mRNA_L-elsbetiae_contig18539.5394.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig18539.5394.1
Unique NamemRNA_L-elsbetiae_contig18539.5394.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: D7FPQ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPQ0_ECTSI)

HSP 1 Score: 399 bits (1025), Expect = 8.260e-126
Identity = 210/274 (76.64%), Postives = 232/274 (84.67%), Query Frame = 1
Query:   19 GTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGASGVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQVWKMLASVLYMSNLEFDKVDHEQGEIASISDREVCT 840
            GTILIAVNPLRRV +PEM++Y++R LN ETPHPYAIAELAYHQMRLGAGR  ANQSIVVSGESGAGKTETSKIIL    +                  SVGGVA+LDQKVV+SSPILESFGNAKTLRNNNSSRFGKFLKLQFT+DKYRLAGAF++TYLLEKSRVL QG GERNFHILYQLVAGASGVG+DLKL     YKI+SQSDCT LD VDDA EF+ VK AFDTIG+ EESQ+QVW+MLASVL++SN+EFDKVDHEQGEIA+ISDRE  +
Sbjct:   95 GTILIAVNPLRRVPNPEMTDYMDRSLNPETPHPYAIAELAYHQMRLGAGRKVANQSIVVSGESGAGKTETSKIILTFLTHR-----------------SVGGVASLDQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTKDKYRLAGAFIETYLLEKSRVLTQGKGERNFHILYQLVAGASGVGIDLKLQDVESYKILSQSDCTTLDDVDDAAEFRTVKGAFDTIGMGEESQLQVWQMLASVLHLSNVEFDKVDHEQGEIATISDREALS 351          
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: A0A6H5JUQ2_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUQ2_9PHAE)

HSP 1 Score: 370 bits (951), Expect = 1.320e-124
Identity = 198/293 (67.58%), Postives = 229/293 (78.16%), Query Frame = 1
Query:   16 QGTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAE------------------LAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGASGVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQVWKMLASVLYMSNLEFDKVDHEQGEIASISDREVCT 840
            QGTILIAVNPLRR+ DP++SEY+NR L+ E PHPYAIAE                  LAYHQMRLG GR AANQSIVVSGESGAGKTETSKIIL    +                  S GGVA+LDQKV++SSPILESFGNAKTLRNNNSSRFGKFLKLQFT+DK+ LAGAF++TYLLEKSRVL  G GERNFH+LYQLVAGASG+ ++LKL G   YKI+S+ DCTALDGVDDA EF+ V+AAFDTIG+ EESQ+QVW+MLA++L++SNLEF+KVDH+QGEIA ISD E  +
Sbjct:   91 QGTILIAVNPLRRIPDPDVSEYMNRSLDPEAPHPYAIAEVTFRSVPWSLVISAFPGALAYHQMRLGTGRKAANQSIVVSGESGAGKTETSKIILTFLTHR-----------------SAGGVASLDQKVMDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTKDKHLLAGAFIETYLLEKSRVLTPGMGERNFHVLYQLVAGASGLALNLKLEGVGSYKILSRGDCTALDGVDDANEFRGVRAAFDTIGMSEESQLQVWQMLAAMLHLSNLEFNKVDHQQGEIADISDSETLS 366          
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: A0A6H5JRA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA1_9PHAE)

HSP 1 Score: 382 bits (981), Expect = 5.880e-120
Identity = 203/274 (74.09%), Postives = 224/274 (81.75%), Query Frame = 1
Query:   19 GTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGASGVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQVWKMLASVLYMSNLEFDKVDHEQGEIASISDREVCT 840
