mRNA_L-elsbetiae_contig1863.5448.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1863.5448.1 vs. uniprot
Match: D7FQQ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQQ8_ECTSI) HSP 1 Score: 313 bits (803), Expect = 1.880e-100 Identity = 163/227 (71.81%), Postives = 183/227 (80.62%), Query Frame = 1 Query: 1 GCHAEAFAKVLPA-WTFQPTEAIQYDETRIPDILATIEEGQNSNIRPPLVLDMCSDPSTWPRPAAEEKAGEGGAAGLWDAVMCSNMIHISPQECTGGLLKGASAGLKAGGYLIIYGPFALNGLLVPDSNKGFDESLKARSGGSWGIRDVAWVASLADEQGLELKAMTLMPANNFFVVFTKVNPAPGSSADDTIPARDGAAREARVADLVSAVVMPAREALEASLAAK 678 GCH EAFA LPA WT+QPTE YD+TRIPDILATIEEG++SNIRPP+VLD+CSDPSTWPRPA E A EG + WDA++CSNMIHISPQECTGGLL GA+AGLK GG+L IYGPFALNGLL+PDSNK FD SLKARSGGSWGIRD AWV LA +QGLEL AMTLMPANNFFVVF KV ++A D R+ARVA+LV+AVVMPAREAL ++AK Sbjct: 49 GCHVEAFAGHLPAFWTYQPTE---YDQTRIPDILATIEEGKHSNIRPPVVLDVCSDPSTWPRPAGGETA-EGASRRQWDAIVCSNMIHISPQECTGGLLGGAAAGLKVGGHLFIYGPFALNGLLIPDSNKNFDTSLKARSGGSWGIRDAAWVCGLAHDQGLELTAMTLMPANNFFVVFKKVREVAAAAAADVED------RKARVAELVAAVVMPAREALVTKVSAK 265
BLAST of mRNA_L-elsbetiae_contig1863.5448.1 vs. uniprot
Match: A0A7V8BKX2_9BURK (DUF938 domain-containing protein n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A7V8BKX2_9BURK) HSP 1 Score: 131 bits (330), Expect = 8.200e-32 Identity = 80/181 (44.20%), Postives = 101/181 (55.80%), Query Frame = 1 Query: 1 GCHAEAFAKVLPAWTFQPTEAIQYDETRIPDILATIEEGQNSNIRPPLVLDMCSDPSTWPRPAAEEKAGEGGAAGLWDAVMCSNMIHISPQECTGGLLKGASAGLKAGGYLIIYGPFALNGLLVPDSNKGFDESLKARSGGSWGIRDVAWVASLADEQGLELKAMTLMPANNFFVVFTKVN 543 G H FA+ LPA TFQP+E D R I A G+ SN+ PPL D+ P WP AA DA++C N+IHISP E T L+ GA A L AGG L+ YGP+ G SN+ FD SL+AR+ WG+RDV VA +A +GL L+ + MPANNF +V+ K N Sbjct: 39 GQHVAHFAQALPALTFQPSEM---DVERHASIAAWAAAGKLSNVEPPLAFDVTKSP--WPVSAA-------------DAIVCINVIHISPWEATLALMAGAGAILSAGGVLVTYGPYKRGGAHTSQSNQAFDASLRARNP-LWGVRDVDTVAQVAGSEGLALEEIVPMPANNFTLVWRKSN 200
BLAST of mRNA_L-elsbetiae_contig1863.5448.1 vs. uniprot
Match: A0A2P8K906_9BURK (DUF938 domain-containing protein n=5 Tax=unclassified Variovorax TaxID=663243 RepID=A0A2P8K906_9BURK) HSP 1 Score: 131 bits (330), Expect = 1.140e-31 Identity = 83/189 (43.92%), Postives = 106/189 (56.08%), Query Frame = 1 Query: 1 GCHAEAFAKVLPAWTFQPTEAIQYDETRIPDILATIEEGQNSNIRPPLVLDMCSDPSTWPRPAAEEKAGEGGAAGLWDAVMCSNMIHISPQECTGGLLKGASAGLKAGGYLIIYGPFALNGLLVPDSNKGFDESLKARSGGSWGIRDVAWVASLADEQGLELKAMTLMPANNFFVVFTKVNPA-PGSSA 564 G H FA+ LPA TFQP+E D R I A + EG SN++PPL +D+ P WP AA DAV+C N+IHISP E T L+ GA L A G L+ YGP+ G SN+ FD SL+AR+ WG+RD+ VA +A +GL L+ MPANNF +V+ K N A PG+ A Sbjct: 39 GQHVVHFARALPALTFQPSEM---DVERHASIEAWVAEGNLSNVKPPLAIDVTKHP--WPVSAA-------------DAVVCINVIHISPWEATLALMAGAGRILPASGVLVTYGPYMRGGAHTSQSNEAFDASLRARNP-LWGVRDIDKVAEVAGNEGLALEEAVPMPANNFTLVWRKSNGALPGARA 208
