mRNA_L-elsbetiae_contig1857.5424.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1857.5424.1 vs. uniprot
Match: D7FV73_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV73_ECTSI) HSP 1 Score: 310 bits (794), Expect = 2.270e-104 Identity = 155/167 (92.81%), Postives = 163/167 (97.60%), Query Frame = 1 Query: 253 DTAGPPDVIKGFGRRQKPVDSGNTALGKGFDLMEDDPGSRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKIPSDITVESLRILELVIPKIDLIIIGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPEEETMLSK 753 +TAGPP IKGFGRRQKPVD+GNTALGKGFDLMEDDP SRKK+VIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPK PSDITVESLR++ELVIPKIDLII+GVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPEEE++LSK Sbjct: 46 NTAGPPGTIKGFGRRQKPVDAGNTALGKGFDLMEDDPDSRKKVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLRMVELVIPKIDLIIVGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPEEESILSK 212
BLAST of mRNA_L-elsbetiae_contig1857.5424.1 vs. uniprot
Match: A0A1V9YKK9_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKK9_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.290e-28 Identity = 58/132 (43.94%), Postives = 90/132 (68.18%), Query Frame = 1 Query: 337 GFDLMEDDPGSRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKIPSDITVESLRILELVIPKIDLIIIGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPE 732 G D+ ++ K+ I YD GF + D V++RGS+ +P+ ++W+P +ITVESL I + P I+++++G G+R+ +LDP LV++L S GI VE +D+ NAC+TFN+LNAEDR+VAAA+L P+ Sbjct: 23 GHDMHKEMMTGTSKVSIAEYDDGGFVVND-VNMRGSIALLPSIAMMWKPNTMEEITVESLNIFTVANPPIEILVLGCGKRIARQLDPKLVEYLKSHGIVVEYLDSFNACATFNILNAEDRKVAAAILVNEPK 153
BLAST of mRNA_L-elsbetiae_contig1857.5424.1 vs. uniprot
Match: A0A7S1UI11_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UI11_9STRA) HSP 1 Score: 117 bits (292), Expect = 2.390e-28 Identity = 59/137 (43.07%), Postives = 91/137 (66.42%), Query Frame = 1 Query: 328 LGKGFDLMEDDPGSRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKIPSDITVESLRILELVIPKIDLIIIGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPEEE 738 +G+G D+M KI + G++ GF +G ++++ S++ +PNSF LW+P+ +ITVESL + L+ PKI+++IIG GER L P L+++ KGI VE M T +A +T+NVL +EDR VAAALL + P ++ Sbjct: 43 IGRGHDIMSGVNEGTMKITVDGFEDEGFIIGS-INIKSSVLLLPNSFFLWKPRTVDEITVESLLLPTLITPKIEMLIIGKGERNVEPLAPELLRYFKEKGIVVEHMSTSHALATYNVLTSEDRNVAAALLTIVPTDK 178
BLAST of mRNA_L-elsbetiae_contig1857.5424.1 vs. uniprot
Match: A0A067CV35_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CV35_SAPPC) HSP 1 Score: 114 bits (286), Expect = 2.420e-28 Identity = 56/132 (42.42%), Postives = 91/132 (68.94%), Query Frame = 1 Query: 337 GFDLMEDDPGSRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKIPSDITVESLRILELVIPKIDLIIIGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPE 732 G D+ ++ K+ I YD GF + D V++RGS+ +PN ++W+P+ +IT+ESL + + P I+++++G G+R+ +L+P LV++L S GI VE +D+ NAC+TFN+LNAEDR+VAAA+L P+ Sbjct: 25 GHDMHKEMMTGTSKVSISEYDDGGFVVND-VNMRGSVALLPNIAMMWKPRSLDEITIESLNVFTVANPPIEILVLGCGKRIAKQLEPSLVEYLKSNGIVVEYLDSFNACATFNILNAEDRKVAAAILVNEPK 155
BLAST of mRNA_L-elsbetiae_contig1857.5424.1 vs. uniprot
Match: K8Z3H4_NANGC (Nadh dehydrogenase (Fragment) n=4 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z3H4_NANGC) HSP 1 Score: 114 bits (286), Expect = 1.090e-27 Identity = 65/141 (46.10%), Postives = 92/141 (65.25%), Query Frame = 1 Query: 328 LGKGFDLM---EDDPGSRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKIPSDITVESLRILELVIPKIDLIIIGVGERMTAR-LDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPEEE 738 LGKG D++ ++ R++ + GYD GF++ D V+ RGS++ +P + LW+PK +IT ESL L +V P I+++IIG GE + R L +K LA+ G+ VE MDT +ACSTFN+LN EDRRVAAALL + E Sbjct: 68 LGKGIDVLAVGNEEEAGRERTFLLGYDGQGFEVRD-VNYRGSILALPTACFLWKPKKIEEITPESLAPLLIVKPAIEILIIGTGEEVVGRALALTTLKFLAANGVAVEHMDTTSACSTFNILNQEDRRVAAALLAVDAAAE 207
BLAST of mRNA_L-elsbetiae_contig1857.5424.1 vs. uniprot
