mRNA_L-elsbetiae_contig18539.5394.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: D7FPQ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPQ0_ECTSI) HSP 1 Score: 399 bits (1025), Expect = 8.260e-126 Identity = 210/274 (76.64%), Postives = 232/274 (84.67%), Query Frame = 1 Query: 19 GTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGASGVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQVWKMLASVLYMSNLEFDKVDHEQGEIASISDREVCT 840 GTILIAVNPLRRV +PEM++Y++R LN ETPHPYAIAELAYHQMRLGAGR ANQSIVVSGESGAGKTETSKIIL + SVGGVA+LDQKVV+SSPILESFGNAKTLRNNNSSRFGKFLKLQFT+DKYRLAGAF++TYLLEKSRVL QG GERNFHILYQLVAGASGVG+DLKL YKI+SQSDCT LD VDDA EF+ VK AFDTIG+ EESQ+QVW+MLASVL++SN+EFDKVDHEQGEIA+ISDRE + Sbjct: 95 GTILIAVNPLRRVPNPEMTDYMDRSLNPETPHPYAIAELAYHQMRLGAGRKVANQSIVVSGESGAGKTETSKIILTFLTHR-----------------SVGGVASLDQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTKDKYRLAGAFIETYLLEKSRVLTQGKGERNFHILYQLVAGASGVGIDLKLQDVESYKILSQSDCTTLDDVDDAAEFRTVKGAFDTIGMGEESQLQVWQMLASVLHLSNVEFDKVDHEQGEIATISDREALS 351
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: A0A6H5JUQ2_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUQ2_9PHAE) HSP 1 Score: 370 bits (951), Expect = 1.320e-124 Identity = 198/293 (67.58%), Postives = 229/293 (78.16%), Query Frame = 1 Query: 16 QGTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAE------------------LAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGASGVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQVWKMLASVLYMSNLEFDKVDHEQGEIASISDREVCT 840 QGTILIAVNPLRR+ DP++SEY+NR L+ E PHPYAIAE LAYHQMRLG GR AANQSIVVSGESGAGKTETSKIIL + S GGVA+LDQKV++SSPILESFGNAKTLRNNNSSRFGKFLKLQFT+DK+ LAGAF++TYLLEKSRVL G GERNFH+LYQLVAGASG+ ++LKL G YKI+S+ DCTALDGVDDA EF+ V+AAFDTIG+ EESQ+QVW+MLA++L++SNLEF+KVDH+QGEIA ISD E + Sbjct: 91 QGTILIAVNPLRRIPDPDVSEYMNRSLDPEAPHPYAIAEVTFRSVPWSLVISAFPGALAYHQMRLGTGRKAANQSIVVSGESGAGKTETSKIILTFLTHR-----------------SAGGVASLDQKVMDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTKDKHLLAGAFIETYLLEKSRVLTPGMGERNFHVLYQLVAGASGLALNLKLEGVGSYKILSRGDCTALDGVDDANEFRGVRAAFDTIGMSEESQLQVWQMLAAMLHLSNLEFNKVDHQQGEIADISDSETLS 366
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: A0A6H5JRA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA1_9PHAE) HSP 1 Score: 382 bits (981), Expect = 5.880e-120 Identity = 203/274 (74.09%), Postives = 224/274 (81.75%), Query Frame = 1 Query: 19 GTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGASGVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQVWKMLASVLYMSNLEFDKVDHEQGEIASISDREVCT 840 GTILIAVNPL+RV P+M +Y+++ LN ETPHPYAIAELAYHQMRLGAGR ANQSIVVSGESGAGKTETSKIIL SVGG+ANLDQKVV+SSPILESFGNAKTLRNNNSSRFGKFLKLQFT+DKYRLAGAF++TYLLEKSRVL QGTGERNFHILYQLVAGAS + DLKL YKI++QS+C LD +DD EEF VK+AFDTIG+ ESQ QVW+MLASVL+MSNLEFDKVDHEQGEIASISDRE + Sbjct: 109 GTILIAVNPLQRVPSPDMRDYMDKSLNPETPHPYAIAELAYHQMRLGAGRKLANQSIVVSGESGAGKTETSKIILSF-----------------LTRRSVGGIANLDQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTKDKYRLAGAFIETYLLEKSRVLTQGTGERNFHILYQLVAGASALDDDLKLEDVESYKILAQSECVTLDCMDDTEEFATVKSAFDTIGMSAESQAQVWRMLASVLHMSNLEFDKVDHEQGEIASISDREALS 365