            GTILIAVNPL+RV  P+M +Y+++ LN ETPHPYAIAELAYHQMRLGAGR  ANQSIVVSGESGAGKTETSKIIL                       SVGG+ANLDQKVV+SSPILESFGNAKTLRNNNSSRFGKFLKLQFT+DKYRLAGAF++TYLLEKSRVL QGTGERNFHILYQLVAGAS +  DLKL     YKI++QS+C  LD +DD EEF  VK+AFDTIG+  ESQ QVW+MLASVL+MSNLEFDKVDHEQGEIASISDRE  +
Sbjct:  109 GTILIAVNPLQRVPSPDMRDYMDKSLNPETPHPYAIAELAYHQMRLGAGRKLANQSIVVSGESGAGKTETSKIILSF-----------------LTRRSVGGIANLDQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTKDKYRLAGAFIETYLLEKSRVLTQGTGERNFHILYQLVAGASALDDDLKLEDVESYKILAQSECVTLDCMDDTEEFATVKSAFDTIGMSAESQAQVWRMLASVLHMSNLEFDKVDHEQGEIASISDREALS 365          
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: D8LMS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS5_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 4.810e-119
Identity = 204/274 (74.45%), Postives = 223/274 (81.39%), Query Frame = 1
Query:   19 GTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGASGVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQVWKMLASVLYMSNLEFDKVDHEQGEIASISDREVCT 840
            GTILIAVNPL+RV  P+M +Y+++ LN ETPHPYAIAELAYHQMRLGAGR  ANQSIVVSGESGAGKTETSKIIL                       SVGGVANLDQKVV+SSPILESFGNAKTLRNNNSSRFGKFLKLQFT DKYRLAGAF++TYLLEKSRVL QGTGERNFHILYQLVAGAS +  DLKL     YKI++QS+C  LD +DD EEF  VK+AFDTIG+  ESQ QVW+MLASVL+MSNLEFDKVDHEQGEIASISDRE  +
Sbjct:  109 GTILIAVNPLQRVPSPDMRDYMDKSLNPETPHPYAIAELAYHQMRLGAGRKMANQSIVVSGESGAGKTETSKIILSF-----------------LTRRSVGGVANLDQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTTDKYRLAGAFIETYLLEKSRVLTQGTGERNFHILYQLVAGASALDDDLKLEDVESYKILAQSECVTLDCMDDTEEFGTVKSAFDTIGMSPESQAQVWRMLASVLHMSNLEFDKVDHEQGEIASISDREALS 365          
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: D8LHQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ0_ECTSI)

HSP 1 Score: 380 bits (977), Expect = 5.750e-119
Identity = 199/274 (72.63%), Postives = 226/274 (82.48%), Query Frame = 1
Query:   19 GTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGASGVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQVWKMLASVLYMSNLEFDKVDHEQGEIASISDREVCT 840
            GTILIAVNPLRR+ DP++SEY+NR L+ E PHPYAIAELAYHQMRLG GR AANQSIVVSGESGAGKTETSKIIL    +                  S GGVA+LDQKVV+SSPILESFGNAKTLRNNNSSRFGKFLKLQFT+DK+RLAGAF++TYLLEKSRVL  G GERNFH+LYQLVAGAS +G+DLKL G   YKI+S  DCTALDGVDDA EFK V+AAFDTI + EESQ+QVW+ LA++L++SNLEF+KVDH+QGEIA ISD E  +
Sbjct:  111 GTILIAVNPLRRIPDPDVSEYMNRSLDPEAPHPYAIAELAYHQMRLGTGRKAANQSIVVSGESGAGKTETSKIILTFLTHR-----------------SAGGVASLDQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTKDKHRLAGAFIETYLLEKSRVLTPGMGERNFHVLYQLVAGASDLGLDLKLEGVGSYKILSHGDCTALDGVDDANEFKGVRAAFDTIRMSEESQLQVWQTLAAMLHLSNLEFNKVDHQQGEIADISDSETLS 367          
