mRNA_L-elsbetiae_contig1856.5409.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1856.5409.1 vs. uniprot
Match: B5LWB1_9PHYC (Putative VLTF2 transcription factor n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWB1_9PHYC) HSP 1 Score: 226 bits (575), Expect = 9.930e-71 Identity = 123/246 (50.00%), Postives = 156/246 (63.41%), Query Frame = 1 Query: 40 WPSSTDLLCHNCCHVFEGVPVPLPQTYDRVRKIYYCSGNFCSWQCSKTYNMTQTPLSGRGNRNMYIALLAYKTWVKYRGSHVDIVKGVRINRPLNGAMMTYATYCIHPFPPREVLRVFGGSTSIDEYRKGSFGIIPPNEALVETPFLTSRQRLLLPFLDASKKDPPDSSSKPFSGSGLDTTPLKMRSSTSTTQKIESSMAHKHSNAFCTKLNRAKWEDSVIKRKRVLTSKNTLMSTMGVVVEKKKR 777 WP+STD LC +CCH +GVPVPLPQ+YD ++K+Y+C G FCSWQC K YNM T +GRGNRNMYIALLA++TWVK R +VD + +R TYA I+P PP E LR+FGG +I E+RKGSFGI+ P EA V+ PF T+RQRL L GLD R E+S H HSN+FC KL++A+ + S++KRK+ + KNTLMSTMGVVVE +K+ Sbjct: 12 WPTSTDNLCQHCCHPIDGVPVPLPQSYDTLKKVYHCRGQFCSWQCVKAYNMRSTVPAGRGNRNMYIALLAHRTWVKVR-KNVDDFERLR----------TYACTSINPAPPPESLRIFGGDKTIHEFRKGSFGIVHPEEATVDIPFATTRQRLSL---------------------GLDHNDDSRR----VLGNRENSGVHNHSNSFCAKLDKARTDKSIMKRKKRDSDKNTLMSTMGVVVETRKK 221
BLAST of mRNA_L-elsbetiae_contig1856.5409.1 vs. uniprot
Match: Q8QNI1_ESV1K (EsV-1-96 n=2 Tax=root TaxID=1 RepID=Q8QNI1_ESV1K) HSP 1 Score: 201 bits (511), Expect = 3.710e-60 Identity = 109/271 (40.22%), Postives = 164/271 (60.52%), Query Frame = 1 Query: 4 FGEDD-EILRS-VAWPSSTDLLCHNCCHVFEGVPVPLPQTYDRVRKIYYCSGNFCSWQCSKTYNMTQTPLSGRGNRNMYIALLAYKTWVKYRGSHVDIVKGVRINRPLNGAMMTYATYCIHPFPPREVLRVFGGSTSIDEYRKGSFGIIPPNEALVET-PFLTSRQRLLLPFLDAS----------KKDPPDSSSKPFSGSGLDTTPLKMRSSTSTTQKIESSMAHKHSNAFCTKLNRAKWEDSVIKRKRVLTSKNTLMSTMGVVVEKKKR 777 F EDD +++++ + WP S D CHNC H FEGVPVPLP + D +R +Y+C G FCSWQC+K++NM +T +GRGNRNMYI++LAYKTW+K + S +DI + M TY Y +HP PR L+ FGG SI+EYRK GIIPP+E + +T P L R+ +LPF+D K ++ PF G T++I+++ + +N+F +L RA+ + ++++RK+ L NTL+++MG+ ++K+ R Sbjct: 48 FHEDDTDVVKACLQWPLSYDKRCHNCAHFFEGVPVPLPVSRDDLRHVYFCEGKFCSWQCAKSFNMRETSPAGRGNRNMYISVLAYKTWIKLKKSVIDIETKQK--------MKTYCDYRLHPAAPRAKLQEFGGEMSIEEYRKDFCGIIPPSEIIEKTSPLLNIRRMCVLPFIDTDSAGSCPNVLRKSVQHIEATAPFVG----------------TRRIDTNREQEFNNSFVDRLKRARLDPAIMRRKKELDVSNTLLASMGIEIKKRSR 294
BLAST of mRNA_L-elsbetiae_contig1856.5409.1 vs. uniprot
