mRNA_L-elsbetiae_contig1856.5405.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1856.5405.1 vs. uniprot
Match: UPI0009BB9D40 (NADAR family protein n=1 Tax=Chryseobacterium phocaeense TaxID=1816690 RepID=UPI0009BB9D40) HSP 1 Score: 92.0 bits (227), Expect = 9.540e-21 Identity = 61/141 (43.26%), Postives = 85/141 (60.28%), Query Frame = 1 Query: 1 ICQTAEHYVMAQKARIGWIDAGGKLDAEEIVRKTSKIINSKTA-EAIRIGGEVEIEDAK-WDNTKFDIVKLANSLKFQSSQYL-VDLIRNSNKILVAAS-VDEVWGCGMSFENPRIRDPAHCEGQNLLGLALMDVRSYLNR 411 + +TAEHY+MA KAR+ EEI+ K ++ S+T +A +G +V+ +AK WD K++IVK AN LKF S L L+ NKIL+ AS D +WG GM +PR ++P +G+NLLG ALM+VR L R Sbjct: 51 VYKTAEHYMMAGKARL--------FKDEEILEK---VLKSETPNDAKSLGRKVKHFEAKLWDAHKYEIVKKANLLKFSQSPRLEAFLLSTDNKILIEASPYDRIWGIGMLESDPRAQNPLLWDGENLLGFALMEVRDELRR 180
BLAST of mRNA_L-elsbetiae_contig1856.5405.1 vs. uniprot
Match: UPI00053382EA (NADAR family protein n=1 Tax=Chryseobacterium oranimense TaxID=421058 RepID=UPI00053382EA) HSP 1 Score: 91.7 bits (226), Expect = 1.310e-20 Identity = 62/141 (43.97%), Postives = 85/141 (60.28%), Query Frame = 1 Query: 1 ICQTAEHYVMAQKARIGWIDAGGKLDAEEIVRKTSKIINSKTA-EAIRIGGEVEIEDAK-WDNTKFDIVKLANSLKFQSSQYLVD-LIRNSNKILVAAS-VDEVWGCGMSFENPRIRDPAHCEGQNLLGLALMDVRSYLNR 411 I +TAEHY+MA KAR+ + E+ + K II S+T +A +G +VE D K WD KF+IVK AN LKF + D L+ ++++LV AS D++WG GM + R DPA EG+NLLG ALM+VR L + Sbjct: 50 IYKTAEHYMMAGKARL--------FNDEKALEK---IIKSETPNQAKSLGRKVENFDPKIWDENKFEIVKWANLLKFAQNPKFKDFLLSTADQVLVEASPYDKIWGIGMLESDSRAADPALWEGENLLGFALMEVRDELKK 179
BLAST of mRNA_L-elsbetiae_contig1856.5405.1 vs. uniprot
Match: UPI0019210BBB (NADAR family protein n=1 Tax=Chryseobacterium endalhagicum TaxID=2797638 RepID=UPI0019210BBB) HSP 1 Score: 90.9 bits (224), Expect = 2.680e-20 Identity = 60/141 (42.55%), Postives = 88/141 (62.41%), Query Frame = 1 Query: 1 ICQTAEHYVMAQKARIGWIDAGGKLDAEEIVRKTSKIINSKTA-EAIRIGGEVEIEDAK-WDNTKFDIVKLANSLKF-QSSQYLVDLIRNSNKILVAAS-VDEVWGCGMSFENPRIRDPAHCEGQNLLGLALMDVRSYLNR 411 + +TAEHY+MA KAR+ + +EI+ K ++ S+T +A +G +V+ D K WD K+DIVK AN LKF Q+ ++ L+ ++KILV AS D++WG GM +PR +P +G+NLLG ALM+VR L R Sbjct: 51 VYKTAEHYMMAGKARL--------FNDDEILEK---VLCSETPNDAKSLGRKVKNFDPKLWDEYKYDIVKKANLLKFSQNPKFEEFLLATNDKILVEASPYDKIWGIGMLESDPRAHNPLLWDGENLLGFALMEVRDELRR 180
BLAST of mRNA_L-elsbetiae_contig1856.5405.1 vs. uniprot
Match: A0A1M6ZTG4_9FLAO (NADAR domain-containing protein n=2 Tax=Chryseobacterium carnipullorum TaxID=1124835 RepID=A0A1M6ZTG4_9FLAO) HSP 1 Score: 90.5 bits (223), Expect = 3.780e-20 Identity = 58/139 (41.73%), Postives = 86/139 (61.87%), Query Frame = 1 Query: 7 QTAEHYVMAQKARIGWIDAGGKLDAEEIVRKTSKIINSKTAEAIR-IGGEVEIEDAK-WDNTKFDIVKLANSLKF-QSSQYLVDLIRNSNKILVAAS-VDEVWGCGMSFENPRIRDPAHCEGQNLLGLALMDVRSYLNR 411 +TAEHY+MA KA++ + +EI+ K I+ ++T + + +G +V+ D K WD K++IVK AN LKF Q+S++ L+ NKIL+ AS D +WG GM + R +DPA G+N+LG ALM+VR L R Sbjct: 53 KTAEHYMMAGKAKL--------FNDQEILEK---IVKAETPDQAKSLGRKVKNFDPKLWDEHKYEIVKNANLLKFSQNSKFKDFLLSTDNKILIEASPYDRIWGIGMLETDSRAKDPALWNGENMLGFALMEVRDELRR 180