BLAST of mRNA_L-elsbetiae_contig1863.5448.1 vs. uniprot
Match: A0A5F8H9S4_MONDO (Uncharacterized protein n=2 Tax=Didelphinae TaxID=126287 RepID=A0A5F8H9S4_MONDO) HSP 1 Score: 130 bits (328), Expect = 1.560e-31 Identity = 83/180 (46.11%), Postives = 103/180 (57.22%), Query Frame = 1 Query: 1 GCHAEAFAKVLPAWTFQPTEAIQYDETRIPDILATIEEGQNSNIRPPLVLDM-CSDPSTWPRPAAEEKAGEGGAAGLWDAVMCSNMIHISPQECTGGLLKGASAGLKAGGYLIIYGPFALNGLLVPDSNKGFDESLKARSGGSWGIRDVAWVASLADEQGLELKAMTLMPANNFFVVFTK 537 G H FAK P +QPTE D + I A I++ Q N+RPPL LD CS W EK G G AG D V+C NMIHISP CT GL +GA LK G LI YG +A+NG + P+SN FD SL+ R+ +WG+RDV+ + LA GL L+ M MPANN ++F K Sbjct: 37 GQHVTYFAKAFPKVVWQPTEV---DRQCLNSISALIKKEQLQNVRPPLFLDASCS----W------EKWG-GIQAGSVDLVLCVNMIHISPMNCTEGLFRGAGQLLKPSGLLITYGAYAINGKITPESNVNFDISLRYRNP-AWGLRDVSLLQQLAQASGLFLEKMIDMPANNKCLIFRK 201
BLAST of mRNA_L-elsbetiae_contig1863.5448.1 vs. uniprot
Match: A0A6P2EE17_9BURK (Methyltransferase domain protein n=1 Tax=Variovorax sp. PBS-H4 TaxID=434008 RepID=A0A6P2EE17_9BURK) HSP 1 Score: 130 bits (327), Expect = 1.930e-31 Identity = 79/179 (44.13%), Postives = 101/179 (56.42%), Query Frame = 1 Query: 1 GCHAEAFAKVLPAWTFQPTEAIQYDETRIPDILATIEEGQNSNIRPPLVLDMCSDPSTWPRPAAEEKAGEGGAAGLWDAVMCSNMIHISPQECTGGLLKGASAGLKAGGYLIIYGPFALNGLLVPDSNKGFDESLKARSGGSWGIRDVAWVASLADEQGLELKAMTLMPANNFFVVFTK 537 G H FAK LPA TFQP+E D R I+A G SN++PPL +D+ P WP AA DAV+C N+IHISP E T L+ GA L AGG L+ YGP+ +G SN+ FD SL+AR+ WG+RD+ VA +A +QG L+ MPANNF +V+ K Sbjct: 39 GQHVAHFAKALPALTFQPSEM---DVERHASIVAWAAAGNLSNVKPPLAIDVMKRP--WPVSAA-------------DAVVCINVIHISPWEATLALMAGADRILPAGGLLVTYGPYMRDGAHTSQSNEAFDASLRARNP-RWGVRDLDRVAEVAGDQGFALEEAVAMPANNFTLVWRK 198
BLAST of mRNA_L-elsbetiae_contig1863.5448.1 vs. uniprot
Match: U585_DROME (UPF0585 protein CG18661 n=16 Tax=melanogaster group TaxID=32346 RepID=U585_DROME) HSP 1 Score: 129 bits (325), Expect = 7.070e-31 Identity = 74/180 (41.11%), Postives = 100/180 (55.56%), Query Frame = 1 Query: 1 GCHAEAFAKVLPAWTFQPTEAIQYDETRIPDILATIEEGQNSNIRPPLVLDMCSDPSTWPRPAAEEKAGEGGAAGLWDAVMCSNMIHISPQECTGGLLKGASAGLKAGGYLIIYGPFALNGLLVPDSNKGFDESLKARSGGSWGIRDVAWVASLADEQGLELKAMTLMPANNFFVVFTKV 