prot_L-elsbetiae_contig1856.5410.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1856.5410.1
Unique Name	prot_L-elsbetiae_contig1856.5410.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	192

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig1856.5410.1 vs. uniprot
Match: B5LWB2_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWB2_9PHYC)

HSP 1 Score: 93.6 bits (231), Expect = 1.480e-20
Identity = 82/206 (39.81%), Postives = 112/206 (54.37%), Query Frame = 0

Query:    3 EGTTIMLAALSTVLILYVIQHERKSSRPFLSIVGLKKKKPVAT-------------LGAS--GCNNVSIDSPDFARCSTTLGSGRSVLRSRPRGDNIVSTFTKDNYAGEKLGNPFSVRSGPNLGSGEAFPFSSKSGDNKNNVRGQNFVSNIRQKTLNS--LGAAVSPSSTKLGASAKDIAQATNKLKDTNTVSSNSGGNLNLLHPL 191
            +G TI LA L+ VLIL V Q E K  RP      ++  K VAT             LG S   CN+V++DSPDFARC+TTLG+ R++  ++    N +    K + A   LG             GEAFPF+ KSG  +N+ RG+     +R        LGAAVSP+S      +++I  A+ KL++ N VSSN+GG+LNLL+PL
Sbjct:    4 DGPTITLAILAIVLILCVAQGEMKGPRP------VRVDKEVATSPAPSAELGGRRRLGGSRINCNDVALDSPDFARCATTLGTARTLRNTQKPALNYLQQEYKSDLA--PLGTT----------RGEAFPFTHKSGPIEND-RGR-LPDKVRHMIAGKDHLGAAVSPASM-----SREIEMASQKLENVNQVSSNTGGSLNLLNPL 184

[Close]

BLAST of mRNA_L-elsbetiae_contig1856.5410.1 vs. uniprot
Match: Q6XM21_9PHYC (FirrV-1-B15 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM21_9PHYC)

HSP 1 Score: 77.4 bits (189), Expect = 1.790e-14
Identity = 70/199 (35.18%), Postives = 101/199 (50.75%), Query Frame = 0

Query:    3 EGTTIMLAALSTVLILYVI----QHERKS-------SRPFLSIVGLKKKKPVATLGASGCNNVSIDSPDFARCSTTLGSGRSVLRSRPRGDNIVSTFTKDNYAGEKLGNPFSVRSGPNLGSGEAFPFSSKSGDNKNNVRGQNFVSNIRQKTLNSLGAAVSPSSTKLGASAKDIAQATNKLKDTNTVSSNSGGNLNLLHP 190
            +  T++LA L  VL+++++    +H+R         S P  + +G +++   + L    C+NV++DSPDFARC+TTLG+     R  PR              GE    PF+ +SGP   +       S S  N+      N            LGAAVSPSS   GAS  ++  ATNKL+D N VS+ +GGNLNLL+P
Sbjct:    2 DAPTVVLAGLVIVLVVFMLTKNGKHKRDKKPPAPAPSAPTEAELGSRQRLGGSRLKGIDCDNVALDSPDFARCATTLGA----RRPNPR------------LKGEAF--PFTEKSGPLEANALQRKIQSVSAQNRQGGVPLNKAF---------LGAAVSPSSRSAGAS-NEMEMATNKLEDVNEVSTYAGGNLNLLNP 172

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1856.5410.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1856.5410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
B5LWB2_9PHYC	1.480e-20	39.81	Uncharacterized protein n=1 Tax=Feldmannia species...	[more]
Q6XM21_9PHYC	1.790e-14	35.18	FirrV-1-B15 n=1 Tax=Feldmannia irregularis virus a...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..22
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 23..191
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..23 score: 0.515
None	No IPR available	TMHMM	TMhelix		coord: 4..21

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1856	contig	L-elsbetiae_contig1856:12767..13420 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1856.5410.1	mRNA_L-elsbetiae_contig1856.5410.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1856 12767..13420 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1856.5410.1 ID=prot_L-elsbetiae_contig1856.5410.1|Name=mRNA_L-elsbetiae_contig1856.5410.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=192bp
MSEGTTIMLAALSTVLILYVIQHERKSSRPFLSIVGLKKKKPVATLGASG
CNNVSIDSPDFARCSTTLGSGRSVLRSRPRGDNIVSTFTKDNYAGEKLGN
PFSVRSGPNLGSGEAFPFSSKSGDNKNNVRGQNFVSNIRQKTLNSLGAAV
SPSSTKLGASAKDIAQATNKLKDTNTVSSNSGGNLNLLHPL*