BLAST of mRNA_L-elsbetiae_contig1856.5405.1 vs. uniprot
Match: U3A256_VIBPR (NADAR domain-containing protein n=13 Tax=Vibrio TaxID=662 RepID=U3A256_VIBPR) HSP 1 Score: 90.1 bits (222), Expect = 5.990e-20 Identity = 53/135 (39.26%), Postives = 83/135 (61.48%), Query Frame = 1 Query: 10 TAEHYVMAQKARIGWIDAGGKLDAEEIVRKTSKIINSKTAEAIRIGGEVE-IEDAKWDNTKFDIVKLANSLKFQSSQYLVDLIRN-SNKILVAAS-VDEVWGCGMSFENPRIRDPAHCEGQNLLGLALMDVRSYL 405 TAEHY+MA+KA++ G ++I++ T+ EA +G +V+ +++KW +F IV N LKF +Q L + + N SN++LV AS VD++WG G++ +N + +P +GQNLLG ALM+VR L Sbjct: 56 TAEHYMMAEKAKL----FGDNETYQKIIKATNP------GEAKSLGRDVQGFDESKWGENRFQIVVSGNVLKFSQNQKLREFLLNTSNRVLVEASPVDKIWGIGLAVDNQKAENPNLWKGQNLLGFALMEVRDIL 180
BLAST of mRNA_L-elsbetiae_contig1856.5405.1 vs. uniprot
Match: A0A496NBS1_MORSP (NADAR family protein n=1 Tax=Moraxella sp. TaxID=479 RepID=A0A496NBS1_MORSP) HSP 1 Score: 90.1 bits (222), Expect = 6.420e-20 Identity = 55/137 (40.15%), Postives = 79/137 (57.66%), Query Frame = 1 Query: 10 TAEHYVMAQKARIGWIDAGGKLDAEEIVRKTSKIINSKTAEAIRIGGEVE-IEDAKWDNTKFDIVKLANSLKF-QSSQYLVDLIRNSNKILVAAS-VDEVWGCGMSFENPRIRDPAHCEGQNLLGLALMDVRSYLNR 411 TAEHY+MAQKA++ D ++I + K + K A+ + G +++ +D W +FDIV N KF Q+ L+ N+ILV AS VD +WG GM+ +NP I +P H +G NLLG ALM VR L++ Sbjct: 56 TAEHYMMAQKAKL--------FDDDKIFTEILKSKHPKQAKDL--GRKIQNFDDGHWQKHRFDIVTAGNLAKFSQNPDLKAYLLNTGNRILVEASPVDRIWGIGMAKDNPNIHNPHHWQGLNLLGFALMTVRDQLHQ 182
BLAST of mRNA_L-elsbetiae_contig1856.5405.1 vs. uniprot
Match: UPI001E30CA6E (NADAR family protein n=2 Tax=Chryseobacterium TaxID=59732 RepID=UPI001E30CA6E) HSP 1 Score: 89.7 bits (221), Expect = 7.520e-20 Identity = 57/137 (41.61%), Postives = 84/137 (61.31%), Query Frame = 1 Query: 7 QTAEHYVMAQKARIGWIDAGGKLDAEEIVRKTSKIINSKTA-EAIRIGGEVEIEDAK-WDNTKFDIVKLANSLKFQSSQYLVD-LIRNSNKILVAAS-VDEVWGCGMSFENPRIRDPAHCEGQNLLGLALMDVRSYL 405 QTAEHY+MA KAR+ + +E +++ I+NS+T +A +G V+ D K WD K++IV+ AN LKF ++ + L+ +KILV AS D +WG GM +P+ +DP+ G+NLLG ALM+VR L Sbjct: 53 QTAEHYMMAGKARL--------FNDDETLKE---ILNSETPNQAKSLGRNVKNFDPKVWDEQKYEIVRRANLLKFSQNEAFKEFLLSTDDKILVEASPYDTIWGIGMLETDPKAQDPSQWNGENLLGFALMEVRDLL 178
BLAST of mRNA_L-elsbetiae_contig1856.5405.1 vs. uniprot
Match: A0A840KC34_9FLAO (RibA/ribD-fused uncharacterized protein n=1 Tax=Chryseobacterium defluvii TaxID=160396 RepID=A0A840KC34_9FLAO) HSP 1 Score: 89.4 bits (220), Expect = 1.060e-19 Identity = 57/139 (41.01%), Postives = 83/139 (59.71%), Query Frame = 1 Query: 7 QTAEHYVMAQKARIGWIDAGGKLDAEEIVRKTSKIINSKTAEAIR-IGGEVE-IEDAKWDNTKFDIVKLANSLKFQSSQYLVD-LIRNSNKILVAAS-VDEVWGCGMSFENPRIRDPAHCEGQNLLGLALMDVRSYLNR 411 +TAEHY+MA KAR L ++I+ ++I+ S + ++ +G +V+ ++ WD K++IV+ N LKF +Q L D L+ NKILV AS D+VWG GM NP+ +P G+NLLG ALM+VR L R Sbjct: 53 KTAEHYMMAGKAR---------LFDDDII--CNEILKSNDPDMVKKLGRKVKNFDNQLWDEHKYEIVRKGNLLKFSQNQKLRDFLLSTENKILVEASPYDKVWGIGMLENNPKAENPLEWNGENLLGFALMEVRDELKR 180