Match: A0A485LLY5_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLY5_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.020e-26 Identity = 58/146 (39.73%), Postives = 93/146 (63.70%), Query Frame = 1 Query: 292 RRQKPVDSGNTALGKGFDLMEDDPGSRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKIPSDITVESLRILELVIPKIDLIIIGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSP 729 RRQ +G + G D+ ++ K+ I YD GF + + V++RG++ P +LW+P+ +IT ESL + + P ++++++G G+R+ LDP LV++L S GI VE +D+ NAC+TFN+LNAEDR+VAAA+L + P Sbjct: 7 RRQLTRPAGVRWINYGHDMHKEMMTGTMKVAITEYDDGGFVVNE-VNLRGAIALFPEIAMLWKPRTMDEITKESLAVFTVANPPVEILVLGCGKRIPRLLDPSLVEYLKSHGIVVEYVDSFNACATFNILNAEDRKVAAAILPVVP 151
BLAST of mRNA_L-elsbetiae_contig1857.5424.1 vs. uniprot
Match: A0A6G0XVP0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVP0_9STRA) HSP 1 Score: 108 bits (269), Expect = 7.710e-26 Identity = 56/130 (43.08%), Postives = 86/130 (66.15%), Query Frame = 1 Query: 343 DLMEDDPGSRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKIPSDITVESLRILELVIPKIDLIIIGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPE 732 ++M D P K+ I YD GF + + V++RG++ P +LW+PK +IT ESL + + P ++++++G G+R+ LDP LV +L S GI VE +D+ NAC+TFN+LNAEDR+VAAA+L P+ Sbjct: 28 EMMMDSP----KVAITEYDDGGFVVNE-VNMRGAIALFPEIAMLWKPKTMDEITKESLTVFTVANPPVEILVLGCGKRIPRLLDPSLVDYLKSHGIVVEYVDSFNACATFNILNAEDRKVAAAILPCVPD 152
BLAST of mRNA_L-elsbetiae_contig1857.5424.1 vs. uniprot
Match: A0A5D6XPN1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPN1_9STRA) HSP 1 Score: 106 bits (264), Expect = 5.150e-25 Identity = 56/136 (41.18%), Postives = 85/136 (62.50%), Query Frame = 1 Query: 325 ALGKGFDLMEDDPGSRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKIPSDITVESLRILELVIPKIDLIIIGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPE 732 A+ G DL ++ K+ + YD GF + D V++RG + P +LW+PK +IT ESL + + P I+++++G G R+ LDP + + L GI VE +D+VNAC+TFN+LNAEDR+VAAA+L P+ Sbjct: 21 AINYGHDLHKEMLNGTAKLSVTDYDEGGFVVND-VNMRGGVALYPEIAMLWKPKRFEEITKESLTVFTVANPPIEILVLGCGPRIQHHLDPEIKQFLKVNGIVVEYLDSVNACATFNILNAEDRKVAAAILPCDPD 155
BLAST of mRNA_L-elsbetiae_contig1857.5424.1 vs. uniprot
Match: K3X683_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X683_GLOUD) HSP 1 Score: 105 bits (263), Expect = 7.440e-25 Identity = 55/132 (41.67%), Postives = 83/132 (62.88%), Query Frame = 1 Query: 337 GFDLMEDDPGSRKKIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKIPSDITVESLRILELVIPKIDLIIIGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPE 732 G D+ ++ KI + YD GF + D V++RG + P +LW+PK +IT ES+ + + P I+++++G G R+ LDP + + L GI VE +D+VNAC+TFN+LNAEDR+VAAA+L PE Sbjct: 26 GHDMHKEMLNGTAKISVTDYDEGGFVVND-VNMRGGVALYPEIAMLWKPKRFEEITKESMTVFTVANPPIEILVLGCGARIQFNLDPEIKQFLKENGIVVEYLDSVNACATFNILNAEDRKVAAAILPYDPE 156
BLAST of mRNA_L-elsbetiae_contig1857.5424.1 vs. uniprot
Match: A0A3R7H579_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H579_9STRA) HSP 1 Score: 105 bits (261), Expect = 7.820e-25 Identity = 57/118 (48.31%), Postives = 77/118 (65.25%), Query Frame = 1 Query: 376 KIVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKIPSDITVESLRILELVIPKIDLIIIGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSP 729 K+ I YD GF + + V++RG + +LW+PK DIT E L + + P I+++I+G GER++ LDP L + L GI VE +DTVNAC+TFN+LNAEDRRVAAALL P Sbjct: 11 KVSITEYDEGGFVINN-VNMRGGVALFSEIAMLWKPKRMEDITSEHLAVFTVANPPIEILILGCGERISHMLDPKLKEMLKVNGIVVEYLDTVNACATFNILNAEDRRVAAALLPYDP 127 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1857.5424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1857.5424.1 >prot_L-elsbetiae_contig1857.5424.1 ID=prot_L-elsbetiae_contig1857.5424.1|Name=mRNA_L-elsbetiae_contig1857.5424.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=252bp MIPGAAVRQCARGARLLVRGRDGNAAHIRSVSAASRLASSSNNTTGWVAPback to top mRNA from alignment at L-elsbetiae_contig1857:18159..20608+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1857.5424.1 ID=mRNA_L-elsbetiae_contig1857.5424.1|Name=mRNA_L-elsbetiae_contig1857.5424.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2450bp|location=Sequence derived from alignment at L-elsbetiae_contig1857:18159..20608+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1857:18159..20608+ >mRNA_L-elsbetiae_contig1857.5424.1 ID=mRNA_L-elsbetiae_contig1857.5424.1|Name=mRNA_L-elsbetiae_contig1857.5424.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1512bp|location=Sequence derived from alignment at L-elsbetiae_contig1857:18159..20608+ (Laminarionema elsbetiae ELsaHSoW15)back to top |