mRNA_L-elsbetiae_contig18512.5385.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig18512.5385.1
Unique NamemRNA_L-elsbetiae_contig18512.5385.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig18512.5385.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 458 bits (1178), Expect = 8.570e-144
Identity = 231/316 (73.10%), Postives = 269/316 (85.13%), Query Frame = 1
Query:    1 MLVVPHTGRMVEDFNEPGVMIAAYFDLFPHGLGGHIDKRARTLTFTKWARILLRRRDARFRKHRTFVFCMAAIIFRREAISSAHWKLTGRVSRNEAKLLAQITGDDLLSVAKEMEGGSSAREAFANRPAARKLIESMHSVMSGASWTIFNKKSTRMLAISYIVQMGQPLFWMTINPADKNSPIVMKLAGVDLDVNSKLKADLTKYVERLQLIASDPVASADFYHITIDAVLETLLLRFGAKYGDGGVLGRIKAYIGMTEEQKRLTLHCHLLVWVYGFNDFASLRELMDKTPGSYQELATFLSRTIFSQIASEEDVR 948
            MLV+PHTG+MVEDFNEPGVMIAAYFDLFPHG+GGH+DKR R L FTKWAR LLRRRD RFRK+RTFVFC+AAIIFRREAIS+AHWKLTGRVSR  A+ L  IT DDLL+VA+E+EGG+S  +A ANRPAAR+LI +M SV   ASWT+FNK++ RM AIS I+Q+GQPLFWMTINPAD NSP+VMKLAGVDLDV+S+LK DL +YV+RLQLIA+DPVASA+F+H+ IDAV++TLL RFGAK GDGGVLGR+KAY+GMTEEQ+RLTLHCHLLVWVY                   QELA+FLSRTIFSQ+AS+EDV+
Sbjct: 2607 MLVLPHTGKMVEDFNEPGVMIAAYFDLFPHGVGGHLDKRQRPLNFTKWARCLLRRRDPRFRKNRTFVFCLAAIIFRREAISNAHWKLTGRVSRGVAQELDGITPDDLLAVAREIEGGTSTAKALANRPAARQLIRTMQSVNGDASWTMFNKRTLRMKAISMIIQLGQPLFWMTINPADSNSPVVMKLAGVDLDVSSRLKTDLPQYVKRLQLIAADPVASAEFFHVMIDAVMKTLL-RFGAKDGDGGVLGRVKAYVGMTEEQRRLTLHCHLLVWVY-------------------QELASFLSRTIFSQVASDEDVQ 2902          
BLAST of mRNA_L-elsbetiae_contig18512.5385.1 vs. uniprot
Match: A0A6H5K8N9_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N9_9PHAE)

HSP 1 Score: 433 bits (1114), Expect = 7.790e-140
Identity = 212/314 (67.52%), Postives = 257/314 (81.85%), Query Frame = 1
Query:    4 LVVPHTGRMVEDFNEPGVMIAAYFDLFPHGLGGHIDKRARTLTFTKWARILLRRRDARFRKHRTFVFCMAAIIFRREAISSAHWKLTGRVSRNEAKLLAQITGDDLLSVAKEMEGGSSAREAFANRPAARKLIESMHSVMSGASWTIFNKKSTRMLAISYIVQMGQPLFWMTINPADKNSPIVMKLAGVDLDVNSKLKADLTKYVERLQLIASDPVASADFYHITIDAVLETLLLRFGAKYGDGGVLGRIKAYIGMTEEQKRLTLHCHLLVWVYGFNDFASLRELMDKTPGSYQELATFLSRTIFSQIASEEDV 945
            LV+ H+G+MV DF+ PG+ + AYFDLFPHG+GGH+DKR R L   +WA+ILLRRRDARFRK RTF++C+ A+IFRREAIS+A WKL GRV R+ A  +A +T  DL +VA EME GSS   A A+RP  R LI++M  V +GASWTI+NK+STRM+AIS+I+QMGQPLFW+TINPAD NSPIVM LAGV+LDV S+LKAD   Y ++L+ +A+DPVASADF+H TIDAVL T LLRFGA  GDGGVLGR+K Y+GMTEEQKRLTLHCHLLVWVYG+NDFAS RELMDKTP  Y ELA +L + IF+QIA+  D+
Sbjct:  401 LVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIAGVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMEFVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVL-TCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDI 713          
BLAST of mRNA_L-elsbetiae_contig18512.5385.1 vs. uniprot
