGCGCTGCCGTTTTCT GAGCCGGAGGTATGTTGGTGCGATCGATGTCATGATGTCGTGGAGGCATC GTGTTGTTGTCGTGGCACATAATTAGTGATGCGGCGTTGGGCGCTGCCGT TATCTCACAGGGTCCCTCGATGACGTGTCATTGGTACCATGATGACGTCA TACTGGTGCCTACAGTACCGTGATGACGTCATGTCGCCCTTTTGTTGTTG TCTGGGACGGAACAACCCGTGGGTTGTCTTGACAGCTTCGCTTACATATT TTCATGCCTCGCTTGTTACAACACGTGTGTACCGCTGTGTGCTCTCCATG CATAGACTTATGTATATATAGATATAACGAAGTAAAAGTGTTTGTGACCA CGGGCCGTGAGTTGCTAGATTTTTGGGATTAGCAATCTCGATTATACGAG CTAACCCTCTAATGTGAAGAAAACAACAAGCAACATACAGCCCACTACTG TGTGACGGGGTTTTTGAGCGTGATGCGGGCAAGTCAAGACCCGGCTGTTA TGACGTGCGGTAGGCACGAGCCTTATGTCAGCGCATCCCCCCCACGGCAG AGGTGGTGCTATTTTCAGGAGTTGGCTACGAGCGTGTCTTGAGTATTTGT TGCTGTCTTTCGAAAAACGATTCAGAAAGTCAAGAGAAGGAGTCTTCCTA CAACAGAAGGCGCGACGCTCTGCAATTCCATTAATCGTGATGTAATATGG GGTATTGTCATCTCTCCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCCTTCTCTCTCTCTCTCTCTCTCTCTATCGGTTTCTGTAAAAACCCAC CAAGGTGGCTGACGTCCCGAAGGAGACTGAGTTCGAAGGGGTTTCCAATT TGGTGGAGGCCGTGTCTCGGTACTCGGACGTTAAGGGGAAGACCCTCTAC GCGTGCCTACCGTCCTTCCAGGAGGGGTGGCGGCAGTGGGGAGCGCTCGA CGACGTGGTAAGGAGGCGTTTAGACACATAGACGGCCGTCCTCTGCCGTG CACGTGTGACTGTGTTGGTGTTGGGAAATGTGAGGCGGTTATATGTTGTT GACCGTGTGATGTTGTTGGTCCTAGCACTACACTGCACCACACTGCACTA CTACACGACACGGCACGACACGACAATACAACACAATTTCAACATAATAC AGCAGTATTGGAGAGGCTGGCTGGCGTGCTGCGTTTAGTAGCACCCGCTG CCTTGAGGTCGCCGTCTTTGCTGTTCTAGTTGCTTCGGCTTGTCCTGTCC TGGGGTGTCGCTCCTCTCGCATCTTGTTGTGCTGCATTTTATGTACATAT TCTGGCATTCAATTTGGTCTTTAATTTGATGCCCACAGAGTATCGGACGG TGTCTACCCAACGACCACAAAACGTCTTGTCACCCATCCACGCCCGCACG CTTTCCATTGCCCTGCTCAGCTCCCCCCCCCCACATACCACATACCCATC CCCATGTTTGTGTGTCTCTCTGCGTCCCGTTATCCTTTTCTCCACCCCAA CAACAACAACAACTCAACAACACGGGACTGTCATCAACAATGGGGCTTTT TCAACAACCACACCACCTTCAATGGGACTGCTGATGTTGCCAACAACAAG GTCATGGGCGGGGTGAGCGAGAGCGGTCTCCGTGTGGTCCCGGGGGCCGG AGAGCCCCTCTCCAACAGTGACGGGGCCCCCGCGGCGGCCGCGGCGGTGT TCGCGGGTGAGGTGAAGACCTCTAACTCGGGGGGGTTCGTGTCTGTACGC