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: D7G4Q7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q7_ECTSI)

HSP 1 Score: 369 bits (947), Expect = 1.740e-114
Identity = 193/272 (70.96%), Postives = 224/272 (82.35%), Query Frame = 1
Query:   19 GTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAG--ASGVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQVWKMLASVLYMSNLEFDKVDHEQGEIASISDR 828
            GTILIAVNPLR+V+DPEMS+Y+NR L+ E PHPYAIAEL+YHQMRLG GR AANQSIVVSGESGAGKTETSKIILR   +                  SVGGV  L+QKVV+SSPILESFGNAKTLRNNNSSRFGKFLK+QFT+DKYRLAGAF++TYLLEKSRVL QG GERNFHILY+LVAG  ASG+  +LKLG A  YKI+ ++ C  LDGVDD ++F+ V+ AFDTIG+D+++Q+QVWK LA+VL+MSNL FDK D EQGEIA+ISDR
Sbjct:  117 GTILIAVNPLRKVADPEMSKYMNRSLDPEAPHPYAIAELSYHQMRLGGGRKAANQSIVVSGESGAGKTETSKIILRFLTHR-----------------SVGGVTGLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTKDKYRLAGAFIETYLLEKSRVLTQGKGERNFHILYELVAGGAASGLATELKLGSAETYKILGENGCITLDGVDDVKQFQNVQKAFDTIGMDKDTQLQVWKALAAVLHMSNLRFDKADSEQGEIAAISDR 371          
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: A0A6H5JLA2_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA2_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 1.750e-110
Identity = 182/289 (62.98%), Postives = 219/289 (75.78%), Query Frame = 1
Query:   16 QGTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGA--SGVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQV-----------------WKMLASVLYMSNLEFDKVDHEQGEIASISD 825
            QGT+LIAVNPLRR+ DP M  ++NRPLN ETPHPYAIAEL+YHQMRLGAGR AANQSI+VSGESGAGKTE+SKIIL+    +   +G +  R       SVGGV +L+QKVV+SSPILESFGNAKT+RNNNSSRFGKFLK+QFT DKYRLAGAF++TYLLEKSRVL Q  GERNFHILY+LV GA  SG+  DL+L G   Y+++S S CT L+GVDDA  F+ V+ A  TIG+DE++QMQV                 WK LA+VL+MSN+ F+  D  QGE+A++ D
Sbjct:    4 QGTVLIAVNPLRRLEDPPMESFMNRPLNPETPHPYAIAELSYHQMRLGAGRKAANQSIIVSGESGAGKTESSKIILKRDNSAAVKKGFLTHR-------SVGGVTSLEQKVVDSSPILESFGNAKTMRNNNSSRFGKFLKMQFTRDKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLAKDLQLQGVEAYRVLSASGCTELEGVDDAAHFEEVRTACRTIGLDEDTQMQVRRRRGRWLVYVCDEQMVWKALAAVLHMSNVTFEGKDDAQGEVAAVKD 285          
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: A0A836C8E2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E2_9STRA)

HSP 1 Score: 293 bits (751), Expect = 4.280e-87
Identity = 162/271 (59.78%), Postives = 199/271 (73.43%), Query Frame = 1
Query:   10 SHQGTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGAS-GVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQVWKMLASVLYMSNLEFDKVDHEQGEIASI 819
            ++ GTILI VNPLR V DP MSE+++  L+ E PHPYAIAELAYHQM+LG+G    NQSIVVSGESGAGKTETSKII++   +  KG                 GV  LDQ+V+ESSPILESFGNAKTLRN NSSRFGKFLKLQFT+D   LAG +++TYLLEKSRVL+Q  GERNFHILY+LVAGA   +   L LG A  Y I+SQ  C ALDGVDDA +F+ V  AF T+G+D  +Q QVW++LA+VL+++ L FD  +  +GE+A++