Match: A0A6H5L0L4_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L4_9PHAE)

HSP 1 Score: 437 bits (1123), Expect = 2.220e-138
Identity = 213/314 (67.83%), Postives = 259/314 (82.48%), Query Frame = 1
Query:    4 LVVPHTGRMVEDFNEPGVMIAAYFDLFPHGLGGHIDKRARTLTFTKWARILLRRRDARFRKHRTFVFCMAAIIFRREAISSAHWKLTGRVSRNEAKLLAQITGDDLLSVAKEMEGGSSAREAFANRPAARKLIESMHSVMSGASWTIFNKKSTRMLAISYIVQMGQPLFWMTINPADKNSPIVMKLAGVDLDVNSKLKADLTKYVERLQLIASDPVASADFYHITIDAVLETLLLRFGAKYGDGGVLGRIKAYIGMTEEQKRLTLHCHLLVWVYGFNDFASLRELMDKTPGSYQELATFLSRTIFSQIASEEDV 945
            LV+ H+G+MV DF+ PG+ + AYFDLFPHG+GGH+DKR R L   +WA+ILLRRRDARFRK RTF++C+ A+IFRREAIS+A WKL GRV R+ A  +A++T  DL +VA EME GSS   A A+RP  R LI++M SV +GASWTI+NK+STRM+AIS+I+QMGQPLFW+TINPAD NSPIVM LAGV+LDV S+LKAD   Y ++L+ +A+DPVASADF+H TIDAVL T LLRFGA  GDGGVLGR+K Y+GMTEEQKRLTLHCHLLVWVYG+NDFAS RELMDKTP  Y ELA +L + IF+QIA+  D+
Sbjct:  481 LVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIARVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVL-TCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDI 793          
BLAST of mRNA_L-elsbetiae_contig18512.5385.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE)

HSP 1 Score: 403 bits (1035), Expect = 1.300e-124
Identity = 202/317 (63.72%), Postives = 244/317 (76.97%), Query Frame = 1
Query:    4 LVVPHTGRMVEDFNEPGVMIAAYFDLFPHGLGGHIDKRARTLTFTKWARILLRRRDARFRKHRTFVFCMAAIIFRREAISSAHWKLTGRVSRNEAKLLAQITGDDLLSVAKEMEGG---SSAREAFANRPAARKLIESMHSVMSGASWTIFNKKSTRMLAISYIVQMGQPLFWMTINPADKNSPIVMKLAGVDLDVNSKLKADLTKYVERLQLIASDPVASADFYHITIDAVLETLLLRFGAKYGDGGVLGRIKAYIGMTEEQKRLTLHCHLLVWVYGFNDFASLRELMDKTPGSYQELATFLSRTIFSQIASEEDV 945
            +V+ H+G++V DF+EPG+ IAA++DLFPHG+GG +DKR R+LTF +WARILL+RRD RFRKHRTF+FC+ A+IFRREAI +A +KL G +S   A LLA++T  DL   A EMEG    SS  E        R LI  M SV SGASWTI NK+ TRM+AISY++QMGQPL W+TI+PAD NSPIVMKLAGVD+DV SKLK+D   Y E+L+L+ASDPVASA FYH TI  VL T LLRFGA  GDGGVLGR+K Y+GMTEEQKRL LH HLLVW+YG+NDF S R LMDKTP  Y ELA +L   +F+QIA+  D+
Sbjct:  549 MVLTHSGKLVSDFSEPGLFIAAFYDLFPHGVGGPLDKRRRSLTFKRWARILLKRRDPRFRKHRTFLFCVCALIFRREAIENARFKLRGNISTRIASLLAKVTPADLSQAAAEMEGSFDFSSLNEGI------RSLIRMMESVSSGASWTIHNKRCTRMIAISYMIQMGQPLIWLTISPADHNSPIVMKLAGVDIDVTSKLKSDFPDYTEKLRLVASDPVASAQFYHNTIQGVL-TCLLRFGASDGDGGVLGRVKGYVGMTEEQKRLMLHAHLLVWIYGYNDFVSFRALMDKTPRRYTELARYLDNIVFNQIATLADI 858          
BLAST of mRNA_L-elsbetiae_contig18512.5385.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE)

HSP 1 Score: 343 bits (880), Expect = 3.920e-104
Identity = 176/302 (58.28%), Postives = 222/302 (73.51%), Query Frame = 1