ACCCGAAACGCCTCCCCGCCGCTGGACTTGTCGGCCTACGACGGACTGAG GCTGAGGGTCAAGGGAGACGGAAACCGCTACAAGTTTAGCATGTGAGATG CTTTTTCACTCCCACATGTGGAGTCGTTTTTTTTTTTTTGTTTTTCGTTG TTCGCGTTTATTTCCAGTGCTCCTTGCCACGAGGGCATCTTGCCAGAATG CTGAACCGTGATCACACAGAAGGGTTCCTTTCCCCGAGGCCCCCCCTCCC CCCCTTCTGCGGTGCTCGCCTAAGATTTTTAATGGATGTATACTGTTGTA GACAGTCCCGTTGACAGTCCCGTTGACAGTCCCCACTCCCCCCCTTCTGC GGTGCTCGCCTAAGATTTTTAATGGATGTATACTGTTGTAGACAGTCCCG TTGACAGTCCCGTTGACAGTCCCCACTCCCCCCCTTCTGCGGTGCTATAG GACCGAAAAGTCGCTCGGAGCTATGTACATGTGCATTGTCGCCGAAAGTC AGGTTGACCTGTTTTGTGGGGCTTTTTGGCTCCTGGTGTGTTTCTCAAGT TGTTGTCGTTTGATGTGCATGAGGTCGTGGTTGCGGCAAGTGCCGAAGGT ATCGGTAGCCGTGAGTGTGTTGTTGTTGTTGTTGTTGTTGGTGGTGGTGG TGGTGGTGATGATGGTGTTGATAGGCCCTCGTTGGCGTCTGTCCGGTTCA ATACGGTGTGTTGGGGTCGGAGGCGCGGAAGAGTCGCGTCGAAGCTTGGA GGTGTTAAAACGACCTCCATTCATTTTTCAGCAGTCTCTTACCAGTACCC TTTTTTAGGGTAAGTTATCCAGTGACCACAGGAATCGACCGCGTCAGTGT TGGATTAGTACGGATTCATGGAGGTGTACTGGGTAGAGAGATGGGAGCGG TTTTTAATGTGAAGACAGTACACACACACACACATCCCTACCCGCACGTT CGTAGCATGTGTGAGACCCCGCGCGGGACGCGCATCATGAGCGAACGGGG AACGGTGAACGCTTGAATGTGGATCCCTGCTGCTGTTGTAGCGTTGCTAT TTATTGCACCAAATACTTACATACTCCTGGGGGCATTTTCTTTTTAGTTA ACCTTTGCTGTGAGGTAAAGTTAGCCTGTGACGAAGGGAGAGATCGACCG TACCTTGTCATGCGATTGGATGAGTACGGGCGAATAAAGGTATTGAATCG AGAGAGAGATCGCAGACGGTTTTTGACGCAACGACGAATGAAGGTACTGA GACGAATGGAGGTACTGAGTCGAGAGAGAGACCGCAGCCGGTTTTGACGC AACGACGAATGGAGGTACTGAGACGAATGGAGGTACTGAGTCGAGAGAGA GACCGCAGCCGGTTTTGACGCAACGACGAAAGAAGGTACTGAGACGCATG AAGGTACTGAGACGAATGAAGGTACTGAGATGTATGAAGGTACTGAGTCG AGAGAGAAACCGCAGACGGTTTTGACGCAACGACGACAACAACAAAAACA ACAGCAATAGCAACGAGCAAGTTTGAACAATACCAAATCATTCCCGCGCT TCTGTTCTTCTGCAGACCTGACCTGCCTGTCTTGTGTCGCCCTGCTCGGG TCCTTACTTGCGTGCCCTCTCTTTTCTTCCTCTTCTTGGCTATTTTGGGG CCATCCGACAACCAATGCGCTTGGCGACGCTGTCACTCTTCGGTGGATCT GTTTTGCATTTATCTAAAATTGATCTGACGGCGTCGTCGGTCCAGCTACG ACTCTCCTGGCTGGAACAGCAAGGCTTGGTGCGACAGTTTCGACACCGTG