prot_L-elsbetiae_contig1863.5447.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1863.5447.1
Unique Nameprot_L-elsbetiae_contig1863.5447.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length327
Homology
BLAST of mRNA_L-elsbetiae_contig1863.5447.1 vs. uniprot
Match: D7FQQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQQ7_ECTSI)

HSP 1 Score: 483 bits (1242), Expect = 6.410e-169
Identity = 264/336 (78.57%), Postives = 289/336 (86.01%), Query Frame = 0
Query:    1 MAPAGQRFNAVMEVLVHELLQERIIRARAPSSVSIASLRDSKGRRKRVGHQQGTVALDLPRSMGTTISKSVGDIAVATGTGTLSDISAGTIPKGSTHGSSLTAGGRSGSDSFVG---------ENATEPKERCKTSPLQGKMGVSRNALGVRAEGGREASRKHHTSSAKRSHGHPSPPKGNRASNAGGMLNKFQFSKDAMRRQQMSHESWIPDDLRMKMMRRSMAVIKENVYESVAQGSLVKKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKVCAFCSQLFHDPLGYRPTWEMELQSMRKQREQLAREKEREYWDPLRK 327
            MAPAGQR  AVMEVLV EL QERI+R+RAPSSVSIASLRDSKGRR++VG++  + +L+LPRS+G  +SKSVGD+A AT TGT SDISAG+IPK S H S+L A G SGSDS  G         E A + KERCK SPLQGKMG SR  LG R EGGRE  RKHHTSSAKR HGH SP KGNRAS+AGG+LNKFQFSKDA+RRQQMSHESWIPDDLRMKM+RR MAVIKENV+ESVA GS+V+KEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKVCAFCSQLFHDPLGYRPTW+ME+  MRK+REQLAREKEREYWDPLRK
Sbjct:    1 MAPAGQRLTAVMEVLVRELAQERIVRSRAPSSVSIASLRDSKGRRRQVGNRHMSTSLELPRSLGANLSKSVGDVA-ATDTGTFSDISAGSIPKTSGHQSALKAEGGSGSDSPPGGRGGGSTMTEAAGDSKERCKMSPLQGKMGASRKNLGARTEGGREVPRKHHTSSAKRGHGHSSPLKGNRASSAGGVLNKFQFSKDAIRRQQMSHESWIPDDLRMKMVRRGMAVIKENVFESVAHGSVVRKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKVCAFCSQLFHDPLGYRPTWDMEVSRMRKKREQLAREKEREYWDPLRK 335          
BLAST of mRNA_L-elsbetiae_contig1863.5447.1 vs. uniprot
Match: A0A836CGB7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB7_9STRA)

HSP 1 Score: 122 bits (307), Expect = 6.750e-28
Identity = 71/173 (41.04%), Postives = 99/173 (57.23%), Query Frame = 0
Query:  191 MRRQQMSHESWIPDDLRMKMMRRSMAVIKENVYESVAQGSLVKKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFK-------------------------------------VCAFCSQLFHDPLGYRPTWEMELQSMRKQREQLAREKEREYWDPLR 326
            +R+ Q+S ESWIP DLRMKM+RRS++ + ++V E+ A   +  K+  +++R+ LEI K QE+FG +  RPCALCEQ FS VNLVLAVP+K                                     VCAFCSQ F +P  YRPT EM+  +++    +   ++E+ YWDPLR
Sbjct:  237 VRKPQLSQESWIPIDLRMKMLRRSISAVADSVSETAAWEKVRTKQAAKNARTSLEIAKEQERFGRECPRPCALCEQVFSSVNLVLAVPYKAIMDVREHWHEKAPHRLGPPKASHNMKRPPQCYNEVRVCAFCSQQFSEPATYRPTQEMKAAALKDAEAKEEADREKAYWDPLR 409          
BLAST of mRNA_L-elsbetiae_contig1863.5447.1 vs. uniprot
Match: A0A7S2LA26_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LA26_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.160e-6
Identity = 44/146 (30.14%), Postives = 65/146 (44.52%), Query Frame = 0
Query:  197 SHESWIPDDLRMKMMRRSMAVIKENVYESVAQGSLVKKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFK--------------------------------------VCAFCSQLFHDPLG-YRPTWEMEL 303
            S ESWIP+DLR +M++R  +V K N        S   +E +R     LE  +++EK+G + +R C LC++     NLVLAV  K                                      VC FC+QLF +    YRP+W+ ++
Sbjct:  254 SRESWIPEDLRRRMLKREFSVAKMNYETREKCQSSNLRELQRCKSDALEKSRSKEKYGIEIKRNCGLCDRPHLSENLVLAVTLKACLDIRDSWGCKYDPEGSSRVRVNPNLRKAPACYNETRVCVFCAQLFDNQQEKYRPSWQAKV 399          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1863.5447.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQQ7_ECTSI6.410e-16978.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CGB7_9STRA6.750e-2841.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2LA26_9STRA1.160e-630.14Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 296..316

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1863contigL-elsbetiae_contig1863:14727..18149 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1863.5447.1mRNA_L-elsbetiae_contig1863.5447.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1863 14727..18149 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1863.5447.1 ID=prot_L-elsbetiae_contig1863.5447.1|Name=mRNA_L-elsbetiae_contig1863.5447.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=327bp
MAPAGQRFNAVMEVLVHELLQERIIRARAPSSVSIASLRDSKGRRKRVGH
QQGTVALDLPRSMGTTISKSVGDIAVATGTGTLSDISAGTIPKGSTHGSS
LTAGGRSGSDSFVGENATEPKERCKTSPLQGKMGVSRNALGVRAEGGREA
SRKHHTSSAKRSHGHPSPPKGNRASNAGGMLNKFQFSKDAMRRQQMSHES
WIPDDLRMKMMRRSMAVIKENVYESVAQGSLVKKEKKRSSRSELEIVKTQ
EKFGTKHQRPCALCEQSFSEVNLVLAVPFKVCAFCSQLFHDPLGYRPTWE
MELQSMRKQREQLAREKEREYWDPLRK
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