Match: Q6XM22_9PHYC (FirrV-1-B14 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM22_9PHYC) HSP 1 Score: 186 bits (471), Expect = 8.030e-55 Identity = 107/253 (42.29%), Postives = 145/253 (57.31%), Query Frame = 1 Query: 19 EILRSVAWPSSTDLLCHNCCHVFEGVPVPLPQTYDRVRKIYYCSGNFCSWQCSKTYNMTQTPLSGRGNRNMYIALLAYKTWVKYRGSHVDIVKGVRINRPLNGAMMTYATYCIHPFPPREVLRVFGGSTSIDEYRKGSFGIIPPNEALVETPFLTSRQRLLLPFLDASKKDPPDSSSKPFSGSGLDTTPLKMRSSTSTTQKIESSMAHKHSNAFCTKLNRAKWEDSVIKRKRVLTSKNTLMSTMGVVVEKKKR 777 E + WP+S ++ CHNCCH F+GVPVPLP +YD R++Y C GNFCSWQC K YN+ T ++G+G+RNMYIALLAYKTW K +H + A+ YA I P RE L++FGG SI EYR+G FGI+PP+EA + P+++ RQR +D PFS T+P RS+ T+ E++ K + +KR++ T NTLMS+MGV+VEKKK+ Sbjct: 17 EFHKMTGWPTSANVCCHNCCHPFDGVPVPLPYSYDERRRVYLCKGNFCSWQCVKAYNIQDTLVTGKGDRNMYIALLAYKTWYKLT-AHTRLATNDGYQ-----ALKGYAYTSIQPAQSRENLQMFGGPLSIQEYRRGFFGIMPPDEAFLHPPYVSIRQR-------EKTRD----GITPFSLCSASTSPFS-RSNGIGTKPREATAGQKENMGM-------------MKRRQKNTDTNTLMSSMGVIVEKKKK 238
BLAST of mRNA_L-elsbetiae_contig1856.5409.1 vs. uniprot
Match: Q6XLU1_9PHYC (FirrV-1-I5 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLU1_9PHYC) HSP 1 Score: 168 bits (426), Expect = 6.400e-48 Identity = 103/250 (41.20%), Postives = 138/250 (55.20%), Query Frame = 1 Query: 40 WPSSTDLLCHNCCHVFEGVPVPLPQTYDRVRKIYYCSGNFCSWQCSKTYNMTQTPLSGRGNRNMYIALLAYKTWVKY--RGSHVDIVKGVRINRPLNGAMMTYATYCIHPFPPREVLRVFGGSTSIDEYRKGSFGIIPPNEA--LVETPFLTSRQRLLLPFLDASKKDP--PDSSSKPFSGSGLDTTPLKMRSSTSTTQKIESSMAHKHSNAFCTKLNRAKWEDSVIKRKRVLTSKNTLMSTMGVVVEKK 771 WP T+ CHNCCH FEGVPVPLP YD +++Y+CSG+FCSWQC+K YN+ SG+GNRNMYI+LLA+KTWVK + SH GV + ++ TYA I P PPRE L +FGG+ +I +YR+G FGIIPP E + P R+RL F + ++S + S TP+ +++ ++ V KR++ NTLMS+MGVVVEKK Sbjct: 27 WPRRTESCCHNCCHPFEGVPVPLPYFYDERKQVYFCSGSFCSWQCAKAYNIQLPVSSGKGNRNMYISLLAHKTWVKIMSKTSH-----GVP-----HESLKTYAFTKIDPAPPRETLHMFGGNKTIQQYREGFFGIIPPEEIHRFRQEPPSILRERLFTSFPGTAPVTAVVAAAASVAIAASATTFTPVFPKATARAPLAVQ---------------------PPVPKRRQKTNDTNTLMSSMGVVVEKK 245
BLAST of mRNA_L-elsbetiae_contig1856.5409.1 vs. uniprot
Match: A0A6C0KCC1_9ZZZZ (MYM-type domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KCC1_9ZZZZ) HSP 1 Score: 85.9 bits (211), Expect = 3.340e-16 Identity = 55/172 (31.98%), Postives = 78/172 (45.35%), Query Frame = 1 Query: 1 VFGEDDEILRSVAWPSSTDLLCHNCCHVFEGVPVPLPQTYDRVRKIYYCSGNFCSWQCSKTYNMTQTPLSGRGNRNMYIALLAYKTWVKYRGSHVDIVKGVRINRPLNGAMMTYATYCIHPFPPREVLRVFGGSTSIDEYRKG--------SFGIIPPNEALVETPFLTSRQ 492 + E EI V P +D C CCH FEG P LP TY + SGNFCSW C+K+YN SG+G++ + ++L K +G + CI P PPR+ L FGG+ SI+++R+ S G++ N + E TSR+ Sbjct: 117 IISERVEIQGEV--PKCSDAACWWCCHKFEGRPAFLPSTYSEEHDSFKVSGNFCSWNCAKSYNY-----SGKGSKWAFRSMLLKFMVTKLQGECI----------------------CIRPAPPRDQLEFFGGNLSIEQFRESNNKNFSTNSTGLVKLNSSFEEKKLHTSRR 259
