mRNA_L-elsbetiae_contig1860.5438.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1860.5438.1 vs. uniprot
Match: A0A7S3XZ48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ48_HETAK) HSP 1 Score: 170 bits (430), Expect = 4.510e-48 Identity = 76/107 (71.03%), Postives = 91/107 (85.05%), Query Frame = 2 Query: 530 VEDVFSYARHNRVDDLERMMDQGVPADVRDTFGNTILIVACQNGHKRALKAALRRGADPNAANARGNTALHFCYAFGYGGTLGRYLMEKGADSSIRNRSGLVCYDGI 850 +EDVFSYARHNRVDDLER++D G+P ++RD +GNT+L VACQNGHKRA KAALRRGAD NA N RGNT LHFC+ +GYG TLG+YL+ KGAD +IRN G+ CY+GI Sbjct: 16 LEDVFSYARHNRVDDLERLLDAGMPVNIRDQYGNTVLCVACQNGHKRAAKAALRRGADINARNYRGNTPLHFCFTYGYGETLGQYLISKGADPTIRNNDGVTCYEGI 122
BLAST of mRNA_L-elsbetiae_contig1860.5438.1 vs. uniprot
Match: A0A7S2MBB0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MBB0_9STRA) HSP 1 Score: 163 bits (412), Expect = 4.850e-44 Identity = 71/108 (65.74%), Postives = 91/108 (84.26%), Query Frame = 2 Query: 530 VEDVFSYARHNRVDDLERMMDQGVPADVRDTFGNTILIVACQNGHKRALKAALRRGADPNAANARGNTALHFCYAFGYGGTLGRYLMEKGADSSIRNRSGLVCYDGIG 853 VED+FSYARHNR +D+ER++DQG+P ++RD GNTIL ++CQNG+KR KAALRRGA+ NA N RGNT LHFCY +GYG TLG+YL+ KG D+SI NR+GL C++G+G Sbjct: 120 VEDIFSYARHNRFEDIERLLDQGIPVNIRDKTGNTILAISCQNGNKRVAKAALRRGANINAQNYRGNTPLHFCYTYGYGDTLGQYLISKGGDTSILNRAGLTCFEGLG 227
BLAST of mRNA_L-elsbetiae_contig1860.5438.1 vs. uniprot
Match: D8LT35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT35_ECTSI) HSP 1 Score: 163 bits (412), Expect = 9.390e-44 Identity = 105/224 (46.88%), Postives = 131/224 (58.48%), Query Frame = 2 Query: 188 QDGDIGSRRGAPAYGIPSHRC-----------SLHGIQ--NQDRHREVSGPTSASSYVSSNGESYYDEPPMVTQQ---RGSSRRPSALERRAKTYSEEVGERQQ---------------AGKVVGTSQNNRGG--ESRHMAGFRQTMVEDVFSYARHNRVDDLERMMDQGVPADVRDTFGNTILIVACQNGHKRALKAALRRGADPNAANARGNTALHFCYAFG 760 +DGD+ APAY +P+++ S G+ N++ R + S G+ Y+ PP T+Q G R + R + T VG ++ G+V S+ N GG + GFRQ++VEDVFSYARHNRV DLERMMDQGVPADVRD+ GNTILIVACQNGHKRALKAALR GADP+A+NARGNTALH+CYAFG Sbjct: 26 EDGDLARPSSAPAYDLPAYQFDGRTALMFGEQSSRGVNECNREITRSLQRYDGGSRGHGRGGQPSYEGPPTGTKQDAFNGPFGREGRISRNSSTTKPLVGRSKRFDKPSWTRGEQQLPGRGQVGAASRTNVGGGDTAAPPGGFRQSIVEDVFSYARHNRVLDLERMMDQGVPADVRDSHGNTILIVACQNGHKRALKAALRHGADPDASNARGNTALHYCYAFG 249
BLAST of mRNA_L-elsbetiae_contig1860.5438.1 vs. uniprot
Match: A0A485KLK5_9STRA (Aste57867_8880 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLK5_9STRA) HSP 1 Score: 145 bits (366), Expect = 4.910e-37 Identity = 69/119 (57.98%), Postives = 87/119 (73.11%), Query Frame = 2 Query: 515 FRQTMVEDVFSYARHNRVDDLERMMDQGVPADVRDTFGNTILIVACQNGHKRALKAALRRGADPNAANARGNTALHFCYAFGYGGTLGRYLMEKGADSSIRNRSGLVCYDGIGR*NSKE 871 F + + DVFS ARHNRVDD+ M+D G+P +++D +GN++L++ACQNG KR K LRRGA+ NA N RGNT LHFCYA+GYG TLG YL+ KGAD +IRN L CY GI S+E Sbjct: 134 FAKPVKADVFSLARHNRVDDVRDMLDSGLPVNIQDAYGNSLLLIACQNGLKRLAKELLRRGANINAQNTRGNTPLHFCYAYGYGETLGAYLISKGADVTIRNGQDLECYYGIEAPPSRE 252
