prot_L-elsbetiae_contig1871.5470.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1871.5470.1
Unique Name	prot_L-elsbetiae_contig1871.5470.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	295

Homology

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BLAST of mRNA_L-elsbetiae_contig1871.5470.1 vs. uniprot
Match: D7FUZ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ2_ECTSI)

HSP 1 Score: 338 bits (867), Expect = 2.850e-112
Identity = 224/286 (78.32%), Postives = 237/286 (82.87%), Query Frame = 0

Query:    9 QAAHSELARERAANEEAASRASKAERELDQARAKAAVLDNKLAALEKDKLELLADANASKARAGALEEKFSTARIAEAAAAEARXXXXXXXXXSLEREKTDAVSRMEEALAKAAXXXXXXXXAVKTEEEARAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEIIVTKYADLKVKMAMMEAEKDGEADLKDEWQSDDKGGKGGGKGKVSEAAKRALRENTELHGRVAAMTETLQMRMHQLEGQRQSNEFLLKRVEELEQQVASTSGKMAIGTD 294
            + AHSELA+ERA  EEAA+RASKAERELDQARA+AAVLDNKLA LEKDKLELLADAN+S+ARA ALEEK+S AR AEA  +E  XXXXXXXXX                     XXXX    AVK EE+ RAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIE IVTKYADLKVKMA MEAEKDG ADL DEWQS+ KG +G G  KVSEAAKRALRENTELHGRVAAMTE+LQMR HQLEGQRQSNEFLLKRVEELEQQVA+TSGK AIGTD
Sbjct:   96 EVAHSELAKERAGAEEAAARASKAERELDQARARAAVLDNKLATLEKDKLELLADANSSRARASALEEKYSAARAAEAVESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADKAVKMEEDTRAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEAIVTKYADLKVKMATMEAEKDGAADLVDEWQSNSKGERGEGGRKVSEAAKRALRENTELHGRVAAMTESLQMRAHQLEGQRQSNEFLLKRVEELEQQVATTSGKTAIGTD 381

[Close]

BLAST of mRNA_L-elsbetiae_contig1871.5470.1 vs. uniprot
Match: A0A6H5JZQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ7_9PHAE)

HSP 1 Score: 340 bits (873), Expect = 2.540e-104
Identity = 225/284 (79.23%), Postives = 238/284 (83.80%), Query Frame = 0

Query:   11 AHSELARERAANEEAASRASKAERELDQARAKAAVLDNKLAALEKDKLELLADANASKARAGALEEKFSTARIAEAAAAEARXXXXXXXXXSLEREKTDAVSRMEEALAKAAXXXXXXXXAVKTEEEARAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEIIVTKYADLKVKMAMMEAEKDGEADLKDEWQSDDKGGKGGGKGKVSEAAKRALRENTELHGRVAAMTETLQMRMHQLEGQRQSNEFLLKRVEELEQQVASTSGKMAIGTD 294
            AHSELA+ERA  EEA +RASKAERELDQARA+AAVL+NKLA LEKDKLELLADAN+S+ARA ALEEK+S AR AEAA +   XXXXXXXXX    E   AV           XXXX    AVK EE+ RAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIE IVTKYADLKVKMA MEAEKDG ADL DEWQS+ KG +G G  KVSEAAKRALRENTELHGRVAAMTE+LQMR HQLEGQRQSNEFLLKRVEELEQQVA+TSGK AIGTD
Sbjct: 1057 AHSELAKERAGAEEAVARASKAERELDQARARAAVLENKLATLEKDKLELLADANSSRARASALEEKYSAARAAEAAESXXXXXXXXXXXXXXXSENLKAVXXXXXXXXXXXXXXXRADKAVKMEEDTRAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEAIVTKYADLKVKMAAMEAEKDGAADLVDEWQSNSKGERGEGGRKVSEAAKRALRENTELHGRVAAMTESLQMRAHQLEGQRQSNEFLLKRVEELEQQVATTSGKTAIGTD 1340

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1871.5470.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1871.5470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FUZ2_ECTSI	2.850e-112	78.32	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JZQ7_9PHAE	2.540e-104	79.23	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 86..155
None	No IPR available	COILS	Coil	Coil	coord: 261..288
None	No IPR available	COILS	Coil	Coil	coord: 15..70

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1871	contig	L-elsbetiae_contig1871:795..4886 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1871.5470.1	mRNA_L-elsbetiae_contig1871.5470.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1871 795..4886 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1871.5470.1 ID=prot_L-elsbetiae_contig1871.5470.1|Name=mRNA_L-elsbetiae_contig1871.5470.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=295bp
MSLHGTGPQAAHSELARERAANEEAASRASKAERELDQARAKAAVLDNKL
AALEKDKLELLADANASKARAGALEEKFSTARIAEAAAAEARVSELEEQV
SSLEREKTDAVSRMEEALAKAAAAEAKAAAAVKTEEEARAEMAGKTEEVM
RLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEIIVTKYADLKVKMAMM
EAEKDGEADLKDEWQSDDKGGKGGGKGKVSEAAKRALRENTELHGRVAAM
TETLQMRMHQLEGQRQSNEFLLKRVEELEQQVASTSGKMAIGTD*