prot_L-elsbetiae_contig1865.5454.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1865.5454.1
Unique Nameprot_L-elsbetiae_contig1865.5454.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length232
Homology
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BLAST of mRNA_L-elsbetiae_contig1865.5454.1 vs. uniprot
Match: A0A6H5KVF7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF7_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 1.820e-21
Identity = 56/82 (68.29%), Postives = 61/82 (74.39%), Query Frame = 0 
Query:    1 ALLLGIRFSKDRGDVNTRLRHLHDFASSELDRFSSEKAGAVALLALCGVQMGVQIRLGRPRGVLGTAKRVSALILSVPGLAR 82
            A LL IRFS+DRGDV TRL HLHDFA+SEL RF  E  GAVALLAL G  MGVQIRLGR  G+L TA+  S+LI   PGL R
Sbjct:  380 AQLLTIRFSRDRGDVATRLWHLHDFATSELRRFRQEGKGAVALLALIGPLMGVQIRLGRLDGILATAELASSLIRKCPGLVR 461
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BLAST of mRNA_L-elsbetiae_contig1865.5454.1 vs. uniprot
Match: D8LS51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS51_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 5.300e-5
Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0 
Query:   93 LAVFRLHGLVEEYEALRTLLSKTTGETPPAFQDMQPKKP-LCGLVVCCLHADRLLSM 148
            +AVFRL+G  + Y+ALR LL+KT  +  PAF+DM P     C L +C  H  +LL M
Sbjct:    1 MAVFRLYGRRDAYDALRDLLAKTIQQDTPAFEDMSPSTSRFCDLPMCASHLRKLLKM 57
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1865.5454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVF7_9PHAE1.820e-2168.29Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LS51_ECTSI5.300e-547.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1865contigL-elsbetiae_contig1865:9531..10964 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1865.5454.1mRNA_L-elsbetiae_contig1865.5454.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1865 9530..10964 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1865.5454.1 ID=prot_L-elsbetiae_contig1865.5454.1|Name=mRNA_L-elsbetiae_contig1865.5454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp
ALLLGIRFSKDRGDVNTRLRHLHDFASSELDRFSSEKAGAVALLALCGVQ
MGVQIRLGRPRGVLGTAKRVSALILSVPGLARIYHSHAVHLSLAVFRLHG
LVEEYEALRTLLSKTTGETPPAFQDMQPKKPLCGLVVCCLHADRLLSMEV
LPPPPPPGGTAASPEAPPGVVGTNGACGAPDTAWAAGASSSGEGACATLA
PASTTPAPATDCSSRGGGGGGGGGGVKAAIKR
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