mRNA_L-elsbetiae_contig18644.5452.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE) HSP 1 Score: 364 bits (935), Expect = 1.320e-118 Identity = 214/303 (70.63%), Postives = 240/303 (79.21%), Query Frame = 1 Query: 61 MTTRTIKINFQGASRDVDLPSPFTLAGLQQAIASTFGTELPARSGADEAAKDGDLSFTYKDPEGDDIVFDKDSELHLALRLCPSSLEIAAALKET-PAKKPDPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLLARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVESDSAAPATEESGGADHTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLLLALDVRPLRLVKLGYVDGKYLRRMLNNEKQ 966 MTT +IKINFQGASRDV++P+P +LA LQ AIA+ F ELP RS A EAAKD DLSFTYKDP+GDDIVFDKDSEL LA+RLCPSSLEI+A LKE+ PAKKPDPE RLY++AARNLREYNGVPSMT KLIKTLAFLKLNP+RLVKQGLAPKVLLARM A+A N ++ PLG D NEDLAESVAA G+ LMSVEDDKKEWNDGFVS ESD++A A + T+ D + AAP E KKD +H+AFI GGIQLRPRE RPLL+ALDVRP RL KLG VDGK LR ML EK+ Sbjct: 19 MTTPSIKINFQGASRDVNVPAPVSLASLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESEPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKV-PLG-DGKNNEDLAESVAA-GMELMSVEDDKKEWNDGFVSAESDASAAAVPITA---KTSTPDNDNEEENNDAAP-ETKKDLIHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLRAEKK 314
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI) HSP 1 Score: 354 bits (908), Expect = 1.020e-114 Identity = 210/303 (69.31%), Postives = 233/303 (76.90%), Query Frame = 1 Query: 61 MTTRTIKINFQGASRDVDLPSPFTLAGLQQAIASTFGTELPARSGADEAAKDGDLSFTYKDPEGDDIVFDKDSELHLALRLCPSSLEIAAALKET-PAKKPDPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLLARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVESDSAAPATEESGGADHTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLLLALDVRPLRLVKLGYVDGKYLRRMLNNEKQ 966 MTT +IKINFQG SRDV++P P TLA LQ AIA F ELP RS A EAAKD DLSFTYKDP+GDDIVFDKDSEL+LA+RLCP SLEI+AA KE PA KPDPE RLY++AARNLREYNGVPSMTP KL+KTLAFL+LNP+RLVKQGLAPKVLLARM A+A N ++ PLG D NEDLAESVAA G+ LMSVEDDKKEWNDGFVSVE PA S G D + A AP E KK+ +H+AFIAGGIQLRPRE RPLL+ALDVRP RL KLG V+GK LR ML EK+ Sbjct: 1 MTTSSIKINFQGTSRDVNVPVPVTLASLQAAIAGAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANNAKVSKV-PLG-DGKNNEDLAESVAA-GMELMSVEDDKKEWNDGFVSVE-----PADTSSPG--------NDNEEKNDAVAP-EVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAEKK 286
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI) HSP 1 Score: 342 bits (877), Expect = 6.680e-111 Identity = 204/303 (67.33%), Postives = 230/303 (75.91%), Query Frame = 1 Query: 61 MTTRTIKINFQGASRDVDLPSPFTLAGLQQAIASTFGTELPARSGADEAAKDGDLSFTYKDPEGDDIVFDKDSELHLALRLCPSSLEIAAALKETPAKK-PDPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLLARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVESDSAAPATEESGGADHTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLLLALDVRPLRLVKLGYVDGKYLRRMLNNEKQ 966 MTT +IKINFQGASRDV++P+P TLA LQ IA+ F ELP RS EAAKD DLSFTYKDP+GDDIVFDKDSEL LA+RLCP SLEI+AA KE A + PD E RLY++AARNLREYNGVPSMTP KL+KTLAFLKLNP+RLVKQGLAPK LL RM A+A N ++ PLG D NEDLAESVAA G+ LMS+EDDKKEWNDGFVSVE PA T++ D + A AP E KK+ +H+AFIAGGIQLRPRE RPLL+ALDVRP RL KLG VDGK LR ML EK+ Sbjct: 17 MTTSSIKINFQGASRDVNVPAPVTLASLQAVIAAAFDAELPVRSPGGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEKKAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANNAKVSKV-PLG-DGKNNEDLAESVAA-GMELMSLEDDKKEWNDGFVSVE-----PAD--------TSSPDNDNEEKNDAVAP-EVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKK 302