Sbjct:   98 TYMGTILICVNPLRTVPDPPMSEFLDVSLDPEKPHPYAIAELAYHQMKLGSG-GCTNQSIVVSGESGAGKTETSKIIIKYLAHRTKG-----------------GVGGLDQRVIESSPILESFGNAKTLRNANSSRFGKFLKLQFTKDTAALAGGYMETYLLEKSRVLSQARGERNFHILYELVAGADPALKRQLGLGSAQDYHILSQGGCIALDGVDDAAQFRDVVHAFGTVGLDAATQGQVWRLLAAVLHVACLAFDVEETAEGEVAAV 350          
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: A0A836C7J1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7J1_9STRA)

HSP 1 Score: 282 bits (721), Expect = 9.460e-84
Identity = 157/272 (57.72%), Postives = 193/272 (70.96%), Query Frame = 1
Query:   19 GTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGAS-GVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQVWKMLASVLYMSNLEFDKVDHEQGEIASISDRE 831
            GT+LI VNPL+ V DP M  YV + L+ E PHPYAIAELAYHQM+LG G    NQS+VVSGESGAGKTETSKII++                   A  + GGV  LD +V+ESSPILESFGNAKTLRN NSSRFGKFLKLQFT D   LAG F++TYLLEKSRVL+Q   ERNFHILY+LVAGA   +   L LG A  Y I+ QS CT L+GVDDAE+F+ V  AF+T+G+  E Q QVW+MLA+VL+ + ++F   +  +GE+A++  ++
Sbjct:  117 GTLLICVNPLQVVPDPPMETYVGQQLDPEAPHPYAIAELAYHQMKLGTG-GLTNQSVVVSGESGAGKTETSKIIIKY-----------------LAHRTQGGVGGLDNRVIESSPILESFGNAKTLRNANSSRFGKFLKLQFTADTAALAGGFMETYLLEKSRVLSQAQNERNFHILYELVAGADPALKKRLGLGSAKDYHILFQSGCTTLEGVDDAEQFRGVVHAFNTVGLTAEVQEQVWRMLAAVLHTACMKFAAEETAEGEVATVPQKD 370          
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: D8LMW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW4_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 7.910e-77
Identity = 142/217 (65.44%), Postives = 163/217 (75.12%), Query Frame = 1
Query:   19 GTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGASGVGVDLKLGGASPYKIISQSDCTALDGVDDAE 669
            GT+LIAVNPLRR+ DP M  ++NRPLN ETPHPYAIAEL+YHQMRLGAGR AANQSI+VSGESGAGKTE+SKIIL+   +                  SVGGV +L+QKVV+SSPILESFGNAKTLRNNNSSRFGKFLK+QFT DKYRLAGAF++TYLLEKSRVL Q  GERNFHILY+LV GA+  G+   L        +      A +G DDA+
Sbjct:  101 GTVLIAVNPLRRLEDPPMESFMNRPLNPETPHPYAIAELSYHQMRLGAGRKAANQSIIVSGESGAGKTESSKIILKFLTHR-----------------SVGGVTSLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTRDKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLSKDLQVWKTLAAVLHMSNVAFEGKDDAQ 300          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPQ0_ECTSI8.260e-12676.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JUQ2_9PHAE1.320e-12467.58Myosin motor domain-containing protein n=1 Tax=Ect... [more]
A0A6H5JRA1_9PHAE5.880e-12074.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMS5_ECTSI4.810e-11974.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LHQ0_ECTSI5.750e-11972.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4Q7_ECTSI1.740e-11470.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLA2_9PHAE1.750e-11062.98Myosin motor domain-containing protein n=1 Tax=Ect... [more]
