mRNA_L-elsbetiae_contig18764.5493.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18764.5493.1 vs. uniprot
Match: A0A6H5KW83_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW83_9PHAE) HSP 1 Score: 240 bits (613), Expect = 1.760e-67 Identity = 145/247 (58.70%), Postives = 157/247 (63.56%), Query Frame = 1 Query: 16 QLPQYIISDFNTFVCTACSGIHREFSHRVKSISLATFTQEEVAAVKAGGNEANNKLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRWYGTPGDLEKEKQREAEXXXXXXXQGAKXXXXR---------QERPGSAGRPRRGTVNRSLRKVEPTAAAA---VKPPDAPPAKQVDLLDLLSDAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXPGPASGFASWAAFGDAPA 720 +LPQYIISDFNTFVCTACSGIHREFSHRVKSISLATF++EEVAAVKAGGNEA+NKLYMARYRPGHDLPEPEGGRA KHREFIRTKYVDKRWYGTP DL +++QREAE + A+ Q R SA RPR+G +R LRKVEP A VK P P AKQVDLLD LSD PA G A+GFASWAAFGD PA Sbjct: 38 RLPQYIISDFNTFVCTACSGIHREFSHRVKSISLATFSEEEVAAVKAGGNEASNKLYMARYRPGHDLPEPEGGRAAKHREFIRTKYVDKRWYGTPEDLAQDRQREAEREESRAKRDAERGSSXXXXXXXXXXQPRSASAARPRKGGGDRGLRKVEPAAXXXXXXVKVPPVP-AKQVDLLDFLSDDPAPPPAAPVQPAGAVAAPAQTQPWDAFGAPAPTPAAAAPAV----GTAAGFASWAAFGDDPA 279
BLAST of mRNA_L-elsbetiae_contig18764.5493.1 vs. uniprot
Match: D8LD15_ECTSI (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD15_ECTSI) HSP 1 Score: 206 bits (523), Expect = 4.260e-60 Identity = 124/172 (72.09%), Postives = 134/172 (77.91%), Query Frame = 1 Query: 16 QLPQYIISDFNTFVCTACSGIHREFSHRVKSISLATFTQEEVAAVKAGGNEANNKLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRWYGTPGDLEKEKQREAEXXXXXXXQGAKXXXXRQERPGSAG---------RPRRGTVNRSLRKVEPTAAAAVKPPDAPPAKQ 504 +LPQ+IISDFNTFVCTACSGIHREFSHRVKSISLATF++EEVAAVKAGGNE +NKLYMARYRPGHDLPEPEGGRA KHREFIRTKYVDKRWYGTP DL ++QREA XXXXXXX XXXX RPR+ + +R LRKVEP AAA PP PAKQ Sbjct: 38 RLPQWIISDFNTFVCTACSGIHREFSHRVKSISLATFSEEEVAAVKAGGNETSNKLYMARYRPGHDLPEPEGGRAAKHREFIRTKYVDKRWYGTPEDLANDRQREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPRKASGDRGLRKVEPAAAAVKAPPV--PAKQ 207
BLAST of mRNA_L-elsbetiae_contig18764.5493.1 vs. uniprot
Match: A0A836C8Y8_9STRA (Putative GTPase activating protein for Arf-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Y8_9STRA) HSP 1 Score: 147 bits (371), Expect = 4.170e-39 Identity = 66/106 (62.26%), Postives = 82/106 (77.36%), Query Frame = 1 Query: 16 QLPQYIISDFNTFVCTACSGIHREFSHRVKSISLATFTQEEVAAVKAGGNEANNKLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRWYGTPGDLEKEKQREA 333 +LP YI+ DF TFVCTACSGIHREFSHR+KS+SLA FT +EV A++ GGN A+N L++A+Y P DLPEP+G EK REFIR KY +KRWY T DL +E + +A Sbjct: 29 RLPNYIVLDFKTFVCTACSGIHREFSHRIKSVSLANFTDDEVRAIRKGGNRASNDLWLAKYDPDRDLPEPDGSSVEKRREFIRMKYQEKRWYATTEDLAREAEEQA 134
BLAST of mRNA_L-elsbetiae_contig18764.5493.1 vs. uniprot
Match: A0A7S1TS41_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TS41_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.250e-25 Identity = 51/93 (54.84%), Postives = 63/93 (67.74%), Query Frame = 1 Query: 13 LQLPQYIISDFNTFVCTACSGIHREFSHRVKSISLATFTQEEVAAVKAGGNEANNKLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRWY 291 ++LPQY+ FN+FVC CSGIHREF+HRVK IS++ F EEV ++ GGNEA N +YMAR+ G D K R FIR KY+DKRWY Sbjct: 65 VKLPQYVCVPFNSFVCLTCSGIHREFAHRVKGISMSDFAPEEVTKLEGGGNEACNNVYMARFPQGADARPVSSENENKLRSFIRHKYIDKRWY 157
BLAST of mRNA_L-elsbetiae_contig18764.5493.1 vs. uniprot
Match: A0A4D9DD40_9STRA (Arf-GAP domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DD40_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.300e-25 Identity = 56/92 (60.87%), Postives = 72/92 (78.26%), Query Frame = 1 Query: 16 QLPQYIISDFNTFVCTACSGIHREFSHRVKSISLATFTQEEVAAVKAGGNEANNKLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRWY 291 +LPQY+ FNTF+CTACSGIHREFSHRVKSISL+TF+ EEV A+K GGNEA +Y+AR+ P D EP+ G + R++IR KYV++RW+ Sbjct: 34 KLPQYVNLTFNTFICTACSGIHREFSHRVKSISLSTFSLEEVKALKDGGNEACAAMYLARWEP-RDYAEPQAGDEHRIRDWIRHKYVERRWH 124
BLAST of mRNA_L-elsbetiae_contig18764.5493.1 vs. uniprot