BLAST of mRNA_L-elsbetiae_contig1856.5409.1 vs. uniprot
Match: A0A836CI69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI69_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.260e-11 Identity = 47/124 (37.90%), Postives = 63/124 (50.81%), Query Frame = 1 Query: 61 LCHNCCHVFEGVPVPLPQTYDRVRKIYYCSGNFCSWQCSKTYNMTQTPLSGRGNRNMYIALLAYKTWVKYRGSHVDIVKGVRINRPLNGAMMTYATYCIHPFPPREVLRVFGGSTSIDEYRKGS 432 +C N CH F+ P +P Y++ + Y GNFCS+ C+KTY M G G YIAL A ++ +Y G+ KGV + P RE L++FGGS SIDE+RKGS Sbjct: 64 VCWNDCHEFDWEPCRIPLLYNKQLGMCYSQGNFCSFSCAKTYCMHNRLSKGGGVT--YIALEANRSRRRYMGTQ----KGVN------------DVIYVKSVPVRERLKMFGGSMSIDEFRKGS 169
BLAST of mRNA_L-elsbetiae_contig1856.5409.1 vs. uniprot
Match: A0A2E4II44_9BACT (MYM-type domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A2E4II44_9BACT) HSP 1 Score: 70.1 bits (170), Expect = 3.670e-11 Identity = 47/159 (29.56%), Postives = 68/159 (42.77%), Query Frame = 1 Query: 64 CHNCCHVFEGVPVPLPQTYDRVRKIYYCSGNFCSWQCSKTYNMTQTPLSGRGNRNMYIALLAYKTWVKYRGSHVDIVKGVRINRPLNGAMMTYATYC----IHPFPPREVLRVFGGSTSIDEYRKGSFGIIPPNEALVETPFLTSRQRLLLPFLDASKK 528 C CCH F+G P+ LP +D R + +GNFCSW C K+Y + KY + I+ G N MM Y + P PPR L VFGG+ +IDE+RK ++ P+ + ++PF+ +KK Sbjct: 3 CWWCCHPFDGSPLQLPYKHDDRRNTFTTTGNFCSWSCMKSYAID-----------------------KYGVNRGGIICG-------NIIMMRRRMYNQSGHVKPAPPRYSLDVFGGTMTIDEFRKNQXXXXXXXXEIISKPYKDN----VIPFVSNTKK 127
BLAST of mRNA_L-elsbetiae_contig1856.5409.1 vs. uniprot
Match: A0A6C0LY56_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LY56_9ZZZZ) HSP 1 Score: 70.1 bits (170), Expect = 2.570e-10 Identity = 38/133 (28.57%), Postives = 68/133 (51.13%), Query Frame = 1 Query: 43 PSSTDLLCHNCCHVFEGVPVPLPQTYDRVRKIYYCSGNFCSWQCSKTYNMTQTPLSGRGNRNMYIALLAYKTWVKYRGSHVDIVKGVRINRPLNGAMMTYATYCIHPFPPREVLRVFGGSTSIDEYRKGSFGI 441 P + +C CCH F+ +P+ LP+ Y+ + + GNFCS+ C+ YN+ Q +KTW +Y S +++ + + + N + + A PPR++L++FGG SI+E+R+ + I Sbjct: 146 PKENETVCWWCCHQFDTLPIGLPERYNEGK--FQLHGNFCSFNCAHAYNIQQND---------------FKTWERY--SLLNLYRKLVLGSSQNHSRIMSA-------PPRQILQMFGGKMSIEEFRENNSNI 252
BLAST of mRNA_L-elsbetiae_contig1856.5409.1 vs. uniprot