Query:   40 FNEPGVMIAAYFDLFPHGLGGHIDKRARTLTFTKWARILLRRRDARFRKHRTFVFCMAAIIFRREAISSAHWKLTGRVSRNEAKLLAQITGDDLLSVAKEMEGGSSAREAFANRPAARKLIESMHSVMSGASWTIFNKKSTRMLAISYIVQMGQPLFWMTINPADKNSPIVMKLAGVDLDVNSKLKADLTKYVERLQLIASDPVASADFYHITIDAVLETLLLRFGAKYGDGGVLGRIKAYIGMTEEQKRLTLHCHLLVWVYGFNDFASLRELMDKTPGSYQELATFLSRTIFSQIASEEDV 945
            F + G+ +AA+FDLFPHG+GGH+D+R R ++F +WA+ILLR+RD RFRKH++F+FC+ A+IFRREAI +A WKLTGR+SR  A+ LA IT +DL + AKEME GSS   A ANR A R L+ +M SV +G+SWTI+NK+STRM+AIS I+Q+GQPL+WMTI PAD  SPI                        RL+L+ASDPVASA  YH   DAVL T LLRF A+ GDGGVL R+K Y+GMT+EQ+RL LH H+LVWVYGFNDF+S R+LMDK P  Y +LA FL R IF+Q+ S  +V
Sbjct:  230 FYDEGLFVAAFFDLFPHGIGGHLDERRRYMSFQEWAKILLRQRDPRFRKHKSFLFCVWALIFRREAIKNARWKLTGRMSRRTAETLATITPEDLAAAAKEMEQGSSVWSALANRNAVRTLLTTMESVHAGSSWTIYNKRSTRMIAISLIMQIGQPLWWMTIGPADTKSPI------------------------RLRLVASDPVASALLYHSVTDAVL-TCLLRFDARDGDGGVLERVKGYLGMTKEQRRLMLHFHVLVWVYGFNDFSSFRDLMDKRPEKYNKLARFLERVIFNQVVSFANV 506          
BLAST of mRNA_L-elsbetiae_contig18512.5385.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 2.820e-92
Identity = 159/313 (50.80%), Postives = 209/313 (66.77%), Query Frame = 1
Query:    4 LVVPHTGRMVEDFNEPGVMIAAYFDLFPHGLGGHIDKRARTLTFTKWARILLRRRDARFRKHRTFVFCMAAIIFRREAISSAHWKLTGRVSRNEAKLLAQITGDDLLSVAKEMEGGSSAREAFANRPAARKLIESMHSVMSGASWTIFNKKSTRMLAISYIVQMGQPLFWMTINPADKNSPIVMKLAGVDLDVNSKLKADLTKYVERLQLIASDPVASADFYHITIDAVLETLLLRFGAKYGDGGVLGRIKAYIGMTEEQKRLTLHCHLLVWVYGFNDFASLRELMDKTPGSYQELATFLSRTIFSQIASEED 942
            +VV HTG MV DF + G+ + AYF+LF HG+GGH+D R R ++  +WA+I LRRRD RF K +TF FC+ A+ FRREA ++A WK+ G +  + A+ LA I+ +D+ + AKE+E G+ + ++F                                     I+QMGQPL+WMT +PAD NSPIV++LAGV +DV S+LK+D   YVERL+L+A D V SA FYH    AVL T  LRFGA  GDGGVLGR+KA +GMTEEQ+RL LHCHLLVWVYG+NDF+  RELMDK+P  Y +LA FL + IF+Q+A+  D
Sbjct:  527 MVVTHTGNMVSDFYDEGLFVVAYFNLFSHGIGGHLDVRRRPVSCKEWAQIFLRRRDGRFSKDKTFWFCVCALTFRREATNNARWKIKGGMPSDAAETLASISPEDIPAAAKELEQGTGSCDSF-------------------------------------IMQMGQPLWWMTFSPADTNSPIVLQLAGVTIDVTSRLKSDFPDYVERLRLVACDHVTSAFFYHSVTKAVL-TCWLRFGATDGDGGVLGRVKACVGMTEEQRRLMLHCHLLVWVYGYNDFSIFRELMDKSPEKYNKLARFLEQVIFNQVATLTD 801          
BLAST of mRNA_L-elsbetiae_contig18512.5385.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 1.600e-88
Identity = 145/238 (60.92%), Postives = 185/238 (77.73%), Query Frame = 1
Query:  232 EAISSAHWKLTGRVSRNEAKLLAQITGDDLLSVAKEMEGGSSAREAFANRPAARKLIESMHSVMSGASWTIFNKKSTRMLAISYIVQMGQPLFWMTINPADKNSPIVMKLAGVDLDVNSKLKADLTKYVERLQLIASDPVASADFYHITIDAVLETLLLRFGAKYGDGGVLGRIKAYIGMTEEQKRLTLHCHLLVWVYGFNDFASLRELMDKTPGSYQELATFLSRTIFSQIASEEDV 945