A0A836C8E2_9STRA4.280e-8759.78P-loop containing nucleoside triphosphate hydrolas... [more]
A0A836C7J1_9STRA9.460e-8457.72P-loop containing nucleoside triphosphate hydrolas... [more]
D8LMW4_ECTSI7.910e-7765.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18539contigL-elsbetiae_contig18539:48..1883 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score402.9
Seed ortholog evalue1.2e-109
Seed eggNOG ortholog2880.D7FPQ0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5022@1,KOG0160@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size843
Cds size843
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18539.5394.1prot_L-elsbetiae_contig18539.5394.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig18539 48..1883 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815772.0869186-CDS-L-elsbetiae_contig18539:47..1791622815772.0869186-CDS-L-elsbetiae_contig18539:47..179Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18539 48..179 +
1691683092.1397853-CDS-L-elsbetiae_contig18539:47..1791691683092.1397853-CDS-L-elsbetiae_contig18539:47..179Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18539 48..179 +
1622815772.0987058-CDS-L-elsbetiae_contig18539:557..6701622815772.0987058-CDS-L-elsbetiae_contig18539:557..670Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18539 558..670 +
1691683092.1501033-CDS-L-elsbetiae_contig18539:557..6701691683092.1501033-CDS-L-elsbetiae_contig18539:557..670Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18539 558..670 +
1622815772.1089685-CDS-L-elsbetiae_contig18539:716..7821622815772.1089685-CDS-L-elsbetiae_contig18539:716..782Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18539 717..782 +
1691683092.1608996-CDS-L-elsbetiae_contig18539:716..7821691683092.1608996-CDS-L-elsbetiae_contig18539:716..782Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18539 717..782 +
1622815772.1191254-CDS-L-elsbetiae_contig18539:886..11001622815772.1191254-CDS-L-elsbetiae_contig18539:886..1100Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18539 887..1100 +
1691683092.1728668-CDS-L-elsbetiae_contig18539:886..11001691683092.1728668-CDS-L-elsbetiae_contig18539:886..1100Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18539 887..1100 +
1622815772.133675-CDS-L-elsbetiae_contig18539:1287..13561622815772.133675-CDS-L-elsbetiae_contig18539:1287..1356Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18539 1288..1356 +
1691683092.1815355-CDS-L-elsbetiae_contig18539:1287..13561691683092.1815355-CDS-L-elsbetiae_contig18539:1287..1356Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18539 1288..1356 +