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE) HSP 1 Score: 335 bits (860), Expect = 2.750e-108 Identity = 201/303 (66.34%), Postives = 228/303 (75.25%), Query Frame = 1 Query: 61 MTTRTIKINFQGASRDVDLPSPFTLAGLQQAIASTFGTELPARSGADEAAKDGDLSFTYKDPEGDDIVFDKDSELHLALRLCPSSLEIAAALKETPAKK-PDPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLLARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVESDSAAPATEESGGADHTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLLLALDVRPLRLVKLGYVDGKYLRRMLNNEKQ 966 MTT +IKINFQGASRDV +P+P TLA LQ AIA+ F ELP RS EAAKD DLSFTYKDP+GDDIVFDKDSEL+LALRLCP SLEI+AA KE A K PD E LY++AARNLREYNGVPSMTP KL+KTLAFLKLNP+RLVKQGLAPK+LLARM A+ N ++ + GD NEDLAE VAA G+ MSVEDDKKEWNDGFVSVE PA T+++ + AAP E K++ +H+AFIAGGIQLRPRE RPLL+ALDVRP RL KLG VDGK LR ML EK+ Sbjct: 28 MTTSSIKINFQGASRDVSVPAPATLARLQAAIAAVFEVELPVRSLTGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKENKATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANNAKLSKVRL--GDGKNNEDLAEWVAA-GMEFMSVEDDKKEWNDGFVSVE-----PA--------ETSSSDNGNEEENDDAAP-EVKQNLIHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDLRAMLQAEKK 313
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE) HSP 1 Score: 337 bits (863), Expect = 1.890e-107 Identity = 201/301 (66.78%), Postives = 229/301 (76.08%), Query Frame = 1 Query: 61 MTTRTIKINFQGASRDVDLPSPFTLAGLQQAIASTFGTELPARSGADEAAKDGDLSFTYKDPEGDDIVFDKDSELHLALRLCPSSLEIAAALKET-PAKKPDPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLLARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVESDSAAPATEESGGADHTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLLLALDVRPLRLVKLGYVDGKYLRRMLNNE 960 MTT +IKINFQG SR+V++ +PFTLA LQ IA+ F ELP RS A EA KD DLSFTYKDP+GDDIVFDKDSEL+LA+RLCP SLEI+AA KE P KPDPE RLY++AARNLREYNGVPSMT KLIKTLAFLKLNPRRLVKQGLAPK LLARM A+A N ++ GD NEDLAESVAA G+ LMSVEDDKKE N+GFVS + D++A A + T++ D + AAP E KK+ +H AFIAGGIQLRPRE RPLL+ALDVRP RL KLG V+GKYLR ML E Sbjct: 1 MTTSSIKINFQGTSRNVNVQAPFTLASLQATIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGKENKPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAEAANNMKVSKVTL--GDGENNEDLAESVAA-GMELMSVEDDKKECNNGFVSAKPDASAAAVPITA---KTSSPDNDNEEENDDAAP-EVKKNLIHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYLRAMLQAE 294
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE) HSP 1 Score: 330 bits (846), Expect = 3.750e-106 Identity = 201/304 (66.12%), Postives = 227/304 (74.67%), Query Frame = 1 Query: 61 MTTRTIKINFQGASRDVDLPSPFTLAGLQQAIASTFGTELPARSGADEAAKDGDLSFTYKDPEGDDIVFDKDSELHLALRLCPSSLEIAAALKETPAKK-PDPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLLARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVE-SDSAAPATEESGGADHTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLLLALDVRPLRLVKLGYVDGKYLRRMLNNEKQ 966 MTT +IKI FQGASRDV++ P LA LQ AIA+ F ELPARS A EAA D DLSFTYKDP+GDDIVFDK+SEL LALRLCP SLEI+AA KE A + PD E +LY++AARNLREYNGVPSMTP KL+KTLAFLKLNP+RLVKQGLAPKVLLARM A+A N ++ PLG D NEDLAESVAA G+ LMSVED KKEWNDGFVSVE ++ + PA + D AAP E KK+ +H+AFIAGGIQLRPRE RPLL+ALDV P RL KLG V GK LR ML EK+ Sbjct: 19 MTTSSIKITFQGASRDVNVRVPVMLASLQAAIAAAFDVELPARSSAGEAANDTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKENKATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKV-PLG-DGKNNEDLAESVAA-GMELMSVEDGKKEWNDGFVSVEPAEISFPANDNEEKND---------------AAP-EAKKNLIHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDLRAMLRAEKK 303