            EAI +A WKLTGR+S  +++ L+ +T +DL   A  ME G       ++R     LI++M SV +GASWT  NK+STRM+AISYI+QMGQPL WMTINPAD NSPIV+K+ GVD+DV+SKLKA+   YV++L+L+A+DPVASADF+H TID VL + LLRFGA  GDGG+LGR+K Y+GMTEEQKRL LHCHLLVWV+G+NDFAS R+LMD+TP  Y ELA +L   IF+Q+A+  D+
Sbjct:  558 EAIENARWKLTGRISPADSRTLSAVTPEDLADAAAAMENGRGNGSVLSDRAGIAALIKTMESVHAGASWTPHNKRSTRMIAISYIMQMGQPLIWMTINPADVNSPIVVKMCGVDIDVSSKLKANFPDYVDKLRLVANDPVASADFFHNTIDGVL-SCLLRFGASDGDGGILGRVKGYVGMTEEQKRLVLHCHLLVWVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATLADI 794          
BLAST of mRNA_L-elsbetiae_contig18512.5385.1 vs. uniprot
Match: A0A6H5K657_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K657_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 1.780e-70
Identity = 129/298 (43.29%), Postives = 182/298 (61.07%), Query Frame = 1
Query:    4 LVVPHTGRMVEDFNEPGVMIAAYFDLFPHGLGGHI-DKRARTLTFTKWARILLRRRDARFRKHRTFVFCMAAIIFRREAISSAHWKLTGRVSRNEAKLLAQITGDDLLSVAKEMEGGSSAREAFANRPAARKLIESMHSVMSGASWTIFNKKSTRMLAISYIVQMGQPLFWMTINPADKNSPIVMKLAGVDLDVNSKLKADLTKYVERLQLIASDPVASADFYHITIDAVLETLLLRFGAKYGDGGVLGRIKAYIGMTEEQKRLTLHCHLLVWVYGFNDFASLRELMDKTPGSYQELA 894
            LVVPH G +++D N     +      FP G G  +   R R ++F +W +ILL RRD+ +R  R F+FC+AAI FR EA+++  +KL+ + +   A  +A IT + L ++A+E++ G        NRP  R L+ +M +V   A+WT   K   R  A S  +  GQP FWMT+NP+D NSP VM   G D++++S     +  + +RL +I +DPVASA F+H TI+AVL+  +LRF A  GDGG LG IKAYIGMTEEQ RL LH HL+VWV+GF     LR+ +  +   + ELA
Sbjct:  216 LVVPH-GEILDDCNNNSAWVEGVMHAFPEGCGSPLCPTRKRLVSFNRWIQILLNRRDSSWRIDRCFLFCVAAIRFRHEALANVRFKLSVQPNSANADAIASITKEHLHAMAEELKSGKKTSAVLNNRPEIRSLLRTMQAVSGDATWTDHGKHRARTTAHSMFILFGQPFFWMTVNPSDLNSPFVMHYGGHDINLSSTCHEQMPDFRKRLDIIVNDPVASAIFFHETIEAVLK-YILRFQANDGDGGPLGNIKAYIGMTEEQHRLMLHGHLMVWVHGFTSREQLRQDVGYSLKKHAELA 511          
BLAST of mRNA_L-elsbetiae_contig18512.5385.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 1.850e-66
Identity = 125/268 (46.64%), Postives = 173/268 (64.55%), Query Frame = 1
Query:  142 WARILLRRRDARFRKHRTFVFCMAAIIFRREAISSAHWKLTGRVSRNEAKLLAQITGDDLLSVAKEMEGGSSAREAFANRPAARKLIESMHSVMSGASWTIFNKKSTRMLAISYIVQMGQPLFWMTINPADKNSPIVMKLAGVDLDVNSKLKADLTKYVERLQLIASDPVASADFYHITIDAVLETLLLRFGAKYGDGGVLGRIKAYIGMTEEQKRLTLHCHLLVWVYGFNDFASLRELMDKTPGSYQELATFLSRTIFSQIASEEDV 945
            W +ILL RRD+ +R  R F+FC AAI FR EAI++  +KL+ + +   A  +A IT + L ++A+E++ G     AF NRP  R L+ +M +V   A+WT   K   R  A S  +  GQP FWMT+NP+D NSP VM   G D+D++S     +  + +RL +I +DPVASA F+H TI+AVL+  +LRF A YGDGG LG IKAYIGMTEEQ RL LH HL+VWV+GF     LR+ +  +   + ELA ++ R I++Q+ S E+V
Sbjct:  306 WIQILLNRRDSSWRIDRCFLFCAAAIRFRHEAIANMRFKLSVQPNSANADAIASITKEHLHAMAEELKSGKKTSAAFNNRPEIRSLLRTMQAVSGDATWTDHGKHRARTTAHSMSMLFGQPFFWMTVNPSDLNSPFVMHYGGHDIDLSSTCHEQMPDFRKRLDIIVNDPVASAIFFHGTIEAVLK-YILRFQANYGDGGALGNIKAYIGMTEEQHRLMLHGHLMVWVHGFTSREQLRQGVGYSLKKHAELAKYIGRIIYNQVMSVEEV 572          