1622815772.1439202-CDS-L-elsbetiae_contig18539:1634..18831622815772.1439202-CDS-L-elsbetiae_contig18539:1634..1883Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18539 1635..1883 +
1691683092.1903226-CDS-L-elsbetiae_contig18539:1634..18831691683092.1903226-CDS-L-elsbetiae_contig18539:1634..1883Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18539 1635..1883 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig18539.5394.1

>prot_L-elsbetiae_contig18539.5394.1 ID=prot_L-elsbetiae_contig18539.5394.1|Name=mRNA_L-elsbetiae_contig18539.5394.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=281bp
LLTSHQGTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQM
RLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLIS
AAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTE
DKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGASGVGVDLKLG
GASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQVWKMLA
SVLYMSNLEFDKVDHEQGEIASISDREVCT*
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mRNA from alignment at L-elsbetiae_contig18539:48..1883+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig18539.5394.1 ID=mRNA_L-elsbetiae_contig18539.5394.1|Name=mRNA_L-elsbetiae_contig18539.5394.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1836bp|location=Sequence derived from alignment at L-elsbetiae_contig18539:48..1883+ (Laminarionema elsbetiae ELsaHSoW15)
CTCTTGACATCCCATCAGGGCACCATTCTGATCGCTGTGAACCCGTTGCG AAGAGTGTCCGATCCGGAAATGAGCGAGTATGTTAATCGCCCCCTCAACT CCGAAACTCCACACCCGTACGCCATCGCCGAGGTGAGCGCTTAACACTGC CGCCTGTTCTACAAGTCAAACAATTTCAGGGTAACTTAACACGGTCTTAT AGAGCAGGGAGAGTGAGTTGCTCCTCCAGACGCCCGGAGCAGCAACTTTC TCATATTGATAGATCGCTTGGCGTCTCTCCCGTGGATAGTAGGCGCGCGG GAACTGTGGGGGGAAACGCCGTTCCTCTTTACCCCACGACGTCAGGATTC CTTCAACGCATAGAATTATATCTATATGTTTCCTAAACCTTTCCCTGACA GTCCCCCGTCGTGTTCTCCACGTGATGCTTTTCAACAGGGGCTTGATGCG CCGCTCTCTCTCTCTCTGTTGATGTTGCCTGATGCCACCTCCGTCTGTCG TGTGCTCCAGCTGGCTTACCACCAGATGCGTCTTGGCGCCGGCCGCAATG CCGCAAACCAGTCGATTGTCGTGTCGGGAGAGTCGGGGGCAGGAAAGACG GAGACTTCCAAGATCATTCTTAGGTGAGCATCGGAAATTCTACGTACGTA AAGCTTTTCCTGCCATCAGGATAGGGCGCTATTCTGGGAAGGGGCGGGGC GCTGTTCGATTCCGTTTAATTTCAGCGGCTGTGGGGTGTGAAAGAAGGCA CTGAAGATCCGCAACACGCGGCCATACAACACTTGTCTTTTCTAACCCTA TCGACGCGTGTGCTCTGTTTTCAGGTTTCTCACGCACAGGTCGGTCGGGG GCGTCGCGAACCTGGACCAGAAGGTGGTGGAATCTTCGCCCATCCTAGAG TCGTTCGGCAACGCCAAGACCCTGAGAAACAACAACTCGTCGCGATTCGG AAAGTTTCTCAAGCTGCAGTTCACCGAAGACAAGTACCGCCTCGCCGGGG CTTTCGTAGACACCTACCTGCTGGAGAAAAGCCGCGTGCTCGCGCAGGGA ACGGTGAGCCGGGTATCCTTCCAGTGTCCAAGCTGTTGCGGTTCGCTGCT CCGCTGTGTTTGCGGGAGACATGCTTGTCTCCGAGGGTCAATAAGTCTCC ACGGGGTTGTTTAGCGAGCGCGTCGTGCTGCTGTCTTGTCTTGAGGTCCC CGACGCTGGCATGTCTTGGCTGTCTCTGTTATGACGTCAGGGAGAGCGGA ACTTCCACATCCTGTATCAACTGGTCGCTGGCGCTTCAGGGGTGGGCGTG