mRNA_L-elsbetiae_contig1851.5384.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1851.5384.1 vs. uniprot
Match: D7FVA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVA3_ECTSI) HSP 1 Score: 501 bits (1290), Expect = 2.140e-172 Identity = 284/433 (65.59%), Postives = 317/433 (73.21%), Query Frame = 1 Query: 187 MCLWAAATEAAPRVGKAQTAD---ELDDVEEFESELDAMVVEGDA----PSEEHPSPRRLSLLESNVNILEQDCNVAQLFVDAASSRKDHLYLGLDISTRSTGYAVLRPSAAAAAAATMAPAPGDSGSEEHAGGDACRPDPERAGWLRDAGEAHLVEWGYISGNGKDGKKGDEVDVGVIVEDALIRVAARCGRGSIGGSGDGYEAASPSSXXXXXXXXXSLPTPSFSPEPSEHEDNHPNPVVVVGEAQGRVWVVGVEDFMRRFLPGRSNAKSIFALAQLNGIVKYACHKHLGAKASSFHPSTPRSFYGLTKNKPEDKDMKEIVHDFALSQENGALDSRYEWPLSPDGSKADASFDITDAYLIARYSWHRDVFRGSSTLGLRKTWGRKGGPFAESFRSLHSKKLQAAEDKSVQMFVNGDMPAARGKKKLKPMTE 1464 MCLWAAAT+AAPR A E DDVE FE+ELDAMVVEGD P SPRRLSLLESNVNILEQDC VAQLFVDAA+SRKD+LYLGLDIST+STGYAVLRPS A TM+ G S++ + D R G LR+ GEA+LVEWG ISGNG DGKKGDE+DVG+IVE+ L++VA RC R S GG AAS ++ + +D P + +GRVWVVGVEDFMRRFLPGRSNAKSIFALAQLNGI+KYACHKHLG KA+SFHPSTPRSFY LTKNKPE KDMK+IVHDFALSQENGAL SRYEWPLSPDGSKADAS+DITDAYLIARYSWHRDVFR + K FAESFRSLHSK L AAE ++++MF+NGDMPAA+GKKKLKPMTE Sbjct: 1 MCLWAAATQAAPRRADKPAAAAGVEEDDVEVFENELDAMVVEGDGDDATPEGRPSSPRRLSLLESNVNILEQDCKVAQLFVDAAASRKDNLYLGLDISTQSTGYAVLRPSTA-----TMSNLGGHCLSDDVSHAD-------RPGLLREMGEANLVEWGCISGNGSDGKKGDEIDVGIIVEEVLVQVAERCVR-STGGKAP---AASVTTSELEESVGSGCAVKGYKKTGDAGDDLQPE-----ADDKGRVWVVGVEDFMRRFLPGRSNAKSIFALAQLNGIIKYACHKHLGVKANSFHPSTPRSFYSLTKNKPEGKDMKQIVHDFALSQENGALHSRYEWPLSPDGSKADASYDITDAYLIARYSWHRDVFRAVADNSAAKD------RFAESFRSLHSKNLLAAEKRAIEMFINGDMPAAKGKKKLKPMTE 406
BLAST of mRNA_L-elsbetiae_contig1851.5384.1 vs. uniprot
Match: A0A484DU82_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DU82_BRELC) HSP 1 Score: 91.3 bits (225), Expect = 1.100e-16 Identity = 55/126 (43.65%), Postives = 68/126 (53.97%), Query Frame = 1 Query: 919 WVVGVEDFMRRFLPGRSNAKSIFALAQLNGIVKYACHKHLGAKASSFHPSTPRSFYGLTKNKPEDKD--MKEIVHDFALSQENG---ALDSRYEWPLSPD------GSKADASFDITDAYLIARYS 1263 W +G+E FMR FL GR N IF LAQLNGIV YAC K G HPS RSF+GL K + K+ +K +V F QE A + P G+ AD++FDI DAY+IA Y+ Sbjct: 101 WTIGIEAFMRMFLSGRFNNAGIFQLAQLNGIVSYACWKRFGVLPLHTHPSAARSFFGLRKRMKKSKNDSIKNVVMTFLEQQEPELTLAAGRGSDTTALPTFQRLRTGALADSAFDIADAYVIAAYT 226
BLAST of mRNA_L-elsbetiae_contig1851.5384.1 vs. uniprot
Match: A0A662WXG8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WXG8_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.440e-15 Identity = 55/134 (41.04%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 901 EAQGRVWVVGVEDFMRRFLPGRSNAKSIFALAQLNGIVKYACHKHLGAKASSFHPSTPRSFYGLT----KNKPEDKDMKEIVHDF------ALSQENGALDSRYEWPL---SPDGSKADASFDITDAYLIARYS 1263 E QG W+VG+E FMR F G+ + IF LAQLNGIV YAC K A + HPS R F+GL+ + + +K+ V F AL++ G S E P + G AD++FDI DAY+IA Y+ Sbjct: 105 EEQGTEWLVGIEAFMRLFRVGQFHNAGIFQLAQLNGIVSYACWKRFEALPTHTHPSAARGFFGLSAPSSSSVSKKSSIKQQVMSFFAAQEPALTRAAGEAASSLELPRFERTRSGVLADSAFDIADAYVIAAYT 238