BLAST of mRNA_L-elsbetiae_contig1856.5405.1 vs. uniprot
Match: A0A0J7IKL1_9FLAO (NADAR domain-containing protein n=1 Tax=Chryseobacterium angstadtii TaxID=558151 RepID=A0A0J7IKL1_9FLAO) HSP 1 Score: 89.0 bits (219), Expect = 1.500e-19 Identity = 57/137 (41.61%), Postives = 86/137 (62.77%), Query Frame = 1 Query: 7 QTAEHYVMAQKARIGWIDAGGKLDAEEIVRKTSKIINSKTA-EAIRIGGEVEIEDAK-WDNTKFDIVKLANSLKF-QSSQYLVDLIRNSNKILVAAS-VDEVWGCGMSFENPRIRDPAHCEGQNLLGLALMDVRSYL 405 +TAEHY+MA KA++ + +EI+++ ++ S+T +A +G +V+ D K WD KF+IVK AN LKF Q+ +Y L+ +KIL+ AS D++WG GM + R DP+ +G+NLLG ALM+VR L Sbjct: 53 KTAEHYMMAGKAKL--------FNDQEILQE---VLKSETPNQAKSLGRKVKSFDPKLWDEHKFEIVKKANFLKFSQNPEYRAFLLSTGDKILIEASPYDKIWGIGMLETDTRAHDPSLWDGENLLGFALMEVRDEL 178
BLAST of mRNA_L-elsbetiae_contig1856.5405.1 vs. uniprot
Match: A0A261GUH3_9GAMM (NADAR domain-containing protein n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GUH3_9GAMM) HSP 1 Score: 89.0 bits (219), Expect = 1.640e-19 Identity = 53/136 (38.97%), Postives = 86/136 (63.24%), Query Frame = 1 Query: 10 TAEHYVMAQKARIGWIDAGGKLDAEEIVRKTSKIINSKTAEAIRIGGEVE-IEDAKWDNTKFDIVKLANSLKFQSSQYLVDLIRNS-NKILVAAS-VDEVWGCGMSFENPRIRDPAHCEGQNLLGLALMDVRSYLN 408 TAEH++MA+KAR+ G +AE+ + ++ EA ++G EV+ E++ W++ +FDIV AN LKF + L + + N+ ++ILV AS VD++WG G++ ++P + +P G NLLG ALM+VR L+ Sbjct: 58 TAEHFMMAEKARLF-----GDSNAEQKI-----LLADNPGEAKKLGREVQGFENSVWEHHRFDIVVKANLLKFGQNAELKEFLLNTGDRILVEASPVDKIWGVGLAMDHPAVENPYQWRGLNLLGFALMEVRLQLS 183 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1856.5405.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1856.5405.1 >prot_L-elsbetiae_contig1856.5405.1 ID=prot_L-elsbetiae_contig1856.5405.1|Name=mRNA_L-elsbetiae_contig1856.5405.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=128bp MAQKARIGWIDAGGKLDAEEIVRKTSKIINSKTAEAIRIGGEVEIEDAKWback to top mRNA from alignment at L-elsbetiae_contig1856:7476..7886- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1856.5405.1 ID=mRNA_L-elsbetiae_contig1856.5405.1|Name=mRNA_L-elsbetiae_contig1856.5405.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=411bp|location=Sequence derived from alignment at L-elsbetiae_contig1856:7476..7886- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1856:7476..7886- >mRNA_L-elsbetiae_contig1856.5405.1 ID=mRNA_L-elsbetiae_contig1856.5405.1|Name=mRNA_L-elsbetiae_contig1856.5405.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=768bp|location=Sequence derived from alignment at L-elsbetiae_contig1856:7476..7886- (Laminarionema elsbetiae ELsaHSoW15)back to top |