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: D8LMS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS5_ECTSI) HSP 1 Score: 381 bits (979), Expect = 4.810e-119 Identity = 204/274 (74.45%), Postives = 223/274 (81.39%), Query Frame = 1 Query: 19 GTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGASGVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQVWKMLASVLYMSNLEFDKVDHEQGEIASISDREVCT 840 GTILIAVNPL+RV P+M +Y+++ LN ETPHPYAIAELAYHQMRLGAGR ANQSIVVSGESGAGKTETSKIIL SVGGVANLDQKVV+SSPILESFGNAKTLRNNNSSRFGKFLKLQFT DKYRLAGAF++TYLLEKSRVL QGTGERNFHILYQLVAGAS + DLKL YKI++QS+C LD +DD EEF VK+AFDTIG+ ESQ QVW+MLASVL+MSNLEFDKVDHEQGEIASISDRE + Sbjct: 109 GTILIAVNPLQRVPSPDMRDYMDKSLNPETPHPYAIAELAYHQMRLGAGRKMANQSIVVSGESGAGKTETSKIILSF-----------------LTRRSVGGVANLDQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTTDKYRLAGAFIETYLLEKSRVLTQGTGERNFHILYQLVAGASALDDDLKLEDVESYKILAQSECVTLDCMDDTEEFGTVKSAFDTIGMSPESQAQVWRMLASVLHMSNLEFDKVDHEQGEIASISDREALS 365
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: D8LHQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ0_ECTSI) HSP 1 Score: 380 bits (977), Expect = 5.750e-119 Identity = 199/274 (72.63%), Postives = 226/274 (82.48%), Query Frame = 1 Query: 19 GTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGASGVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQVWKMLASVLYMSNLEFDKVDHEQGEIASISDREVCT 840 GTILIAVNPLRR+ DP++SEY+NR L+ E PHPYAIAELAYHQMRLG GR AANQSIVVSGESGAGKTETSKIIL + S GGVA+LDQKVV+SSPILESFGNAKTLRNNNSSRFGKFLKLQFT+DK+RLAGAF++TYLLEKSRVL G GERNFH+LYQLVAGAS +G+DLKL G YKI+S DCTALDGVDDA EFK V+AAFDTI + EESQ+QVW+ LA++L++SNLEF+KVDH+QGEIA ISD E + Sbjct: 111 GTILIAVNPLRRIPDPDVSEYMNRSLDPEAPHPYAIAELAYHQMRLGTGRKAANQSIVVSGESGAGKTETSKIILTFLTHR-----------------SAGGVASLDQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKLQFTKDKHRLAGAFIETYLLEKSRVLTPGMGERNFHVLYQLVAGASDLGLDLKLEGVGSYKILSHGDCTALDGVDDANEFKGVRAAFDTIRMSEESQLQVWQTLAAMLHLSNLEFNKVDHQQGEIADISDSETLS 367
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: D7G4Q7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q7_ECTSI) HSP 1 Score: 369 bits (947), Expect = 1.740e-114 Identity = 193/272 (70.96%), Postives = 224/272 (82.35%), Query Frame = 1 Query: 19 GTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAG--ASGVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQVWKMLASVLYMSNLEFDKVDHEQGEIASISDR 828 