GAGGGCGAGTGGATGGACGTCGACATCCCCTTCAACACTCTCACGTGAGT TAGACAGACGGCGGCAGCAGCAGCAAGCAGTGCTCCTTTTTAAGTGTTTC ATGCTAGACGTCGGCGGTTCGATTTACGTGTCCAGCCTGCGAAGAGGGGA CTAACGTATACGACACAAGATAACCCCCCCCCCCCCCCCTGGACCGATTT CCCAAGCTCGATTGCTCCGCAACGAGTATGATGCTAATACCAAACGACAC GTTTTCGGACAGCTCTTGATGAGATCTTTCCAACGCCGCCCCTTTCGGGA CTGACACTTCTCTCGCTGTGGAGAAATTGAGCTTTGAAAACCGGTCCAGG GGGTGTGTTATCTTGTGTCGTATACGGTACCGCCGCTGCTGTACATAGGC AAATTGATATTCTCTCACCCCCCAGGCTACGGCAGTGGCAGGTACAAAAC CCACGATCCGCGCAGTTGTGTTGTTTTTCGTCTGTTCAGGGGGTGTGTTA TCTAACGTATTTTGTTTTTGGCCGTGTTGGCGCCGGCATGGAGGACGACA CGACGCGTTGGCTGGATGTGCATGCCGTCTGCGGTGGGAAGAATGGCGAC ATCTCCATCTTTCTTGCTTCGCTGTTGTCCTCAGACATCTCTCTTGCCTC ACCGCTGTCCTCAGTGTTTCGTGACTCCACTGACGGTGCGGCGTACCTGC CGTGGTCCCCCCCGTGTTGCAGATACAACTTTCGCACGGAGTCCGTCAAG GACCCGCCGGCTTTCTCGCCGAGCACCATCAGCTCCTTTCAGCTCATGCT TTCCAAGTTCGAGCTGGACGGGAAGCTTAACCCGAACTTCTCCGCGGGAC CGTTCGAGCTGGCAATCTCGTCGATAAAGGTGAAGAGTTAGGCTTGAATG TATTACTTGTCTAGGTAACTTCCTGGCGTTTTACGGGGGGTTGGTGTTGT TGACAACAGTCTCGTTGTTGCTGACAGTCCCGCGGAGGTCGTTCGGGTTG ACCATATCGTCGATAAAGGTGCTTGCGTGCACAGTAGTGCACACAGGCTT CGGTGTTGTTGACAGTCTCGTTGGTTGCTGACAGTCCGGAAGGACTATTC GAGTTGACCCTCTCGCCGATAAAGGTGCTTGCGTACACAAGCTTCGGTGT TGTTGACAGTGCCGTTGTTGCTGACAGTCTCGTTGTTGCTGACAGTCCGG AAGGGCCATTCGAGTTGAACCTCTCGCCGATAAAGGTGCTTGCGTACACA GGCGTTGCTGACAGTCCCGCGGGATCTTTCCAGTTGACCATCTCGTCGAT AAAAGATAAAAGGTGCAAAGGTATGGTACTGATCTGTGGACAGATATGCC ATGCGTGCACAGGCTTGTTGTGTTGCTGTTGCTGTCGCCGTCGTCGTTAT TTCGATCACGCCAGACCAAGGCAAATTAAACAGTATTTCCGATGTCTTTC TCGCAAACCATGCCCACCCTCCGAAGTACGCTGCGCTCTGCCATCATTTG TATTGTATGTTTTATTTTTATTTCTAACTCCAGTCGCATACCTTTTGTGA GGGTATACACAACAGTGGCGTTGTAATGTTTTTTTTTTTTTTTTTACAAT ACTGTAGCTGAATCTATTTTTCGCGGATACATCGGACAAGTGGAGTTCAG GCGCATCACGCGCGGCAATCGCCTTTTTAAACGGTTGTGAGGGCCGAGAG GTGCGTGTTCCGTGAGCTTTCGGAACAACAGCCTCCTTTCTTGGCCACTT CGCATTCACGAGCTCCACGTTCACCAGCCCTGCAGATACACACCTCCTGT