GACCTCAAGGTGACTCTCATGCTCTCGCTCGTTTTGGTTTTGTCGACCTT GCTATGAGACGCGCGTTTCTGAGCTGTGCGTCTAATGAGTGACATTTGTA GTCGCGCACAGAGAGCCTGGCGCATTCTCTCGCCATCCTCTTGCTGGTTG ATACTTTGCCGGCAGACTACGTGGGGTGTTGTGTGGTTGGGAGAGGTGAA GGACGCTTGTCTTTGCGCGCCCGCGATTTTTCACGTGGCACATACGCGCG GGTTTGGCGTGCTGATTCGATACACCCCGTCGTCCAGCTGGGAGGCGCCA GCCCGTACAAGATCATTTCGCAGAGCGACTGCACCGCCCTGGACGGTGTA GACGACGCCGAGGAGTTCAAGAGGGTGAAGGCCGCGTTCGACACTATAGG GGTAGACGAGGAGTCGCAGATGCAGGTCTGGAAAATGCTGGCGTCGGTGC TGTACATGTCGAACCTCGAGTTTGACAAGGTGGACCACGAGCAGGGCGAG ATCGCCTCCATTTCTGACCGCGAGGTATGTACATAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig18539:48..1883+

>mRNA_L-elsbetiae_contig18539.5394.1 ID=mRNA_L-elsbetiae_contig18539.5394.1|Name=mRNA_L-elsbetiae_contig18539.5394.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1686bp|location=Sequence derived from alignment at L-elsbetiae_contig18539:48..1883+ (Laminarionema elsbetiae ELsaHSoW15)
CTCTTGACATCCCATCAGGGCACCATTCTGATCGCTGTGAACCCGTTGCG
AAGAGTGTCCGATCCGGAAATGAGCGAGTATGTTAATCGCCCCCTCAACT
CCGAAACTCCACACCCGTACGCCATCGCCGAGCTCTTGACATCCCATCAG
GGCACCATTCTGATCGCTGTGAACCCGTTGCGAAGAGTGTCCGATCCGGA
AATGAGCGAGTATGTTAATCGCCCCCTCAACTCCGAAACTCCACACCCGT
ACGCCATCGCCGAGCTGGCTTACCACCAGATGCGTCTTGGCGCCGGCCGC
AATGCCGCAAACCAGTCGATTGTCGTGTCGGGAGAGTCGGGGGCAGGAAA
GACGGAGACTTCCAAGATCATTCTTAGCTGGCTTACCACCAGATGCGTCT
TGGCGCCGGCCGCAATGCCGCAAACCAGTCGATTGTCGTGTCGGGAGAGT
CGGGGGCAGGAAAGACGGAGACTTCCAAGATCATTCTTAGGATAGGGCGC
TATTCTGGGAAGGGGCGGGGCGCTGTTCGATTCCGTTTAATTTCAGCGGC
TGTGGGGATAGGGCGCTATTCTGGGAAGGGGCGGGGCGCTGTTCGATTCC
GTTTAATTTCAGCGGCTGTGGGGTCGGTCGGGGGCGTCGCGAACCTGGAC
CAGAAGGTGGTGGAATCTTCGCCCATCCTAGAGTCGTTCGGCAACGCCAA
GACCCTGAGAAACAACAACTCGTCGCGATTCGGAAAGTTTCTCAAGCTGC
AGTTCACCGAAGACAAGTACCGCCTCGCCGGGGCTTTCGTAGACACCTAC
CTGCTGGAGAAAAGCCGCGTGCTCGCGCAGGGAACGGTCGGTCGGGGGCG
TCGCGAACCTGGACCAGAAGGTGGTGGAATCTTCGCCCATCCTAGAGTCG
TTCGGCAACGCCAAGACCCTGAGAAACAACAACTCGTCGCGATTCGGAAA
GTTTCTCAAGCTGCAGTTCACCGAAGACAAGTACCGCCTCGCCGGGGCTT
TCGTAGACACCTACCTGCTGGAGAAAAGCCGCGTGCTCGCGCAGGGAACG
GGAGAGCGGAACTTCCACATCCTGTATCAACTGGTCGCTGGCGCTTCAGG
GGTGGGCGTGGACCTCAAGGGAGAGCGGAACTTCCACATCCTGTATCAAC
TGGTCGCTGGCGCTTCAGGGGTGGGCGTGGACCTCAAGCTGGGAGGCGCC
AGCCCGTACAAGATCATTTCGCAGAGCGACTGCACCGCCCTGGACGGTGT
AGACGACGCCGAGGAGTTCAAGAGGGTGAAGGCCGCGTTCGACACTATAG
GGGTAGACGAGGAGTCGCAGATGCAGGTCTGGAAAATGCTGGCGTCGGTG
CTGTACATGTCGAACCTCGAGTTTGACAAGGTGGACCACGAGCAGGGCGA
GATCGCCTCCATTTCTGACCGCGAGGTATGTACATAACTGGGAGGCGCCA
GCCCGTACAAGATCATTTCGCAGAGCGACTGCACCGCCCTGGACGGTGTA
GACGACGCCGAGGAGTTCAAGAGGGTGAAGGCCGCGTTCGACACTATAGG
GGTAGACGAGGAGTCGCAGATGCAGGTCTGGAAAATGCTGGCGTCGGTGC
TGTACATGTCGAACCTCGAGTTTGACAAGGTGGACCACGAGCAGGGCGAG
ATCGCCTCCATTTCTGACCGCGAGGTATGTACATAA
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