GTILIAVNPLR+V+DPEMS+Y+NR L+ E PHPYAIAEL+YHQMRLG GR AANQSIVVSGESGAGKTETSKIILR + SVGGV L+QKVV+SSPILESFGNAKTLRNNNSSRFGKFLK+QFT+DKYRLAGAF++TYLLEKSRVL QG GERNFHILY+LVAG ASG+ +LKLG A YKI+ ++ C LDGVDD ++F+ V+ AFDTIG+D+++Q+QVWK LA+VL+MSNL FDK D EQGEIA+ISDR Sbjct: 117 GTILIAVNPLRKVADPEMSKYMNRSLDPEAPHPYAIAELSYHQMRLGGGRKAANQSIVVSGESGAGKTETSKIILRFLTHR-----------------SVGGVTGLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTKDKYRLAGAFIETYLLEKSRVLTQGKGERNFHILYELVAGGAASGLATELKLGSAETYKILGENGCITLDGVDDVKQFQNVQKAFDTIGMDKDTQLQVWKALAAVLHMSNLRFDKADSEQGEIAAISDR 371
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: A0A6H5JLA2_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA2_9PHAE) HSP 1 Score: 339 bits (869), Expect = 1.750e-110 Identity = 182/289 (62.98%), Postives = 219/289 (75.78%), Query Frame = 1 Query: 16 QGTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGA--SGVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQV-----------------WKMLASVLYMSNLEFDKVDHEQGEIASISD 825 QGT+LIAVNPLRR+ DP M ++NRPLN ETPHPYAIAEL+YHQMRLGAGR AANQSI+VSGESGAGKTE+SKIIL+ + +G + R SVGGV +L+QKVV+SSPILESFGNAKT+RNNNSSRFGKFLK+QFT DKYRLAGAF++TYLLEKSRVL Q GERNFHILY+LV GA SG+ DL+L G Y+++S S CT L+GVDDA F+ V+ A TIG+DE++QMQV WK LA+VL+MSN+ F+ D QGE+A++ D Sbjct: 4 QGTVLIAVNPLRRLEDPPMESFMNRPLNPETPHPYAIAELSYHQMRLGAGRKAANQSIIVSGESGAGKTESSKIILKRDNSAAVKKGFLTHR-------SVGGVTSLEQKVVDSSPILESFGNAKTMRNNNSSRFGKFLKMQFTRDKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLAKDLQLQGVEAYRVLSASGCTELEGVDDAAHFEEVRTACRTIGLDEDTQMQVRRRRGRWLVYVCDEQMVWKALAAVLHMSNVTFEGKDDAQGEVAAVKD 285
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: A0A836C8E2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8E2_9STRA) HSP 1 Score: 293 bits (751), Expect = 4.280e-87 Identity = 162/271 (59.78%), Postives = 199/271 (73.43%), Query Frame = 1 Query: 10 SHQGTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGAS-GVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQVWKMLASVLYMSNLEFDKVDHEQGEIASI 819 ++ GTILI VNPLR V DP MSE+++ L+ E PHPYAIAELAYHQM+LG+G NQSIVVSGESGAGKTETSKII++ + KG GV LDQ+V+ESSPILESFGNAKTLRN NSSRFGKFLKLQFT+D LAG +++TYLLEKSRVL+Q GERNFHILY+LVAGA + L LG A Y I+SQ C ALDGVDDA +F+ V AF T+G+D +Q QVW++LA+VL+++ L FD + +GE+A++ Sbjct: 98 TYMGTILICVNPLRTVPDPPMSEFLDVSLDPEKPHPYAIAELAYHQMKLGSG-GCTNQSIVVSGESGAGKTETSKIIIKYLAHRTKG-----------------GVGGLDQRVIESSPILESFGNAKTLRNANSSRFGKFLKLQFTKDTAALAGGYMETYLLEKSRVLSQARGERNFHILYELVAGADPALKRQLGLGSAQDYHILSQGGCIALDGVDDAAQFRDVVHAFGTVGLDAATQGQVWRLLAAVLHVACLAFDVEETAEGEVAAV 350