BLAST of mRNA_L-elsbetiae_contig1851.5384.1 vs. uniprot
Match: A0A0P1AWW1_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWW1_PLAHL) HSP 1 Score: 86.3 bits (212), Expect = 5.270e-15 Identity = 52/127 (40.94%), Postives = 70/127 (55.12%), Query Frame = 1 Query: 919 WVVGVEDFMRRFLPGRSNAKSIFALAQLNGIVKYACHKHLGAKASSFHPSTPRSFYGLTKNKPEDKD--MKEIVHDFALSQEN-----GALDSRYE-----WPLSPDGSKADASFDITDAYLIARYS 1263 W+VG+E FMR F GR + IF LAQLNGIV +AC K G+ HPS RSF+GL + K +K V F QE + DS+ + + +GS AD++FDI DAY++A Y+ Sbjct: 101 WIVGIEAFMRMFRSGRYHNAGIFQLAQLNGIVSFACWKRFGSLPLHTHPSAARSFHGLCTSSVNSKSGSIKHQVMTFLKQQEPELTQAASCDSKSSCVFPTFQRNRNGSLADSAFDIADAYVMASYT 227
BLAST of mRNA_L-elsbetiae_contig1851.5384.1 vs. uniprot
Match: H3GN07_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GN07_PHYRM) HSP 1 Score: 85.1 bits (209), Expect = 1.010e-14 Identity = 56/134 (41.79%), Postives = 71/134 (52.99%), Query Frame = 1 Query: 901 EAQGRV-WVVGVEDFMRRFLPGRSNAKSIFALAQLNGIVKYACHKHLGAKASSFHPSTPRSFYGLTKNKPEDK--DMKEIVHDFALSQE-------NGALDSRYEWPLSP---DGSKADASFDITDAYLIARYS 1263 + QGRV WVVG+E FMR F GR + IF LAQLNGIV +AC K HPS R F+GL+ K +K V +F QE G L++ P G+ AD++FDI DAY+IA Y+ Sbjct: 101 QQQGRVQWVVGIEAFMRMFRSGRFHNAGIFQLAQLNGIVSFACWKRFDVLPLHTHPSAARGFFGLSAPTMTSKKNSIKHQVMNFLEQQEPELTQAAGGELEAPEALPSFERMRTGALADSAFDIADAYVIAAYT 234
BLAST of mRNA_L-elsbetiae_contig1851.5384.1 vs. uniprot
Match: A0A2P4X2I3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X2I3_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.660e-14 Identity = 51/123 (41.46%), Postives = 64/123 (52.03%), Query Frame = 1 Query: 919 WVVGVEDFMRRFLPGRSNAKSIFALAQLNGIVKYACHKHLGAKASSFHPSTPRSFYGLTKNKPEDK--DMKEIVHDFALSQENGALDSRYEWPLSPD------GSKADASFDITDAYLIARYS 1263 WVVG+E FMR F GR + IF LAQLNGIV +AC K HPS R F+GL+ +K +K V +F QE E P G+ AD++FDI DAY+IA Y+ Sbjct: 104 WVVGIEAFMRMFRSGRFHNAGIFQLAQLNGIVSFACWKRFNVLPLHTHPSAARGFFGLSAPTTSNKKTSIKHQVMNFLEQQEPEVTQGTDESDALPKLETMRTGALADSAFDIADAYVIAAYT 226
BLAST of mRNA_L-elsbetiae_contig1851.5384.1 vs. uniprot
Match: A0A329SM58_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SM58_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 2.070e-14 Identity = 50/129 (38.76%), Postives = 66/129 (51.16%), Query Frame = 1 Query: 919 WVVGVEDFMRRFLPGRSNAKSIFALAQLNGIVKYACHKHLGAKASSFHPSTPRSFYGLTKNKPEDKDMKEIVHDFALS--------------QENGALDSRYEWPLSPDGSKADASFDITDAYLIARYS 1263 WVVG+E FMR F GR + IF LAQLNGIV +AC K A HPS R F+GL+ P K MK + +S Q+ ++ + G+ AD++FDI DAY+IA Y+ Sbjct: 86 WVVGIEAFMRMFRSGRFHNAGIFQLAQLNGIVSFACWKRFSALPLHTHPSAARGFFGLSA--PTTKSMKNSIKHQVMSFLKQQEPELSQAAGQDTKTSEALPSFERMRTGALADSAFDIADAYVIAAYT 212
BLAST of mRNA_L-elsbetiae_contig1851.5384.1 vs. uniprot
