prot_L-elsbetiae_contig1871.5472.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1871.5472.1
Unique Nameprot_L-elsbetiae_contig1871.5472.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length131
Homology
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BLAST of mRNA_L-elsbetiae_contig1871.5472.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 1.030e-5
Identity = 48/141 (34.04%), Postives = 59/141 (41.84%), Query Frame = 0 
Query:   12 RVARLLVDAGANTAESKARLTNKEGKVVVNDTVLTLTTRNIRSKKVAGRDAT----------------------AGWRVPPAAVECGHSSCCLLAVAQRRPLDRPESRGRATATLTPITVMLPILKRRARRSRVLVAATFR 130
            R+ RLLVDAGA+T  S  R+TN  G V  NDT L +TT  +R K V G+ AT                        W  P  A    H+         RRP               P+++ LPILKRRA+   V VA   R
Sbjct:   79 RIVRLLVDAGADTT-STVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWPSDAPSIVHAVERSCGPEPRRP---------------PLSLTLPILKRRAKTCHVFVATLLR 203
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1871.5472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSC5_ECTSI1.030e-534.04EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1871contigL-elsbetiae_contig1871:11775..12167 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1871.5472.1mRNA_L-elsbetiae_contig1871.5472.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1871 11667..12170 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1871.5472.1 ID=prot_L-elsbetiae_contig1871.5472.1|Name=mRNA_L-elsbetiae_contig1871.5472.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp
MGCIAHPLRCTRVARLLVDAGANTAESKARLTNKEGKVVVNDTVLTLTTR
NIRSKKVAGRDATAGWRVPPAAVECGHSSCCLLAVAQRRPLDRPESRGRA
TATLTPITVMLPILKRRARRSRVLVAATFR*
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