prot_L-elsbetiae_contig1856.5403.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1856.5403.1
Unique Nameprot_L-elsbetiae_contig1856.5403.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length116
Homology
BLAST of mRNA_L-elsbetiae_contig1856.5403.1 vs. uniprot
Match: B5LWJ6_9PHYC (Putative cytidine deaminase n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWJ6_9PHYC)

HSP 1 Score: 109 bits (273), Expect = 1.070e-28
Identity = 55/115 (47.83%), Postives = 77/115 (66.96%), Query Frame = 0
Query:    1 MKRSHTHYINVCHALASKSHHPRFHHGSIALKRRGGGILGRGSNRKNLHAEVGSIIDIPNYQ---RYENLVVYVCRVNSKGGFMNSKPCENCVNFMKSNGVSTVYFSDEVGFSKL 112
            MK++H  + ++C  LA +S H  F HGSIA+   G  ++G+GSNR++LHAEV ++ D    +       L VYVCRV+S G FMNS+PC  C+ FM+  GVS VYFSD+ GF+K+
Sbjct:    1 MKKTHETHFDMCRNLAKRSQHSTFRHGSIAVS--GSSVVGKGSNRRSLHAEVSAVKDTVKKKIGKGTRRLKVYVCRVSSAGMFMNSRPCAKCMRFMRDAGVSKVYFSDQFGFAKI 113          
BLAST of mRNA_L-elsbetiae_contig1856.5403.1 vs. uniprot
Match: Q6XM58_9PHYC (FirrV-1-A29 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM58_9PHYC)

HSP 1 Score: 102 bits (255), Expect = 5.590e-26
Identity = 54/102 (52.94%), Postives = 71/102 (69.61%), Query Frame = 0
Query:   12 CHALASKSHHPRFHHGSIALKRRGGGILGRGSNRKNLHAEVGSIIDIPNYQRYENLVVYVCRVNSKGGFMNSKPCENCVNFMKSNGVSTVYFSDEVG-FSKL 112
            C  LA  S HP F HG++   R    I+G+GSNR +LHAEV ++ ++   Q +  L VYVCRVN++G FMNSKPC+NC+N+MK  GV  VY+SD+ G FSKL
Sbjct:   12 CQHLAKFSQHPVFRHGALVTNRTT--IVGKGSNRSSLHAEVSALQNVQGGQ-HMRLRVYVCRVNARGKFMNSKPCQNCMNYMKHRGVYRVYYSDDAGGFSKL 110          
BLAST of mRNA_L-elsbetiae_contig1856.5403.1 vs. uniprot
Match: A0A6C0JAJ1_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JAJ1_9ZZZZ)

HSP 1 Score: 47.8 bits (112), Expect = 7.480e-5
Identity = 17/41 (41.46%), Postives = 30/41 (73.17%), Query Frame = 0
Query:   69 VYVCRVNSKGGFMNSKPCENCVNFMK-SNGVSTVYFSDEVG 108
            +YVCR+N+K  F+NSKPC +C+ ++K +  +  +Y++D  G
Sbjct:   18 LYVCRINNKNEFINSKPCSDCIKYIKKTKNIKHIYYTDNDG 58          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1856.5403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
B5LWJ6_9PHYC1.070e-2847.83Putative cytidine deaminase n=1 Tax=Feldmannia spe... [more]
Q6XM58_9PHYC5.590e-2652.94FirrV-1-A29 n=1 Tax=Feldmannia irregularis virus a... [more]
A0A6C0JAJ1_9ZZZZ7.480e-541.46Uncharacterized protein n=1 Tax=viral metagenome T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002125Cytidine and deoxycytidylate deaminase domainPFAMPF00383dCMP_cyt_deam_1coord: 4..103
e-value: 9.1E-8
score: 31.9
IPR002125Cytidine and deoxycytidylate deaminase domainPROSITEPS51747CYT_DCMP_DEAMINASES_2coord: 3..115
score: 13.515
NoneNo IPR availableGENE3D3.40.140.10coord: 1..113
e-value: 4.4E-10
score: 41.4
IPR016193Cytidine deaminase-likeSUPERFAMILY53927Cytidine deaminase-likecoord: 4..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1856contigL-elsbetiae_contig1856:2772..3119 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1856.5403.1mRNA_L-elsbetiae_contig1856.5403.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1856 2772..3119 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1856.5403.1 ID=prot_L-elsbetiae_contig1856.5403.1|Name=mRNA_L-elsbetiae_contig1856.5403.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=116bp
MKRSHTHYINVCHALASKSHHPRFHHGSIALKRRGGGILGRGSNRKNLHA
EVGSIIDIPNYQRYENLVVYVCRVNSKGGFMNSKPCENCVNFMKSNGVST
VYFSDEVGFSKLKFF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002125CMP_dCMP_dom
IPR016193Cytidine_deaminase-like