BLAST of mRNA_L-elsbetiae_contig18512.5385.1 vs. uniprot
Match: A0A6H5K355_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K355_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 1.380e-63
Identity = 134/324 (41.36%), Postives = 180/324 (55.56%), Query Frame = 1
Query:    4 LVVPHTGRMVEDFNEPGVMIAAYFDLFPHGLGGHI-DKRARTLTFTKWARILLRRRDARFRKHRTFVFCMAAIIFRREAISSAHWKLTGRVSRNEAKLLAQITGDDLLSVAKEMEGGSSAREAFANRPAARKLIESMHSVMSGASWTIFNKKSTRMLAISYIVQMGQPLFWMTINPADKNSPIVMKLAGVDLDVNSKLKADLTKYVERLQLIASDPVASADFYHITIDAVLETLLLRFGAKYGDGGVLGRIKAYIGMTEEQKRLTLHCHLLVWVYGFNDFASLRELMDKTPGSY---------QELATFLSRTIFSQIASEEDV 945
            LVVPH G +++D N     +  +   FP G GG +   R   ++F +W +ILL R D  +R  R F+ C AAI FR EAIS+  +KL+ R +  +A  +A IT +DL  +A E++ G        NRP  R L     +V   A+WT   K      A S  +Q G P FWMT NP+D NSP VM+                 +Y +RL +  +DPVASA F+H T++AV++  +LRFGAK GDGG LG IKAYIGMTEEQ RL LH HL+VWV+GF      REL D    S          QE+  ++ R I++Q+ S E+V
Sbjct:  169 LVVPH-GEILDDSNNNSAWVEGFMHAFPGGCGGPLCPTRRNPVSFNRWIQILLNRGDIAWRVDRCFLCCAAAIRFRHEAISNVRFKLSVRPNSTDANAIASITKEDLHGMADELKSGKRTSALKNNRPEIRALFRKTQAVSGDATWTDHGKHRVLATAHSMFIQFGLPFFWMTANPSDVNSPCVMQCG---------------EYRKRLDITVNDPVASATFFHETMEAVVK-YILRFGAKDGDGGALGNIKAYIGMTEEQHRLMLHGHLMVWVHGFTS----RELRDDIGRSLKKHAKLARVQEVLYYIGRLIYNQVMSLEEV 471          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18512.5385.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTA2_9PHAE8.570e-14473.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8N9_9PHAE7.790e-14067.52Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5L0L4_9PHAE2.220e-13867.83Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5KIB1_9PHAE1.300e-12463.72ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K882_9PHAE3.920e-10458.28ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JN07_9PHAE2.820e-9250.80ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
D7G3U9_ECTSI1.600e-8860.92ATP-dependent DNA helicase n=2 Tax=Ectocarpus sili... [more]
A0A6H5K657_9PHAE1.780e-7043.29Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5K1H7_9PHAE1.850e-6646.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K355_9PHAE1.380e-6341.36Helitron_like_N domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18512contigL-elsbetiae_contig18512:459..1406 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score401.7
Seed ortholog evalue3.1e-109
Seed eggNOG ortholog2880.D7FSK0
KEGG koko:K15255,ko:K20647
Hectar predicted targeting categoryother localisation