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI) HSP 1 Score: 318 bits (815), Expect = 3.020e-103 Identity = 194/281 (69.04%), Postives = 219/281 (77.94%), Query Frame = 1 Query: 61 MTTRTIKINFQGASRDVDLPSPFTLAGLQQAIASTFGTELPARSGADEAAKDGDLSFTYKDPEGDDIVFDKDSELHLALRLCPSSLEIAAALKET-PAKKPDPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLLARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVESDS---AAPATEESGGADHTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLLLALDV 891 MTT +IKINFQGASRDV++P+P TL LQ AIA+ F ELP RS A EAAKD DLSFTYKDP+GDDIVFDKDSEL LA+RLCPSSLEI+AALKE+ PA KPDPE RLY++AARNLREYNGVPSMTP KLIKTLAFLKLNP+RLVKQGLAPKVLLARM A+A N ++ PLG D NEDLA+SVAA G+ LMSVED KKEWNDGFVS ESD+ AAP T E+ D+ D AAP E KK+ +H+AFIAGGIQLRPRE LLL + + Sbjct: 16 MTTSSIKINFQGASRDVNVPAPVTLDSLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALKESKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKV-PLG-DGKNNEDLADSVAA-GMELMSVED-KKEWNDGFVSAESDAPAAAAPITAETSSPDNDKEEENDD------AAP-EVKKNLIHKAFIAGGIQLRPREG--LLLGVSI 283
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 4.260e-10 Identity = 59/177 (33.33%), Postives = 83/177 (46.89%), Query Frame = 1 Query: 361 DPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLL-----ARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVESDSAAPATEESGGADHTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLL 876 +P +++ AARNLREY+GVPS+TP L T+ L+L P RLV QGLAPK+LL A + AD+ +G + + + + DL+ + + G ND V T+ S G + A K + F+A G+QLRPRE RPLL Sbjct: 36 EPNPLMFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLKGNSTAGVDADSTDGSGGFEAEEEQANNQFSHDLSSNSSDGG----------DTGNDNIV----------TQNSIGFE------------------ARASKHPIQAVFVAVGVQLRPRETRPLL 174
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: A0A6H5K3J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J2_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 4.550e-9 Identity = 62/174 (35.63%), Postives = 81/174 (46.55%), Query Frame = 1 Query: 361 DPERRLYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVLLARMAADAKKNTGPAQTQPLGGDQSGNEDLAESVAAAGVGLMSVEDDKKEWNDGFVSVESDSAAPATEESGGAD--HTAAAAKDGKHGTAAAAPAEKKKDALHEAFIAGGIQLRPREARPLL 876 +P LY+ AARNL EY+GVPSMT L KT+ L+L P RLV QGLAPK LL +A +G+ E D ++ ++ VS +S+ T G D H A +D A+ K +H F+A G+QLRPRE RPLL Sbjct: 46 EPNPLLYKAAARNLCEYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLEGKSA------------------AGDAXXXXXXXXXXXXXXXXEVDPEQADNNQVSDDSN-----TNSRDGTDIEHDHVATQDSIDIETGAS-----KHPIHAVFVAAGVQLRPRETRPLL 191
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Match: A0A6H5KI70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI70_9PHAE) HSP 1 Score: 61.2 bits (147), Expect = 1.890e-7 Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 1 Query: 376 LYQLAARNLREYNGVPSMTPAKLIKTLAFLKLNPRRLVKQGLAPKVL 516 LY+ AARNLREY+GVPSMT L KT+ L+L P RLV QGLAPK + Sbjct: 53 LYKAAARNLREYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKXI 99 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18644.5452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18644.5452.1 >prot_L-elsbetiae_contig18644.5452.1 ID=prot_L-elsbetiae_contig18644.5452.1|Name=mRNA_L-elsbetiae_contig18644.5452.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=435bp MNTTNSNTTHNNNNTNNNTKMTTRTIKINFQGASRDVDLPSPFTLAGLQQback to top mRNA from alignment at L-elsbetiae_contig18644:255..2374+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18644.5452.1 ID=mRNA_L-elsbetiae_contig18644.5452.1|Name=mRNA_L-elsbetiae_contig18644.5452.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2120bp|location=Sequence derived from alignment at L-elsbetiae_contig18644:255..2374+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18644:255..2374+ >mRNA_L-elsbetiae_contig18644.5452.1 ID=mRNA_L-elsbetiae_contig18644.5452.1|Name=mRNA_L-elsbetiae_contig18644.5452.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2610bp|location=Sequence derived from alignment at L-elsbetiae_contig18644:255..2374+ (Laminarionema elsbetiae ELsaHSoW15)back to top |