TTGCCTGTGGCTGTTTCCCAGTTGAACCCCCCTTGCCACCCCCCCCCCAA ATACCCCGAAGTATTGGCATCGACCTCTTCTCCAAAAGTAGATTTTTAAT CTCCGTGTGTATGTACATAATACTCCAATATACACTTTTATACAGATAGT TCGGTCGCAACAAAAAAAAAACCGATGTCTTGTCTTGCTCGTGGCCTCTT TTGTTCGCCCACCTGTCGCCCGGTTTCCCAACGTGCCGGCTCTTCTTGCC CTCCCGCCCGTGCGTTTTTTCGGCGTGCGTGCGTGCGTGCGTGTCGTTCA GGCGGTGTCGACCGTCGCTGAGGAGAATCAGAACTCGCGCTTCGTTCACC TTAGCTCGGCAGGGGTGACCAGGCCAGGAAGGCCTGATCTAGACATCGAC GCGGAGCCCCCGGCGGTAAGCAACACCCCCCCCCCCCCCCCCCCCCCCAG AGCAAGATAAGCCCAGACATCGAGGGGGGTCACCAGGATTGCAGGGCTGG ATACACCGCGCCCCCGCCGCCCCCCATCATCAGGAAATGATAGCTATGTT CAGACCCCGTGAAATGGGAATATTTTTATGTGTAGATATGGATTTACAGG TTTAATCTGAAGATTCAACATAATTTGTTATTTCCCGCCATGAACTGATC AAGCGAGCAAACATCGTAAACACTGTTTTCCGTTTTTTTCGCCACCCACC CACCCACCCACACACACACCCACACACCCACACACCCACACACCCACACG CACACGAAAGGTGCGCATGAACGACATGCTGTCGTACCTGCTGACGTACA AGCTCAAGGGGGAGGACGTCGTCCGCGAGAGCGGCATACCCTCCACAATA ATCAGGCCGTGCGCGCTCACCGAAGAGCCCAACGGGGCGCCGATGATCGT TGCTCAGGGGGACAACATCAAGGGCAAGATTAGCAGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1877:450..9586-

>mRNA_L-elsbetiae_contig1877.5496.1 ID=mRNA_L-elsbetiae_contig1877.5496.1|Name=mRNA_L-elsbetiae_contig1877.5496.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2298bp|location=Sequence derived from alignment at L-elsbetiae_contig1877:450..9586- (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGACGGGAGGCAAAGTTCCAAAGGAAGGGTCCGGGCTGGAGGTGGT
GGTGGGGGACATCAGGGACAAATCTTCGCTGACGCCCTCGCTCTTCAAGA
TGCTGACGGGAGGCAAAGTTCCAAAGGAAGGGTCCGGGCTGGAGGTGGTG
GTGGGGGACATCAGGGACAAATCTTCGCTGACGCCCTCGCTCTTCAAGGA
TGTCGTGGCGGTCGTTTCCTGCACGGCTGCGATAGTGCGGCCCAAAGAGG
GTGACGGGCCGGACAGGGCCAAGTACTTCCAGGGCATCACTTTCTACGAG
CCGGAGGATGTCGTGGCGGTCGTTTCCTGCACGGCTGCGATAGTGCGGCC
CAAAGAGGGTGACGGGCCGGACAGGGCCAAGTACTTCCAGGGCATCACTT
TCTACGAGCCGGAGGTGGCTGACGTCCCGAAGGAGACTGAGTTCGAAGGG
GTTTCCAATTTGGTGGAGGCCGTGTCTCGGTACTCGGACGTTAAGGGGAA
