prot_L-elsbetiae_contig1856.5419.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1856.5419.1
Unique Nameprot_L-elsbetiae_contig1856.5419.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length302
Homology
BLAST of mRNA_L-elsbetiae_contig1856.5419.1 vs. uniprot
Match: B5LWD1_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWD1_9PHYC)

HSP 1 Score: 218 bits (556), Expect = 4.380e-65
Identity = 119/293 (40.61%), Postives = 171/293 (58.36%), Query Frame = 0
Query:    1 MQEWGNFPVDDHRYYLHMVFRYFFKQYHDHAVAAGHVIPHPSYQYILDTISPNGCANCFPPEFRRFLVDASRRSIATVSLPVPIKGNSQDVTYGSNFEAVPHVSALRRKIESTVLDWRNNQHEVYPFYLRVGNPYNKHIIDAECRARKVGVVTEGLRKLEGVDLSKMAAVAEARPKSLTMYDEYTRHVFKTHGEQLHERMGFFMLSVYRHVFFALQEFNVLEELFVATGAGMEVFVSFQSFCTQSTKSPGFERDESLCRALLMVIVDICFFFYVFDNRVLKEEDPVEIVDKVV 293
            +  WGN  + D RYYLHMVFR++ K+YHD A   G V+ HPSYQ+ILD+I P+  A+ FPPEFRRFL D   RS     +P+P+K ++ +VTY  NFE    +S  R  I+  +  W + +  VYP YLR G+  +  I++    ARKV  V+ G++KL  V   K+  V    P S T ++EY +HVF   GEQL ER GFF    Y  +FFA+++  + E+LF AT   +  + +F++FCT+  +      DE+  R LLM +VD+ F    ++ R L   D   I+ + V
Sbjct:  105 LHSWGNCVIHDSRYYLHMVFRFYLKEYHDTARKLGLVLEHPSYQFILDSIYPSTSASKFPPEFRRFLRDNPPRS---PRVPLPLKRSATEVTYAENFEDRSEISTARASIQRIMHKWSSERRCVYPEYLRPGSSKSDFIVERVAYARKVDEVSSGMKKLSAVCTIKLDKVVSQCPISATAHEEYMKHVFVQSGEQLKERFGFFSRESYHEIFFAVKDHGIHEKLFSATSFDVGGYDNFKAFCTRKGR---LSNDEASVRKLLMTVVDVVFLLGCYNRRRLARADAGSIIREAV 391          
BLAST of mRNA_L-elsbetiae_contig1856.5419.1 vs. uniprot
Match: Q6XM02_9PHYC (FirrV-1-B34 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM02_9PHYC)

HSP 1 Score: 135 bits (341), Expect = 3.110e-33
Identity = 82/227 (36.12%), Postives = 120/227 (52.86%), Query Frame = 0
Query:    1 MQEWGNFPVDDHRYYLHMVFRYFFKQYHDHAVAAGHVIPHPSYQYILDTISPNGCANCFPPEFRRFLVDASRRSIATVSLPVPIKGNSQDVTYGSNFEAVPHVSALRRKIESTVLDWRNNQHEVYPFYLRVGNPYNKHIIDAECRARKVGVVTEGLRKLEGVD---LSKMAAVAEARPKSLTMYDEYTRHVFKTHGEQLHERMGFFMLSVYRHVFFALQEFNVLEEL 224
            +Q+W   P DD +YYLHMVFR++ K YHD  V  G VI +PSYQ ILD + P+  A  FPPEFR F+ DA  RS+ T   P+P+KG+++ V+   NFEA+P V+  RR IE     W+      YP YL  G P   ++ +     RK+  V + + KL       L+K+  +    P    +Y +Y ++  +   E+   R    ML  +R  F   +E  +  +L
Sbjct:  113 LQKWATMPEDDPKYYLHMVFRFYMKDYHDFLVNKGQVIFYPSYQTILDILYPSDAAIAFPPEFRAFMKDAHSRSLETPYTPLPVKGDAKKVSLQYNFEALPDVATQRRYIERVFDIWKQTSFCTYPTYLCTGKPGCGYVENQFIYFRKIKRVKKEMEKLVNFPRETLAKLDTLVCKYPLVHEVYLDYAKNSSQFSSERKQFRR--IMLQKFRKHFVMCKELGIHSDL 337          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1856.5419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
B5LWD1_9PHYC4.380e-6540.61Uncharacterized protein n=1 Tax=Feldmannia species... [more]
Q6XM02_9PHYC3.110e-3336.12FirrV-1-B34 n=1 Tax=Feldmannia irregularis virus a... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 257..275
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 276..301
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1856contigL-elsbetiae_contig1856:22358..23263 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1856.5419.1mRNA_L-elsbetiae_contig1856.5419.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1856 22358..23275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1856.5419.1 ID=prot_L-elsbetiae_contig1856.5419.1|Name=mRNA_L-elsbetiae_contig1856.5419.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=302bp
MQEWGNFPVDDHRYYLHMVFRYFFKQYHDHAVAAGHVIPHPSYQYILDTI
SPNGCANCFPPEFRRFLVDASRRSIATVSLPVPIKGNSQDVTYGSNFEAV
PHVSALRRKIESTVLDWRNNQHEVYPFYLRVGNPYNKHIIDAECRARKVG
VVTEGLRKLEGVDLSKMAAVAEARPKSLTMYDEYTRHVFKTHGEQLHERM
GFFMLSVYRHVFFALQEFNVLEELFVATGAGMEVFVSFQSFCTQSTKSPG
FERDESLCRALLMVIVDICFFFYVFDNRVLKEEDPVEIVDKVVREMGQKG
T*
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