Match: W2PUX3_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PUX3_PHYPN) HSP 1 Score: 82.8 bits (203), Expect = 3.210e-14 Identity = 49/127 (38.58%), Postives = 66/127 (51.97%), Query Frame = 1 Query: 919 WVVGVEDFMRRFLPGRSNAKSIFALAQLNGIVKYACHKHLGAKASSFHPSTPRSFYGLTK--NKPEDKDMKEIVHDFALSQENGALDSRYEWPLSPD----------GSKADASFDITDAYLIARYS 1263 WVVG+E FMR F GR + IF LAQLNGIV +AC K HPS R F+GL+ K + +K V F QE + ++ + + G+ AD++FDI DAY+IA Y+ Sbjct: 107 WVVGIEAFMRMFRSGRFHNAGIFQLAQLNGIVSFACWKRFNVLPLHTHPSAARGFFGLSAPTTKSKKNSVKHQVMGFLEKQEPELTQAAGQYTKTSEALPSFERMRTGALADSAFDIADAYVIAAYT 233
BLAST of mRNA_L-elsbetiae_contig1851.5384.1 vs. uniprot
Match: A0A6A4CR17_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CR17_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 4.960e-14 Identity = 53/129 (41.09%), Postives = 67/129 (51.94%), Query Frame = 1 Query: 919 WVVGVEDFMRRFLPGRSNAKSIFALAQLNGIVKYACHKHLGAKASSFHPSTPRSFYGLTKNKPEDK--DMKEIVHDFALSQE-------NGALDSRYEWPLSP-----DGSKADASFDITDAYLIARYS 1263 WVVG+E FMR F GR + IF LAQLNGIV YAC + A HPS RSF+GL+ K +K+ V F QE D++ L G+ AD++FDI DAY+IA Y+ Sbjct: 107 WVVGIEAFMRMFRSGRFHNAGIFQLAQLNGIVSYACWRRFDALPLHTHPSAARSFFGLSAPTASSKKSSIKQQVMGFLEQQEPELTNAAGAGQDTKASAALPSFERMRTGALADSAFDIVDAYVIAAYT 235
BLAST of mRNA_L-elsbetiae_contig1851.5384.1 vs. uniprot
Match: A0A425CN40_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CN40_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 9.010e-14 Identity = 49/124 (39.52%), Postives = 65/124 (52.42%), Query Frame = 1 Query: 919 WVVGVEDFMRRFLPGRSNAKSIFALAQLNGIVKYACHKHLGAKASSFHPSTPRSFYGLTKNKPEDK--DMKEIVHDF-------ALSQENGALDSRYEWPLSPDGSKADASFDITDAYLIARYS 1263 WVVG+E FMR F GR + IF LAQLNGIV +AC K HPS R F+GL+ K +K V +F Q++ L++ G+ AD++FDI DAY+IA Y+ Sbjct: 109 WVVGIEAFMRMFRSGRFHNAGIFQLAQLNGIVSFACWKRFNVLPLHTHPSAARGFFGLSAPSGSSKTNSIKHQVMEFLEHQEPDVAGQQDEGLEALPTLERMRTGALADSAFDIADAYVIAAYT 232 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1851.5384.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1851.5384.1 >prot_L-elsbetiae_contig1851.5384.1 ID=prot_L-elsbetiae_contig1851.5384.1|Name=mRNA_L-elsbetiae_contig1851.5384.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=485bp MLGAFRASPSACSLAFGVPRFLVSCAFHRGVRTCHSTIEGLPAGCARSFQback to top mRNA from alignment at L-elsbetiae_contig1851:957..8594- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1851.5384.1 ID=mRNA_L-elsbetiae_contig1851.5384.1|Name=mRNA_L-elsbetiae_contig1851.5384.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7638bp|location=Sequence derived from alignment at L-elsbetiae_contig1851:957..8594- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1851:957..8594- >mRNA_L-elsbetiae_contig1851.5384.1 ID=mRNA_L-elsbetiae_contig1851.5384.1|Name=mRNA_L-elsbetiae_contig1851.5384.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2910bp|location=Sequence derived from alignment at L-elsbetiae_contig1851:957..8594- (Laminarionema elsbetiae ELsaHSoW15)back to top |