EggNOG free text desc.G-quadruplex DNA unwinding
EggNOG OGsCOG0507@1,KOG0987@2759
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-02_001360.1
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03029,ko03032,ko04131
Exons1
Model size948
Cds size948
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815771.518128-CDS-L-elsbetiae_contig18512:458..14061622815771.518128-CDS-L-elsbetiae_contig18512:458..1406Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18512 459..1406 +
1691683091.8398027-CDS-L-elsbetiae_contig18512:458..14061691683091.8398027-CDS-L-elsbetiae_contig18512:458..1406Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig18512 459..1406 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18512.5385.1prot_L-elsbetiae_contig18512.5385.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig18512 459..1406 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig18512.5385.1

>prot_L-elsbetiae_contig18512.5385.1 ID=prot_L-elsbetiae_contig18512.5385.1|Name=mRNA_L-elsbetiae_contig18512.5385.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=316bp
MLVVPHTGRMVEDFNEPGVMIAAYFDLFPHGLGGHIDKRARTLTFTKWAR
ILLRRRDARFRKHRTFVFCMAAIIFRREAISSAHWKLTGRVSRNEAKLLA
QITGDDLLSVAKEMEGGSSAREAFANRPAARKLIESMHSVMSGASWTIFN
KKSTRMLAISYIVQMGQPLFWMTINPADKNSPIVMKLAGVDLDVNSKLKA
DLTKYVERLQLIASDPVASADFYHITIDAVLETLLLRFGAKYGDGGVLGR
IKAYIGMTEEQKRLTLHCHLLVWVYGFNDFASLRELMDKTPGSYQELATF
LSRTIFSQIASEEDVR
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mRNA from alignment at L-elsbetiae_contig18512:459..1406+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig18512.5385.1 ID=mRNA_L-elsbetiae_contig18512.5385.1|Name=mRNA_L-elsbetiae_contig18512.5385.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=948bp|location=Sequence derived from alignment at L-elsbetiae_contig18512:459..1406+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGGTTGTGCCTCATACCGGTCGTATGGTGGAGGATTTTAACGAACC TGGTGTAATGATCGCGGCGTATTTCGACCTTTTCCCGCATGGTCTCGGTG GTCATATAGATAAGCGTGCACGGACGCTTACATTTACCAAGTGGGCGAGG ATTCTCCTGAGACGACGAGATGCAAGATTCAGGAAACACAGGACCTTTGT TTTTTGCATGGCTGCGATCATCTTTCGACGGGAGGCGATATCCAGCGCCC ATTGGAAACTTACCGGGCGGGTGTCACGCAACGAGGCAAAGCTTTTGGCC CAAATAACAGGGGATGATCTGCTCTCTGTTGCGAAAGAGATGGAGGGTGG TTCATCTGCCCGCGAAGCATTCGCCAATCGTCCTGCTGCCCGAAAACTAA TCGAATCAATGCACTCCGTCATGAGCGGGGCTTCCTGGACAATTTTCAAC AAAAAATCAACCCGCATGCTGGCAATCTCCTACATAGTACAAATGGGACA ACCCCTTTTTTGGATGACGATTAACCCCGCGGACAAAAACAGTCCGATCG TCATGAAGCTAGCAGGCGTTGATCTGGATGTGAATAGTAAGCTCAAGGCT GATCTTACCAAGTACGTCGAAAGACTTCAACTCATCGCTTCCGATCCTGT TGCTTCCGCTGACTTCTATCACATCACAATCGACGCGGTGCTAGAAACAT TACTACTGCGTTTCGGTGCTAAATACGGCGACGGTGGGGTGCTGGGAAGG ATCAAGGCTTACATCGGCATGACAGAAGAGCAAAAGAGGCTGACCCTTCA TTGCCACTTGCTTGTCTGGGTTTATGGCTTCAACGACTTTGCAAGCTTGC GCGAATTAATGGATAAGACCCCAGGAAGCTACCAGGAGCTTGCAACCTTC TTAAGCCGGACAATTTTCTCCCAAATTGCATCTGAAGAGGATGTGAGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig18512:459..1406+