GACCCTCTACGCGTGCCTACCGTCCTTCCAGGAGGGGTGGCGGCAGTGGG
GAGCGCTCGACGACGTGGTGGCTGACGTCCCGAAGGAGACTGAGTTCGAA
GGGGTTTCCAATTTGGTGGAGGCCGTGTCTCGGTACTCGGACGTTAAGGG
GAAGACCCTCTACGCGTGCCTACCGTCCTTCCAGGAGGGGTGGCGGCAGT
GGGGAGCGCTCGACGACGTGGTCATGGGCGGGGTGAGCGAGAGCGGTCTC
CGTGTGGTCCCGGGGGCCGGAGAGCCCCTCTCCAACAGTGACGGGGCCCC
CGCGGCGGCCGCGGCGGTGTTCGCGGGTGAGGTGAAGACCTCTAACTCGG
GGGGGTTCGTGTCTGTACGCACCCGAAACGCCTCCCCGCCGCTGGACTTG
TCGGCCTACGACGGACTGAGGCTGAGGGTCAAGGGAGACGGAAACCGCTA
CAAGTTTAGCATGTCATGGGCGGGGTGAGCGAGAGCGGTCTCCGTGTGGT
CCCGGGGGCCGGAGAGCCCCTCTCCAACAGTGACGGGGCCCCCGCGGCGG
CCGCGGCGGTGTTCGCGGGTGAGGTGAAGACCTCTAACTCGGGGGGGTTC
GTGTCTGTACGCACCCGAAACGCCTCCCCGCCGCTGGACTTGTCGGCCTA
CGACGGACTGAGGCTGAGGGTCAAGGGAGACGGAAACCGCTACAAGTTTA
GCATCTACGACTCTCCTGGCTGGAACAGCAAGGCTTGGTGCGACAGTTTC
GACACCGTGGAGGGCGAGTGGATGGACGTCGACATCCCCTTCAACACTCT
CACCTACGACTCTCCTGGCTGGAACAGCAAGGCTTGGTGCGACAGTTTCG
ACACCGTGGAGGGCGAGTGGATGGACGTCGACATCCCCTTCAACACTCTC
ACATACAACTTTCGCACGGAGTCCGTCAAGGACCCGCCGGCTTTCTCGCC
GAGCACCATCAGCTCCTTTCAGCTCATGCTTTCCAAGTTCGAGCTGGACG
GGAAGCTTAACCCGAACTTCTCCGCGGGACCGTTCGAGCTGGCAATCTCG
TCGATAAAGATACAACTTTCGCACGGAGTCCGTCAAGGACCCGCCGGCTT
TCTCGCCGAGCACCATCAGCTCCTTTCAGCTCATGCTTTCCAAGTTCGAG
CTGGACGGGAAGCTTAACCCGAACTTCTCCGCGGGACCGTTCGAGCTGGC
AATCTCGTCGATAAAGGCGGTGTCGACCGTCGCTGAGGAGAATCAGAACT
CGCGCTTCGTTCACCTTAGCTCGGCAGGGGTGACCAGGCCAGGAAGGCCT
GATCTAGACATCGACGCGGAGCCCCCGGCGGCGGTGTCGACCGTCGCTGA
GGAGAATCAGAACTCGCGCTTCGTTCACCTTAGCTCGGCAGGGGTGACCA
GGCCAGGAAGGCCTGATCTAGACATCGACGCGGAGCCCCCGGCGGTGCGC
ATGAACGACATGCTGTCGTACCTGCTGACGTACAAGCTCAAGGGGGAGGA
CGTCGTCCGCGAGAGCGGCATACCCTCCACAATAATCAGGCCGTGCGCGC
TCACCGAAGAGCCCAACGGGGCGCCGATGATCGTTGCTCAGGGGGACAAC
ATCAAGGGCAAGATTAGCAGGGTGCGCATGAACGACATGCTGTCGTACCT
GCTGACGTACAAGCTCAAGGGGGAGGACGTCGTCCGCGAGAGCGGCATAC
CCTCCACAATAATCAGGCCGTGCGCGCTCACCGAAGAGCCCAACGGGGCG
CCGATGATCGTTGCTCAGGGGGACAACATCAAGGGCAAGATTAGCAGG
back to top