prot_L-elsbetiae_contig1875.5486.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1875.5486.1
Unique Nameprot_L-elsbetiae_contig1875.5486.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length121
Homology
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BLAST of mRNA_L-elsbetiae_contig1875.5486.1 vs. uniprot
Match: D8LG94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG94_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 3.150e-29
Identity = 86/119 (72.27%), Postives = 95/119 (79.83%), Query Frame = 0 
Query:    2 LHGGLVNLLYDDGERETRVSLSLVRHRGAPAPWCSDSDASSGSDRSEEGAEAEVRGLQVPREKKNQAGGWEVIIQKPKKTRVERVESRXXXXXXXXXXXXXXXXXXXEVAAREALRKKL 120
            LHGG VNLLYDDGERETRV L+LVRHRGA A    DSD+    D S+EGAEA    L   +++  QA GWEV++QKPKKTRVERVESR  XXXXXXXXXXXXXXXXXE+AAREALRKKL
Sbjct:  188 LHGGFVNLLYDDGERETRVPLALVRHRGATAAMTMDSDS---GDSSDEGAEAPR--LPTAKQRSKQADGWEVMVQKPKKTRVERVESRIEXXXXXXXXXXXXXXXXXELAAREALRKKL 301
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1875.5486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LG94_ECTSI3.150e-2972.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1875contigL-elsbetiae_contig1875:8228..9452 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1875.5486.1mRNA_L-elsbetiae_contig1875.5486.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1875 7302..9452 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1875.5486.1 ID=prot_L-elsbetiae_contig1875.5486.1|Name=mRNA_L-elsbetiae_contig1875.5486.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp
TLHGGLVNLLYDDGERETRVSLSLVRHRGAPAPWCSDSDASSGSDRSEEG
AEAEVRGLQVPREKKNQAGGWEVIIQKPKKTRVERVESRVEANSNLKNRL
KRQKKREKEVAAREALRKKL*
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