>mRNA_L-elsbetiae_contig18512.5385.1 ID=mRNA_L-elsbetiae_contig18512.5385.1|Name=mRNA_L-elsbetiae_contig18512.5385.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1896bp|location=Sequence derived from alignment at L-elsbetiae_contig18512:459..1406+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTGGTTGTGCCTCATACCGGTCGTATGGTGGAGGATTTTAACGAACC
TGGTGTAATGATCGCGGCGTATTTCGACCTTTTCCCGCATGGTCTCGGTG
GTCATATAGATAAGCGTGCACGGACGCTTACATTTACCAAGTGGGCGAGG
ATTCTCCTGAGACGACGAGATGCAAGATTCAGGAAACACAGGACCTTTGT
TTTTTGCATGGCTGCGATCATCTTTCGACGGGAGGCGATATCCAGCGCCC
ATTGGAAACTTACCGGGCGGGTGTCACGCAACGAGGCAAAGCTTTTGGCC
CAAATAACAGGGGATGATCTGCTCTCTGTTGCGAAAGAGATGGAGGGTGG
TTCATCTGCCCGCGAAGCATTCGCCAATCGTCCTGCTGCCCGAAAACTAA
TCGAATCAATGCACTCCGTCATGAGCGGGGCTTCCTGGACAATTTTCAAC
AAAAAATCAACCCGCATGCTGGCAATCTCCTACATAGTACAAATGGGACA
ACCCCTTTTTTGGATGACGATTAACCCCGCGGACAAAAACAGTCCGATCG
TCATGAAGCTAGCAGGCGTTGATCTGGATGTGAATAGTAAGCTCAAGGCT
GATCTTACCAAGTACGTCGAAAGACTTCAACTCATCGCTTCCGATCCTGT
TGCTTCCGCTGACTTCTATCACATCACAATCGACGCGGTGCTAGAAACAT
TACTACTGCGTTTCGGTGCTAAATACGGCGACGGTGGGGTGCTGGGAAGG
ATCAAGGCTTACATCGGCATGACAGAAGAGCAAAAGAGGCTGACCCTTCA
TTGCCACTTGCTTGTCTGGGTTTATGGCTTCAACGACTTTGCAAGCTTGC
GCGAATTAATGGATAAGACCCCAGGAAGCTACCAGGAGCTTGCAACCTTC
TTAAGCCGGACAATTTTCTCCCAAATTGCATCTGAAGAGGATGTGAGGAT
GCTGGTTGTGCCTCATACCGGTCGTATGGTGGAGGATTTTAACGAACCTG
GTGTAATGATCGCGGCGTATTTCGACCTTTTCCCGCATGGTCTCGGTGGT
CATATAGATAAGCGTGCACGGACGCTTACATTTACCAAGTGGGCGAGGAT
TCTCCTGAGACGACGAGATGCAAGATTCAGGAAACACAGGACCTTTGTTT
TTTGCATGGCTGCGATCATCTTTCGACGGGAGGCGATATCCAGCGCCCAT
TGGAAACTTACCGGGCGGGTGTCACGCAACGAGGCAAAGCTTTTGGCCCA
AATAACAGGGGATGATCTGCTCTCTGTTGCGAAAGAGATGGAGGGTGGTT
CATCTGCCCGCGAAGCATTCGCCAATCGTCCTGCTGCCCGAAAACTAATC
GAATCAATGCACTCCGTCATGAGCGGGGCTTCCTGGACAATTTTCAACAA
AAAATCAACCCGCATGCTGGCAATCTCCTACATAGTACAAATGGGACAAC
CCCTTTTTTGGATGACGATTAACCCCGCGGACAAAAACAGTCCGATCGTC
ATGAAGCTAGCAGGCGTTGATCTGGATGTGAATAGTAAGCTCAAGGCTGA
TCTTACCAAGTACGTCGAAAGACTTCAACTCATCGCTTCCGATCCTGTTG
CTTCCGCTGACTTCTATCACATCACAATCGACGCGGTGCTAGAAACATTA
CTACTGCGTTTCGGTGCTAAATACGGCGACGGTGGGGTGCTGGGAAGGAT
CAAGGCTTACATCGGCATGACAGAAGAGCAAAAGAGGCTGACCCTTCATT
GCCACTTGCTTGTCTGGGTTTATGGCTTCAACGACTTTGCAAGCTTGCGC
GAATTAATGGATAAGACCCCAGGAAGCTACCAGGAGCTTGCAACCTTCTT
AAGCCGGACAATTTTCTCCCAAATTGCATCTGAAGAGGATGTGAGG
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