540 G HA A +LP TFQPTE Y+ + I A + NIRPP +D+ DP W P A +D + SNM+HISP C+ GL + A LK GG + YGP+A +G+LVP SN FD SL+ R SWG+RD+ + LA E GL+L+ + MP+NN F+ + K+ Sbjct: 56 GQHAGFLAPLLPNITFQPTE---YERNQFGSIAAYAGDCPTRNIRPPFHVDITRDPGDWEAPPAPAS---------YDYMFNSNMMHISPWSCSIGLFRAAGQLLKKGGRMFTYGPYAQDGILVPQSNVDFDRSLRQRDA-SWGVRDIKDLKVLAAENGLQLEKLVKMPSNNKFLTWLKL 222
BLAST of mRNA_L-elsbetiae_contig1863.5448.1 vs. uniprot
Match: A0A6P4JGI7_DROKI (UPF0585 protein CG18661 isoform X1 n=5 Tax=montium subgroup TaxID=32352 RepID=A0A6P4JGI7_DROKI) HSP 1 Score: 129 bits (324), Expect = 1.030e-30 Identity = 73/180 (40.56%), Postives = 103/180 (57.22%), Query Frame = 1 Query: 1 GCHAEAFAKVLPAWTFQPTEAIQYDETRIPDILATIEEGQNSNIRPPLVLDMCSDPSTWPRPAAEEKAGEGGAAGLWDAVMCSNMIHISPQECTGGLLKGASAGLKAGGYLIIYGPFALNGLLVPDSNKGFDESLKARSGGSWGIRDVAWVASLADEQGLELKAMTLMPANNFFVVFTKV 540 G HA A +LP TFQPTE Y+ ++ I A ++ NIR P +D+ DP W P G +D + SNM+HISP C+ GL + A LK GG + YGP+A +G+LVP SN FD SL++R SWG+RD+ + ++A E GLEL+ + MP+NN F+ + K+ Sbjct: 58 GQHAGFLAPLLPNITFQPTE---YERQQLDSIAAYAKDCPTGNIRAPFCVDITQDPRDWEVPPTP---------GSFDYMFNSNMMHISPWSCSLGLFRAAGQLLKKGGRMFTYGPYAQDGVLVPQSNVDFDRSLRSRDA-SWGVRDIKDLKAVALENGLELEKLVEMPSNNKFLTWLKL 224
BLAST of mRNA_L-elsbetiae_contig1863.5448.1 vs. uniprot
Match: A0A6P4EFS1_DRORH (UPF0585 protein CG18661 isoform X2 n=1 Tax=Drosophila rhopaloa TaxID=1041015 RepID=A0A6P4EFS1_DRORH) HSP 1 Score: 127 bits (320), Expect = 2.480e-30 Identity = 75/180 (41.67%), Postives = 100/180 (55.56%), Query Frame = 1 Query: 1 GCHAEAFAKVLPAWTFQPTEAIQYDETRIPDILATIEEGQNSNIRPPLVLDMCSDPSTWPRPAAEEKAGEGGAAGLWDAVMCSNMIHISPQECTGGLLKGASAGLKAGGYLIIYGPFALNGLLVPDSNKGFDESLKARSGGSWGIRDVAWVASLADEQGLELKAMTLMPANNFFVVFTKV 540 G HA A +LP TF PTE Y+ + I A EE NIR PL +D+ DP W P A +D + SNM+HISP C+ GL + A LK GG + YGP+A +GLLVP SN FD SL+ R SWG+RD+ + LA + GL+L+ + MP+NN F+ + K+ Sbjct: 43 GQHAGFLAPLLPNITFHPTE---YERGQFGSISAYAEECATGNIRAPLHVDVTRDPRDWESPPAPAS---------YDYMFNSNMMHISPWACSIGLFRAAGQLLKKGGRMFTYGPYAQDGLLVPQSNVDFDRSLRQRDA-SWGVRDIKDLKVLAADNGLQLEKLVEMPSNNKFLTWLKL 209
BLAST of mRNA_L-elsbetiae_contig1863.5448.1 vs. uniprot