BLAST of mRNA_L-elsbetiae_contig1860.5438.1 vs. uniprot
Match: G4Z035_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4Z035_PHYSP) HSP 1 Score: 143 bits (361), Expect = 9.170e-37 Identity = 67/112 (59.82%), Postives = 87/112 (77.68%), Query Frame = 2 Query: 536 DVFSYARHNRVDDLERMMDQGVPADVRDTFGNTILIVACQNGHKRALKAALRRGADPNAANARGNTALHFCYAFGYGGTLGRYLMEKGADSSIRNRSGLVCYDGIGR*NSKE 871 D+FS ARHNR D + M+DQGVP + RD FGNT+L +ACQNG KR K ALRRGA+ N+ N RGNTALHFC+++GYG +LG YL+ KGAD++I N GLVCY GI + ++++ Sbjct: 103 DLFSAARHNRYDSVVYMLDQGVPVNSRDQFGNTLLSIACQNGLKRIAKLALRRGANINSQNNRGNTALHFCFSYGYGDSLGAYLISKGADTTIENDDGLVCYYGIAQNSARK 214
BLAST of mRNA_L-elsbetiae_contig1860.5438.1 vs. uniprot
Match: A0A5A8E191_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E191_CAFRO) HSP 1 Score: 146 bits (368), Expect = 9.720e-37 Identity = 70/108 (64.81%), Postives = 84/108 (77.78%), Query Frame = 2 Query: 530 VEDVFSYARHNRVDDLERMMDQGVPADVRDTFGNTILIVACQNGHKRALKAALRRGADPNAANARGNTALHFCYAFGYGGTLGRYLMEKGADSSIRNRSGLVCYDGIG 853 V+DVFS ARHNRV DL ++D+GVP D+ D GNTILIVACQNG KR K ALRRG D +A N+RGNTALHFCYA+GYG LG YL+ KGAD + RN +G + ++GIG Sbjct: 198 VKDVFSLARHNRVADLTALLDRGVPVDIADAHGNTILIVACQNGLKRVAKLALRRGCDIDARNSRGNTALHFCYAYGYGEGLGAYLVSKGADPAARNDAGFLPHEGIG 305
BLAST of mRNA_L-elsbetiae_contig1860.5438.1 vs. uniprot
Match: A0A0W8D3U4_PHYNI (Histone-lysine N-methyltransferase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D3U4_PHYNI) HSP 1 Score: 142 bits (357), Expect = 2.280e-36 Identity = 66/105 (62.86%), Postives = 81/105 (77.14%), Query Frame = 2 Query: 536 DVFSYARHNRVDDLERMMDQGVPADVRDTFGNTILIVACQNGHKRALKAALRRGADPNAANARGNTALHFCYAFGYGGTLGRYLMEKGADSSIRNRSGLVCYDGI 850 D+FS ARHN D + M+DQGVP + RD FGNT+L +ACQNG KR K ALRRGA+ N+ N RGNTALHFC+A+GYG +LG YL+ KGAD++I N G+VCY GI Sbjct: 84 DLFSAARHNHYDSVIYMLDQGVPVNSRDAFGNTLLTIACQNGLKRITKLALRRGANINSQNNRGNTALHFCFAYGYGDSLGAYLISKGADTTIENDDGMVCYYGI 188
BLAST of mRNA_L-elsbetiae_contig1860.5438.1 vs. uniprot
Match: H3GFG3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GFG3_PHYRM) HSP 1 Score: 142 bits (358), Expect = 4.230e-36 Identity = 66/112 (58.93%), Postives = 85/112 (75.89%), Query Frame = 2 Query: 536 DVFSYARHNRVDDLERMMDQGVPADVRDTFGNTILIVACQNGHKRALKAALRRGADPNAANARGNTALHFCYAFGYGGTLGRYLMEKGADSSIRNRSGLVCYDGIGR*NSKE 871 D+FS RHNR D + M+DQGVP + RD FGNT+L +ACQNG KR K ALRRGA+ N N RGNTALHFC+A+GYG +LG YL+ KGAD++I N G+VCY GI + ++++ Sbjct: 122 DLFSATRHNRFDSVTYMLDQGVPVNSRDAFGNTLLSIACQNGLKRIAKLALRRGANINCQNNRGNTALHFCFAYGYGDSLGAYLISKGADTTIENDDGVVCYYGIAQTSARK 233