Match: A0A6C0J9N8_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0J9N8_9ZZZZ) HSP 1 Score: 64.7 bits (156), Expect = 2.850e-8 Identity = 46/172 (26.74%), Postives = 78/172 (45.35%), Query Frame = 1 Query: 16 DEILRSVAWPSSTDLLCHNCCHVFEGVPVPLPQTYDRVRKIYYCSGNFCSWQCSKTYNMTQTPLSGRGNRNMYIALLAYKTWVKYRGSHVDIVKGVRINRPLNGAMMTYATYCIHPFPPREVLRVFGGSTSIDEYRKGSFGIIPPNEALVETPFLTSRQRLLLPFLDASKKD 531 +E + WP +++ C CCH F+ +P LP Y K++Y GNFCS +CS +YN SG +++ TW +Y + L + + I PP+ L++FGG +I+E+R + + N +V P ++ ++P L+ KD Sbjct: 247 NEYNKRKEWPKVSNIKCFWCCHNFDNIPCALP--YKFKEKVFYVFGNFCSPECSASYNFD----SGADDKD---------TWERYS-----------LLNHLYSIIYDTSELTIKLAPPKMSLKIFGGRLTIEEFRDCNNDYLK-NYKIVLPPMVS-----IIPSLEEINKD 386
BLAST of mRNA_L-elsbetiae_contig1856.5409.1 vs. uniprot
Match: A0A6C0JVM5_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JVM5_9ZZZZ) HSP 1 Score: 59.7 bits (143), Expect = 6.130e-7 Identity = 44/145 (30.34%), Postives = 63/145 (43.45%), Query Frame = 1 Query: 19 EILRSVAWPSSTD-----LLCHNCCHVFEGVPVPLPQTYDRVRKIYYCSGNFCSWQCSKTYNMTQTPLSGRGNRNMYIALLAYKTWVKYRGSHVDIVKGVRINRPLNGAMMTYATYCIHPFPPREVLRVFGGSTSIDEYRKGSFG 438 EIL+SV S + +C CC+ F LP+ YD + IY G+FCS +C+ YN LS W+++ + R L Y T + P PPR +LR+FGGS I +YR+ + G Sbjct: 58 EILKSVLDKVSCEKYNAQTVCFWCCNGFGWTACVLPKFYDTYKNIYIAEGHFCSPECALAYNYADCHLSDSSK------------WLQHC-----------LLRTLYSE--AYTTRDLTPAPPRSLLRMFGGSLDIAQYREYTSG 177 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1856.5409.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1856.5409.1 >prot_L-elsbetiae_contig1856.5409.1 ID=prot_L-elsbetiae_contig1856.5409.1|Name=mRNA_L-elsbetiae_contig1856.5409.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=264bp VFGEDDEILRSVAWPSSTDLLCHNCCHVFEGVPVPLPQTYDRVRKIYYCSback to top mRNA from alignment at L-elsbetiae_contig1856:11674..12465- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1856.5409.1 ID=mRNA_L-elsbetiae_contig1856.5409.1|Name=mRNA_L-elsbetiae_contig1856.5409.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=792bp|location=Sequence derived from alignment at L-elsbetiae_contig1856:11674..12465- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1856:11674..12465- >mRNA_L-elsbetiae_contig1856.5409.1 ID=mRNA_L-elsbetiae_contig1856.5409.1|Name=mRNA_L-elsbetiae_contig1856.5409.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1584bp|location=Sequence derived from alignment at L-elsbetiae_contig1856:11674..12465- (Laminarionema elsbetiae ELsaHSoW15)back to top |