Match: A0A6P2DUW1_9BURK (Methyltransferase domain protein n=1 Tax=Variovorax sp. RA8 TaxID=662548 RepID=A0A6P2DUW1_9BURK) HSP 1 Score: 127 bits (318), Expect = 4.710e-30 Identity = 80/187 (42.78%), Postives = 105/187 (56.15%), Query Frame = 1 Query: 1 GCHAEAFAKVLPAWTFQPTEAIQYDETRIPDILATIEEGQNSNIRPPLVLDMCSDPSTWPRPAAEEKAGEGGAAGLWDAVMCSNMIHISPQECTGGLLKGASAGLKAGGYLIIYGPFALNGLLVPDSNKGFDESLKARSGGSWGIRDVAWVASLADEQGLELKAMTLMPANNFFVVFTKVNPA-PGS 558 G H FA+ LPA TFQP+E D R I A + EG SN++P L +D+ P WP AA DAV+C N+IHISP E T L+ GA L AGG L+ YGP+ G SN+ FD SL+A + WG+RD+ VA +A +GL L+ + MPANNF +V+ + N A PG+ Sbjct: 39 GQHVAHFARALPALTFQPSEM---DVERHASIEAWVAEGNLSNVKPTLAIDVTKHP--WPVSAA-------------DAVVCINVIHISPWEATLALMAGAGRILPAGGVLVTYGPYMRGGAHTSQSNEAFDASLRATNP-LWGVRDIDKVAEVAANEGLALEEVVPMPANNFTLVWRRPNGALPGA 206
BLAST of mRNA_L-elsbetiae_contig1863.5448.1 vs. uniprot
Match: A0A2P2I4J3_9CRUS (UPF0585 protein C16orf13 homolog (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2I4J3_9CRUS) HSP 1 Score: 127 bits (318), Expect = 6.670e-30 Identity = 72/179 (40.22%), Postives = 101/179 (56.42%), Query Frame = 1 Query: 1 GCHAEAFAKVLPAWTFQPTEAIQYDETRIPDILATIEEGQNSNIRPPLVLDMCSDPSTWPRPAAEEKAGEGGAAGLWDAVMCSNMIHISPQECTGGLLKGASAGLKAGGYLIIYGPFALNGLLVPDSNKGFDESLKARSGGSWGIRDVAWVASLADEQGLELKAMTLMPANNFFVVFTK 537 G HA +A LP+ ++QP+E YD + + I A + + Q N+ PL++D+CSDPSTWP+ +K D ++ NMIHI+P C+ L + A L+ G L+ YGP+A +G++ P SN FD SLKAR SWG+RD + S A GL MPANN +VF K Sbjct: 55 GQHAAHWAAALPSVSYQPSE---YDPSSLASISAYVADAQLPNLLEPLLIDICSDPSTWPKGPLSDKP--------LDVLLNVNMIHITPWHCSQSLFRAAGQLLRPAGLLVTYGPYACDGVITPASNVNFDLSLKARDP-SWGLRDTRALDSEAKNNGLNFICKYDMPANNKTLVFVK 221 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1863.5448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1863.5448.1 >prot_L-elsbetiae_contig1863.5448.1 ID=prot_L-elsbetiae_contig1863.5448.1|Name=mRNA_L-elsbetiae_contig1863.5448.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=176bp MCSDPSTWPRPAAEEKAGEGGAAGLWDAVMCSNMIHISPQECTGGLLKGAback to top mRNA from alignment at L-elsbetiae_contig1863:18980..22824- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1863.5448.1 ID=mRNA_L-elsbetiae_contig1863.5448.1|Name=mRNA_L-elsbetiae_contig1863.5448.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3845bp|location=Sequence derived from alignment at L-elsbetiae_contig1863:18980..22824- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1863:18980..22824- >mRNA_L-elsbetiae_contig1863.5448.1 ID=mRNA_L-elsbetiae_contig1863.5448.1|Name=mRNA_L-elsbetiae_contig1863.5448.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1056bp|location=Sequence derived from alignment at L-elsbetiae_contig1863:18980..22824- (Laminarionema elsbetiae ELsaHSoW15)back to top |