BLAST of mRNA_L-elsbetiae_contig1860.5438.1 vs. uniprot
Match: A0A7S1TRF9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRF9_9STRA) HSP 1 Score: 142 bits (357), Expect = 5.900e-36 Identity = 63/91 (69.23%), Postives = 80/91 (87.91%), Query Frame = 2 Query: 530 VEDVFSYARHNRVDDLERMMDQGVPADVRDTFGNTILIVACQNGHKRALKAALRRGADPNAANARGNTALHFCYAFGYGGTLGRYLMEKGA 802 VED+FSYARHNRV+D+E ++D+GVP +VRD +GNT+LIV+CQNGHKRA K ALR+GAD NA N +GN+ALHFC+ +GYG TLG+YL+ KGA Sbjct: 143 VEDIFSYARHNRVEDMEAVLDRGVPVNVRDQYGNTLLIVSCQNGHKRAAKMALRKGADINARNYKGNSALHFCHTYGYGDTLGQYLISKGA 233
BLAST of mRNA_L-elsbetiae_contig1860.5438.1 vs. uniprot
Match: A0A2D4BHZ8_PYTIN (Proteasome subunit alpha, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BHZ8_PYTIN) HSP 1 Score: 147 bits (370), Expect = 6.730e-36 Identity = 69/105 (65.71%), Postives = 83/105 (79.05%), Query Frame = 2 Query: 536 DVFSYARHNRVDDLERMMDQGVPADVRDTFGNTILIVACQNGHKRALKAALRRGADPNAANARGNTALHFCYAFGYGGTLGRYLMEKGADSSIRNRSGLVCYDGI 850 DVFS ARHNRVD + M+DQGV + RD GNTIL +ACQNG KR K ALRRGA+ N+ N RGNTALHFC+A+GYG TLG YL+ KGAD++I N +GL+C+DGI Sbjct: 318 DVFSAARHNRVDSVAYMLDQGVSVNARDAHGNTILSIACQNGLKRMAKLALRRGANINSQNNRGNTALHFCFAYGYGDTLGEYLLSKGADATIANDAGLLCFDGI 422 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1860.5438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1860.5438.1 >prot_L-elsbetiae_contig1860.5438.1 ID=prot_L-elsbetiae_contig1860.5438.1|Name=mRNA_L-elsbetiae_contig1860.5438.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=253bp MFRCCVMLGECRTSASSLFVMKICFCTSCQDGDIGSRRGAPAYGIPSHRCback to top mRNA from alignment at L-elsbetiae_contig1860:3186..7025+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1860.5438.1 ID=mRNA_L-elsbetiae_contig1860.5438.1|Name=mRNA_L-elsbetiae_contig1860.5438.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3840bp|location=Sequence derived from alignment at L-elsbetiae_contig1860:3186..7025+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1860:3186..7025+ >mRNA_L-elsbetiae_contig1860.5438.1 ID=mRNA_L-elsbetiae_contig1860.5438.1|Name=mRNA_L-elsbetiae_contig1860.5438.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1518bp|location=Sequence derived from alignment at L-elsbetiae_contig1860:3186..7025+ (Laminarionema elsbetiae ELsaHSoW15)back to top |