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: A0A836C7J1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7J1_9STRA) HSP 1 Score: 282 bits (721), Expect = 9.460e-84 Identity = 157/272 (57.72%), Postives = 193/272 (70.96%), Query Frame = 1 Query: 19 GTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGAS-GVGVDLKLGGASPYKIISQSDCTALDGVDDAEEFKRVKAAFDTIGVDEESQMQVWKMLASVLYMSNLEFDKVDHEQGEIASISDRE 831 GT+LI VNPL+ V DP M YV + L+ E PHPYAIAELAYHQM+LG G NQS+VVSGESGAGKTETSKII++ A + GGV LD +V+ESSPILESFGNAKTLRN NSSRFGKFLKLQFT D LAG F++TYLLEKSRVL+Q ERNFHILY+LVAGA + L LG A Y I+ QS CT L+GVDDAE+F+ V AF+T+G+ E Q QVW+MLA+VL+ + ++F + +GE+A++ ++ Sbjct: 117 GTLLICVNPLQVVPDPPMETYVGQQLDPEAPHPYAIAELAYHQMKLGTG-GLTNQSVVVSGESGAGKTETSKIIIKY-----------------LAHRTQGGVGGLDNRVIESSPILESFGNAKTLRNANSSRFGKFLKLQFTADTAALAGGFMETYLLEKSRVLSQAQNERNFHILYELVAGADPALKKRLGLGSAKDYHILFQSGCTTLEGVDDAEQFRGVVHAFNTVGLTAEVQEQVWRMLAAVLHTACMKFAAEETAEGEVATVPQKD 370
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Match: D8LMW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW4_ECTSI) HSP 1 Score: 264 bits (674), Expect = 7.910e-77 Identity = 142/217 (65.44%), Postives = 163/217 (75.12%), Query Frame = 1 Query: 19 GTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMRLGAGRNAANQSIVVSGESGAGKTETSKIILRIGRYSGKGRGAVRFRLISAAVGSVGGVANLDQKVVESSPILESFGNAKTLRNNNSSRFGKFLKLQFTEDKYRLAGAFVDTYLLEKSRVLAQGTGERNFHILYQLVAGASGVGVDLKLGGASPYKIISQSDCTALDGVDDAE 669 GT+LIAVNPLRR+ DP M ++NRPLN ETPHPYAIAEL+YHQMRLGAGR AANQSI+VSGESGAGKTE+SKIIL+ + SVGGV +L+QKVV+SSPILESFGNAKTLRNNNSSRFGKFLK+QFT DKYRLAGAF++TYLLEKSRVL Q GERNFHILY+LV GA+ G+ L + A +G DDA+ Sbjct: 101 GTVLIAVNPLRRLEDPPMESFMNRPLNPETPHPYAIAELSYHQMRLGAGRKAANQSIIVSGESGAGKTESSKIILKFLTHR-----------------SVGGVTSLEQKVVDSSPILESFGNAKTLRNNNSSRFGKFLKMQFTRDKYRLAGAFIETYLLEKSRVLTQCKGERNFHILYELVKGAAKSGLSKDLQVWKTLAAVLHMSNVAFEGKDDAQ 300 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18539.5394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig18539.5394.1 >prot_L-elsbetiae_contig18539.5394.1 ID=prot_L-elsbetiae_contig18539.5394.1|Name=mRNA_L-elsbetiae_contig18539.5394.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=281bp LLTSHQGTILIAVNPLRRVSDPEMSEYVNRPLNSETPHPYAIAELAYHQMback to top mRNA from alignment at L-elsbetiae_contig18539:48..1883+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig18539.5394.1 ID=mRNA_L-elsbetiae_contig18539.5394.1|Name=mRNA_L-elsbetiae_contig18539.5394.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1836bp|location=Sequence derived from alignment at L-elsbetiae_contig18539:48..1883+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig18539:48..1883+ >mRNA_L-elsbetiae_contig18539.5394.1 ID=mRNA_L-elsbetiae_contig18539.5394.1|Name=mRNA_L-elsbetiae_contig18539.5394.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1686bp|location=Sequence derived from alignment at L-elsbetiae_contig18539:48..1883+ (Laminarionema elsbetiae ELsaHSoW15)back to top |