Match: A0A7S3YB30_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YB30_HETAK) HSP 1 Score: 108 bits (271), Expect = 7.020e-25 Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = 1 Query: 16 QLPQYIISDFNTFVCTACSGIHREFSHRVKSISLATFTQEEVAAVKAGGNEANNKLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRW 288 +LPQY F+TFVCTACSGIHREFSHRVKS+SL+ FT +E A +K GGNEA Y+A++R G D P G R++IR KY+DKR+ Sbjct: 32 KLPQYANLTFHTFVCTACSGIHREFSHRVKSVSLSNFTDDEYAGLKKGGNEAAAAKYLAKHREGRDPAPPRPGDTAAVRDWIRAKYLDKRF 122
BLAST of mRNA_L-elsbetiae_contig18764.5493.1 vs. uniprot
Match: A0A7J6MV98_PEROL (Arf-GAP domain-containing protein n=5 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6MV98_PEROL) HSP 1 Score: 116 bits (290), Expect = 1.800e-24 Identity = 51/95 (53.68%), Postives = 70/95 (73.68%), Query Frame = 1 Query: 22 PQYIISDFNTFVCTACSGIHREFSHRVKSISLATFTQEEVAAVKAGGNEANNKLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRWYGTPGD 306 P YI +DF TFVCT C+GIHRE +H+VK IS++ +T++EV ++A GN + ++YMA YRPG DL EP ++ R+F++ KYVDKRW GTP D Sbjct: 40 PTYICTDFGTFVCTECAGIHRELNHKVKGISVSKWTEQEVENLEAHGNTKDREMYMANYRPGIDLAEPNNQDRQRLRDFMKLKYVDKRWAGTPPD 134
BLAST of mRNA_L-elsbetiae_contig18764.5493.1 vs. uniprot
Match: A0A0M0K2F0_9EUKA (Arf gtpase activating protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K2F0_9EUKA) HSP 1 Score: 108 bits (270), Expect = 2.320e-24 Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 1 Query: 25 QYIISDFNTFVCTACSGIHREFSHRVKSISLATFTQEEVAAVKAGGNEANNKLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRWYG-TPG 303 QY++ +FNTFVCTACSGIHRE H++KS+ ++TFT +E+ AV AGGN+ K++MA+Y D P G EK R F++ KY +KRWY TPG Sbjct: 36 QYVVLNFNTFVCTACSGIHREMQHKIKSVGMSTFTTDEIKAVDAGGNDKAQKMWMAKY-DARDGAVPAEGETEKLRAFLKRKYQEKRWYSETPG 128
BLAST of mRNA_L-elsbetiae_contig18764.5493.1 vs. uniprot
Match: A0A7J6QZC8_PEROL (Arf-GAP domain-containing protein n=4 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6QZC8_PEROL) HSP 1 Score: 114 bits (284), Expect = 1.080e-23 Identity = 50/95 (52.63%), Postives = 69/95 (72.63%), Query Frame = 1 Query: 22 PQYIISDFNTFVCTACSGIHREFSHRVKSISLATFTQEEVAAVKAGGNEANNKLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRWYGTPGD 306 P YI +DF TFVCT C+GIHRE +H+VK IS++ +T++EV ++A GN + + YMA YRPG DL EP ++ ++F++ KYVDKRW GTP D Sbjct: 40 PTYICTDFGTFVCTECAGIHRELNHKVKGISVSKWTEQEVENLEAHGNTKDRETYMANYRPGIDLAEPNNQDRQRLKDFMKLKYVDKRWAGTPPD 134
BLAST of mRNA_L-elsbetiae_contig18764.5493.1 vs. uniprot
Match: C5L0X6_PERM5 (Stromal membrane-associated protein, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5L0X6_PERM5) HSP 1 Score: 112 bits (280), Expect = 2.290e-23 Identity = 50/95 (52.63%), Postives = 68/95 (71.58%), Query Frame = 1 Query: 22 PQYIISDFNTFVCTACSGIHREFSHRVKSISLATFTQEEVAAVKAGGNEANNKLYMARYRPGHDLPEPEGGRAEKHREFIRTKYVDKRWYGTPGD 306 P YI +DF TFVCT C+GIHRE +H+VK IS++ +TQ+EV ++A GN + ++YMA YRPG DL EP ++ REF++ KYVDKRW + D Sbjct: 38 PTYICTDFGTFVCTECAGIHRELTHKVKGISVSKWTQQEVEHLEAHGNTRDREIYMANYRPGIDLAEPNNQDRQRLREFMKLKYVDKRWAASQSD 132 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18764.5493.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18764.5493.1 >prot_L-elsbetiae_contig18764.5493.1 ID=prot_L-elsbetiae_contig18764.5493.1|Name=mRNA_L-elsbetiae_contig18764.5493.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=444bp MVLRLQLPQYIISDFNTFVCTACSGIHREFSHRVKSISLATFTQEEVAAVback to top mRNA from alignment at L-elsbetiae_contig18764:1296..2798+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18764.5493.1 ID=mRNA_L-elsbetiae_contig18764.5493.1|Name=mRNA_L-elsbetiae_contig18764.5493.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1503bp|location=Sequence derived from alignment at L-elsbetiae_contig18764:1296..2798+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18764:1296..2798+ >mRNA_L-elsbetiae_contig18764.5493.1 ID=mRNA_L-elsbetiae_contig18764.5493.1|Name=mRNA_L-elsbetiae_contig18764.5493.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2664bp|location=Sequence derived from alignment at L-elsbetiae_contig18764:1296..2798+ (Laminarionema elsbetiae ELsaHSoW15)back to top |